RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 RIOX1Q9H6W3 641 aa28.36■■■□□ 2.13
ECHDC3-201ENST00000379215 FRMPD2Q68DX3 1309 aaPredicted RBP28.35■■■□□ 2.13
ECHDC3-201ENST00000379215 hCG_1984214I3L0E3 225 aa28.35■■■□□ 2.13
ECHDC3-201ENST00000379215 MMP1P03956 469 aa28.35■■■□□ 2.13
ECHDC3-201ENST00000379215 GNL2Q13823 731 aaKnown RBP28.35■■■□□ 2.13
ECHDC3-201ENST00000379215 ZNF713Q8N859 430 aaPredicted RBP28.35■■■□□ 2.13
ECHDC3-201ENST00000379215 BRMS1Q9HCU9 246 aa28.35■■■□□ 2.13
ECHDC3-201ENST00000379215 CYTH3O43739 400 aa28.34■■■□□ 2.13
ECHDC3-201ENST00000379215 NDUFB10O96000 172 aa28.34■■■□□ 2.13
ECHDC3-201ENST00000379215 KIF23Q02241 960 aaPredicted RBP28.34■■■□□ 2.13
ECHDC3-201ENST00000379215 SCYL3Q8IZE3 742 aa28.34■■■□□ 2.13
ECHDC3-201ENST00000379215 UTRNP46939 3433 aa28.34■■■□□ 2.13
ECHDC3-201ENST00000379215 OTUD7BQ6GQQ9 843 aa28.33■■■□□ 2.13
ECHDC3-201ENST00000379215 CCDC148Q8NFR7 591 aa28.33■■■□□ 2.13
ECHDC3-201ENST00000379215 WRNIP1Q96S55 665 aa28.33■■■□□ 2.13
ECHDC3-201ENST00000379215 PICK1Q9NRD5 415 aa28.33■■■□□ 2.13
ECHDC3-201ENST00000379215 A0A1W2PRG0 241 aa28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 UBE2Q2LH0YL09 131 aa28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 RAD21O60216 631 aa28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 NF2P35240 595 aa28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 CCDC12Q8WUD4 166 aaPredicted RBP28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 ZNF396Q96N95 335 aaPredicted RBP28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 AS3MTQ9HBK9 375 aa28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 GPCPD1Q9NPB8 672 aa28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 CFAP45Q9UL16 551 aa28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 MYH6P13533 1939 aa28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 BMP3P12645 472 aa28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 CALML3P27482 149 aa28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 RASGRP2Q7LDG7 609 aa28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 KLRG1Q96E93 195 aa28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 FOXP1Q9H334 677 aaPredicted RBP28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 VCPKMTQ9H867 229 aa28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 SSC5DA1L4H1 1573 aa28.32■■■□□ 2.12
ECHDC3-201ENST00000379215 PPP1R12BO60237 982 aaPredicted RBP28.31■■■□□ 2.12
ECHDC3-201ENST00000379215 DNM1Q05193 864 aaKnown RBP28.31■■■□□ 2.12
ECHDC3-201ENST00000379215 FOXD4L6Q3SYB3 417 aaPredicted RBP28.31■■■□□ 2.12
ECHDC3-201ENST00000379215 NOL9Q5SY16 702 aaKnown RBP28.31■■■□□ 2.12
ECHDC3-201ENST00000379215 PRAMEF18Q5VWM3 479 aa28.31■■■□□ 2.12
ECHDC3-201ENST00000379215 FOXD4L3Q6VB84 417 aaPredicted RBP28.31■■■□□ 2.12
ECHDC3-201ENST00000379215 FEZ1Q99689 392 aa28.31■■■□□ 2.12
ECHDC3-201ENST00000379215 PHF20Q9BVI0 1012 aa28.31■■■□□ 2.12
ECHDC3-201ENST00000379215 SCAND2PQ9GZW5 306 aaPredicted RBP28.31■■■□□ 2.12
ECHDC3-201ENST00000379215 GJB4Q9NTQ9 266 aa28.31■■■□□ 2.12
ECHDC3-201ENST00000379215 VPS54Q9P1Q0 977 aa28.31■■■□□ 2.12
ECHDC3-201ENST00000379215 ISY1Q9ULR0 285 aaKnown RBP28.31■■■□□ 2.12
ECHDC3-201ENST00000379215 ATAD5Q96QE3 1844 aa28.3■■■□□ 2.12
ECHDC3-201ENST00000379215 hCG_1642624A0A1W2PR95 340 aa28.3■■■□□ 2.12
ECHDC3-201ENST00000379215 NCLP19338 710 aaKnown RBP28.3■■■□□ 2.12
ECHDC3-201ENST00000379215 U2AF2P26368 475 aaKnown RBP eCLIP28.3■■■□□ 2.12
ECHDC3-201ENST00000379215 ECE1P42892 770 aa28.3■■■□□ 2.12
ECHDC3-201ENST00000379215 NBR1Q14596 966 aa28.3■■■□□ 2.12
ECHDC3-201ENST00000379215 SLC35G1Q2M3R5 365 aa28.3■■■□□ 2.12
ECHDC3-201ENST00000379215 EAPPQ56P03 285 aaPredicted RBP28.3■■■□□ 2.12
ECHDC3-201ENST00000379215 GALNT17Q6IS24 598 aa28.3■■■□□ 2.12
ECHDC3-201ENST00000379215 KCTD1Q719H9 257 aa28.3■■■□□ 2.12
ECHDC3-201ENST00000379215 TMEM87AQ8NBN3 555 aa28.3■■■□□ 2.12
ECHDC3-201ENST00000379215 ACER1Q8TDN7 264 aa28.3■■■□□ 2.12
ECHDC3-201ENST00000379215 DOCK1Q14185 1865 aa28.29■■■□□ 2.12
ECHDC3-201ENST00000379215 ADM5C9JUS6 153 aa28.29■■■□□ 2.12
ECHDC3-201ENST00000379215 INPP5BP32019 993 aa28.29■■■□□ 2.12
ECHDC3-201ENST00000379215 DIS3L2Q8IYB7 885 aaKnown RBP28.29■■■□□ 2.12
ECHDC3-201ENST00000379215 LPAR1Q92633 364 aa28.29■■■□□ 2.12
ECHDC3-201ENST00000379215 UBA5Q9GZZ9 404 aa28.29■■■□□ 2.12
ECHDC3-201ENST00000379215 BARHL2Q9NY43 387 aa28.29■■■□□ 2.12
ECHDC3-201ENST00000379215 POTECB2RU33 542 aa28.29■■■□□ 2.12
ECHDC3-201ENST00000379215 KRT2P35908 639 aa28.29■■■□□ 2.12
ECHDC3-201ENST00000379215 WDR18Q9BV38 432 aa28.29■■■□□ 2.12
ECHDC3-201ENST00000379215 KIAA1683Q9H0B3 1180 aa28.29■■■□□ 2.12
ECHDC3-201ENST00000379215 USP14P54578 494 aa28.28■■■□□ 2.12
ECHDC3-201ENST00000379215 PIBF1Q8WXW3 757 aa28.28■■■□□ 2.12
ECHDC3-201ENST00000379215 KCNJ14Q9UNX9 436 aa28.28■■■□□ 2.12
ECHDC3-201ENST00000379215 NLRP5P59047 1200 aa28.27■■■□□ 2.12
ECHDC3-201ENST00000379215 SKOR2Q2VWA4 1001 aaPredicted RBP28.27■■■□□ 2.12
ECHDC3-201ENST00000379215 BTNL9Q6UXG8 535 aa28.27■■■□□ 2.12
ECHDC3-201ENST00000379215 HEATR3Q7Z4Q2 680 aa28.27■■■□□ 2.12
ECHDC3-201ENST00000379215 HOMER1Q86YM7 354 aa28.27■■■□□ 2.12
ECHDC3-201ENST00000379215 ADGRF4Q8IZF3 695 aa28.27■■■□□ 2.12
ECHDC3-201ENST00000379215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.27■■■□□ 2.12
ECHDC3-201ENST00000379215 CNPY2Q9Y2B0 182 aa28.27■■■□□ 2.12
ECHDC3-201ENST00000379215 PNMA6FA0A0J9YX94 578 aa28.26■■■□□ 2.11
ECHDC3-201ENST00000379215 IREB2P48200 963 aaKnown RBP28.26■■■□□ 2.11
ECHDC3-201ENST00000379215 PPP1R18Q6NYC8 613 aa28.26■■■□□ 2.11
ECHDC3-201ENST00000379215 NOSTRINQ8IVI9 506 aa28.26■■■□□ 2.11
ECHDC3-201ENST00000379215 MTMR8Q96EF0 704 aa28.26■■■□□ 2.11
ECHDC3-201ENST00000379215 PIGSQ96S52 555 aa28.26■■■□□ 2.11
ECHDC3-201ENST00000379215 JMJD4Q9H9V9 463 aa28.26■■■□□ 2.11
ECHDC3-201ENST00000379215 VAT1LQ9HCJ6 419 aa28.26■■■□□ 2.11
ECHDC3-201ENST00000379215 PLA2G6O60733 806 aa28.25■■■□□ 2.11
ECHDC3-201ENST00000379215 VEGFAP15692 232 aaPredicted RBP28.25■■■□□ 2.11
ECHDC3-201ENST00000379215 MYSM1Q5VVJ2 828 aa28.25■■■□□ 2.11
ECHDC3-201ENST00000379215 WWC2Q6AWC2 1192 aa28.25■■■□□ 2.11
ECHDC3-201ENST00000379215 TTBK2Q6IQ55 1244 aa28.25■■■□□ 2.11
ECHDC3-201ENST00000379215 CDCA5Q96FF9 252 aa28.25■■■□□ 2.11
ECHDC3-201ENST00000379215 CPVLQ9H3G5 476 aa28.25■■■□□ 2.11
ECHDC3-201ENST00000379215 KIF28PB7ZC32 967 aa28.25■■■□□ 2.11
ECHDC3-201ENST00000379215 STXBP3O00186 592 aa28.25■■■□□ 2.11
ECHDC3-201ENST00000379215 ZBTB5O15062 677 aa28.25■■■□□ 2.11
ECHDC3-201ENST00000379215 FIBPO43427 364 aa28.25■■■□□ 2.11
ECHDC3-201ENST00000379215 PTPRAP18433 802 aa28.25■■■□□ 2.11
ECHDC3-201ENST00000379215 STAT2P52630 851 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms