RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CENPKQ9BS16 269 aa17.76■□□□□ 0.43
SHANK1-204ENST00000391814 PNMA6EA0A0J9YXQ4 647 aa17.76■□□□□ 0.43
SHANK1-204ENST00000391814 PPIP5K1Q6PFW1 1433 aa17.76■□□□□ 0.43
SHANK1-204ENST00000391814 EIF4E1BA6NMX2 242 aaKnown RBP17.76■□□□□ 0.43
SHANK1-204ENST00000391814 IL9RQ01113 521 aa17.76■□□□□ 0.43
SHANK1-204ENST00000391814 SNX29Q8TEQ0 813 aa17.76■□□□□ 0.43
SHANK1-204ENST00000391814 HAUS7Q99871 368 aa17.76■□□□□ 0.43
SHANK1-204ENST00000391814 CD2BP2O95400 341 aaKnown RBP17.75■□□□□ 0.43
SHANK1-204ENST00000391814 BCRP11274 1271 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 SLC7A5Q01650 507 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 PIP4K2CQ8TBX8 421 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 E7EWF7 191 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 PDE6BP35913 854 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 NAP1L4Q99733 375 aaKnown RBP17.75■□□□□ 0.43
SHANK1-204ENST00000391814 JAG2Q9Y219 1238 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 CD2APQ9Y5K6 639 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 RBM6P78332 1123 aaKnown RBP17.75■□□□□ 0.43
SHANK1-204ENST00000391814 PTH1RQ03431 593 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 ANKRD20A4Q4UJ75 823 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 ANKRD20A8PQ5CZ79 823 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 ANKRD20A2Q5SQ80 823 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 ANKRD20A1Q5TYW2 823 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 HIBCHQ6NVY1 386 aaPredicted RBP17.75■□□□□ 0.43
SHANK1-204ENST00000391814 SPTLC3Q9NUV7 552 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 DAPK3O43293 454 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 ATF2P15336 505 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 IQCDQ96DY2 449 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 SAAL1Q96ER3 474 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 RIMS2Q9UQ26 1411 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 SP4Q02446 784 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 TTC6Q86TZ1 520 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 ATP2A3Q93084 1043 aa17.75■□□□□ 0.43
SHANK1-204ENST00000391814 MRPL44Q9H9J2 332 aaKnown RBP17.75■□□□□ 0.43
SHANK1-204ENST00000391814 VPS54Q9P1Q0 977 aa17.74■□□□□ 0.43
SHANK1-204ENST00000391814 ACRBPQ8NEB7 543 aa17.74■□□□□ 0.43
SHANK1-204ENST00000391814 TEX13AQ9BXU3 409 aaPredicted RBP17.74■□□□□ 0.43
SHANK1-204ENST00000391814 CXCR5P32302 372 aa17.74■□□□□ 0.43
SHANK1-204ENST00000391814 EHHADHQ08426 723 aa17.74■□□□□ 0.43
SHANK1-204ENST00000391814 TBC1D1Q86TI0 1168 aaPredicted RBP17.74■□□□□ 0.43
SHANK1-204ENST00000391814 SUFUQ9UMX1 484 aa17.74■□□□□ 0.43
SHANK1-204ENST00000391814 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.74■□□□□ 0.43
SHANK1-204ENST00000391814 MYSM1Q5VVJ2 828 aa17.74■□□□□ 0.43
SHANK1-204ENST00000391814 DCUN1D2Q6PH85 259 aa17.74■□□□□ 0.43
SHANK1-204ENST00000391814 TAB3Q8N5C8 712 aaPredicted RBP17.74■□□□□ 0.43
SHANK1-204ENST00000391814 IQGAP2Q13576 1575 aa17.74■□□□□ 0.43
SHANK1-204ENST00000391814 POC1B-GALNT4F8VUJ3 575 aa17.74■□□□□ 0.43
SHANK1-204ENST00000391814 POLR2FP61218 127 aaKnown RBP17.74■□□□□ 0.43
SHANK1-204ENST00000391814 ACTN3Q08043 901 aaPredicted RBP17.74■□□□□ 0.43
SHANK1-204ENST00000391814 HERC4Q5GLZ8 1057 aaPredicted RBP17.74■□□□□ 0.43
SHANK1-204ENST00000391814 CCDC84Q86UT8 332 aaPredicted RBP17.74■□□□□ 0.43
SHANK1-204ENST00000391814 LRGUKQ96M69 825 aa17.74■□□□□ 0.43
SHANK1-204ENST00000391814 HEXIM1O94992 359 aaKnown RBP17.73■□□□□ 0.43
SHANK1-204ENST00000391814 CALCRLQ16602 461 aa17.73■□□□□ 0.43
SHANK1-204ENST00000391814 MYCT1Q8N699 235 aa17.73■□□□□ 0.43
SHANK1-204ENST00000391814 YY1AP1Q9H869 796 aa17.73■□□□□ 0.43
SHANK1-204ENST00000391814 SNAPC4Q5SXM2 1469 aa17.73■□□□□ 0.43
SHANK1-204ENST00000391814 MOCS3O95396 460 aa17.73■□□□□ 0.43
SHANK1-204ENST00000391814 LINS1Q8NG48 757 aa17.73■□□□□ 0.43
SHANK1-204ENST00000391814 NSFL1CQ9UNZ2 370 aaKnown RBP17.73■□□□□ 0.43
SHANK1-204ENST00000391814 NR1D1P20393 614 aa17.73■□□□□ 0.43
SHANK1-204ENST00000391814 BSPRYQ5W0U4 402 aa17.73■□□□□ 0.43
SHANK1-204ENST00000391814 TXLNGQ9NUQ3 528 aa17.73■□□□□ 0.43
SHANK1-204ENST00000391814 EVI5O60447 810 aa17.73■□□□□ 0.43
SHANK1-204ENST00000391814 PDHA1P08559 390 aa17.73■□□□□ 0.43
SHANK1-204ENST00000391814 NLRP7Q8WX94 980 aa17.73■□□□□ 0.43
SHANK1-204ENST00000391814 CTNND1O60716 968 aaKnown RBP17.73■□□□□ 0.43
SHANK1-204ENST00000391814 CMTR1Q8N1G2 835 aaKnown RBP17.72■□□□□ 0.43
SHANK1-204ENST00000391814 PDCD7Q8N8D1 485 aaKnown RBP17.72■□□□□ 0.43
SHANK1-204ENST00000391814 NGLY1Q96IV0 654 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 IFT122Q9HBG6 1241 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 TYW1Q9NV66 732 aaKnown RBP17.72■□□□□ 0.43
SHANK1-204ENST00000391814 GPAA1O43292 621 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 COPB1P53618 953 aaKnown RBP17.72■□□□□ 0.43
SHANK1-204ENST00000391814 KCNV2Q8TDN2 545 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 ANTXR1Q9H6X2 564 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 LRWD1Q9UFC0 647 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 TIMM10P62072 90 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 CEP70Q8NHQ1 597 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 NOP53Q9NZM5 478 aaKnown RBP17.72■□□□□ 0.43
SHANK1-204ENST00000391814 ATP8A1Q9Y2Q0 1164 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 MAP3K5Q99683 1374 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 TMED2Q15363 201 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 AKAP4Q5JQC9 854 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 DBNDD2Q9BQY9 259 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 NOVA2Q9UNW9 492 aaKnown RBP17.72■□□□□ 0.43
SHANK1-204ENST00000391814 SLC4A7Q9Y6M7 1214 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 SART1O43290 800 aaKnown RBP17.72■□□□□ 0.43
SHANK1-204ENST00000391814 DNM2P50570 870 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 SPATA1Q5VX52 437 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 HAUS3Q68CZ6 603 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 ANKRD13CQ8N6S4 541 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 RAB20Q9NX57 234 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 PHF8Q9UPP1 1060 aa17.72■□□□□ 0.43
SHANK1-204ENST00000391814 GNA14O95837 355 aa17.71■□□□□ 0.43
SHANK1-204ENST00000391814 CMA1P23946 247 aa17.71■□□□□ 0.43
SHANK1-204ENST00000391814 ANGPTL2Q9UKU9 493 aa17.71■□□□□ 0.43
SHANK1-204ENST00000391814 B4DLN1 442 aa17.71■□□□□ 0.43
SHANK1-204ENST00000391814 KIF1CO43896 1103 aaKnown RBP17.71■□□□□ 0.43
SHANK1-204ENST00000391814 INPP1P49441 399 aa17.71■□□□□ 0.43
SHANK1-204ENST00000391814 PTPRKQ15262 1439 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms