RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 SPICE1Q8N0Z3 855 aa18.43■□□□□ 0.54
CLCN6-207ENST00000376497 MAML3Q96JK9 1138 aa18.43■□□□□ 0.54
CLCN6-207ENST00000376497 YTHDC1Q96MU7 727 aaKnown RBP18.43■□□□□ 0.54
CLCN6-207ENST00000376497 PRKAG2Q9UGJ0 569 aa18.43■□□□□ 0.54
CLCN6-207ENST00000376497 USP17L12C9JPN9 530 aa18.42■□□□□ 0.54
CLCN6-207ENST00000376497 KBTBD13C9JR72 458 aa18.42■□□□□ 0.54
CLCN6-207ENST00000376497 USP17L21D6R901 530 aa18.42■□□□□ 0.54
CLCN6-207ENST00000376497 TMEM132BQ14DG7 1078 aa18.42■□□□□ 0.54
CLCN6-207ENST00000376497 SNX17Q15036 470 aa18.42■□□□□ 0.54
CLCN6-207ENST00000376497 PRAMEF19Q5SWL8 479 aa18.42■□□□□ 0.54
CLCN6-207ENST00000376497 ANO1Q5XXA6 986 aa18.42■□□□□ 0.54
CLCN6-207ENST00000376497 AMOTL1Q8IY63 956 aa18.42■□□□□ 0.54
CLCN6-207ENST00000376497 GREB1LQ9C091 1923 aaPredicted RBP18.41■□□□□ 0.54
CLCN6-207ENST00000376497 CYP2D7A0A087X1C5 515 aa18.41■□□□□ 0.54
CLCN6-207ENST00000376497 FCER1AP12319 257 aa18.41■□□□□ 0.54
CLCN6-207ENST00000376497 EEF2P13639 858 aaKnown RBP18.41■□□□□ 0.54
CLCN6-207ENST00000376497 CHMP4BQ9H444 224 aaKnown RBP18.41■□□□□ 0.54
CLCN6-207ENST00000376497 KANSL2Q9H9L4 492 aa18.41■□□□□ 0.54
CLCN6-207ENST00000376497 NRBP1Q9UHY1 535 aa18.41■□□□□ 0.54
CLCN6-207ENST00000376497 ATP11BQ9Y2G3 1177 aa18.41■□□□□ 0.54
CLCN6-207ENST00000376497 SMARCA5O60264 1052 aaPredicted RBP18.4■□□□□ 0.54
CLCN6-207ENST00000376497 CHGBP05060 677 aa18.4■□□□□ 0.54
CLCN6-207ENST00000376497 LRRC41Q15345 812 aa18.4■□□□□ 0.54
CLCN6-207ENST00000376497 C1orf53Q5VUE5 145 aa18.4■□□□□ 0.54
CLCN6-207ENST00000376497 CTR9Q6PD62 1173 aa18.4■□□□□ 0.54
CLCN6-207ENST00000376497 RIOX2Q8IUF8 465 aa18.4■□□□□ 0.54
CLCN6-207ENST00000376497 DDRGK1Q96HY6 314 aa18.4■□□□□ 0.54
CLCN6-207ENST00000376497 DIS3Q9Y2L1 958 aaKnown RBP18.4■□□□□ 0.54
CLCN6-207ENST00000376497 SLC4A4Q9Y6R1 1079 aa18.4■□□□□ 0.54
CLCN6-207ENST00000376497 ZSCAN25Q6NSZ9 544 aa18.39■□□□□ 0.53
CLCN6-207ENST00000376497 MMP19Q99542 508 aa18.39■□□□□ 0.53
CLCN6-207ENST00000376497 PUS7LQ9H0K6 701 aaKnown RBP18.39■□□□□ 0.53
CLCN6-207ENST00000376497 ZNF792Q3KQV3 632 aa18.38■□□□□ 0.53
CLCN6-207ENST00000376497 FAM47AQ5JRC9 791 aa18.38■□□□□ 0.53
CLCN6-207ENST00000376497 SAMD1Q6SPF0 538 aaPredicted RBP18.38■□□□□ 0.53
CLCN6-207ENST00000376497 GOPCQ9HD26 462 aa18.38■□□□□ 0.53
CLCN6-207ENST00000376497 FBXO28Q9NVF7 368 aa18.38■□□□□ 0.53
CLCN6-207ENST00000376497 PPP1R9AQ9ULJ8 1098 aa18.38■□□□□ 0.53
CLCN6-207ENST00000376497 VWA5AO00534 786 aa18.37■□□□□ 0.53
CLCN6-207ENST00000376497 STAT3P40763 770 aa18.37■□□□□ 0.53
CLCN6-207ENST00000376497 ADCYAP1R1P41586 468 aa18.37■□□□□ 0.53
CLCN6-207ENST00000376497 TRIM60Q495X7 471 aa18.37■□□□□ 0.53
CLCN6-207ENST00000376497 REPS2Q8NFH8 660 aa18.37■□□□□ 0.53
CLCN6-207ENST00000376497 GUCD1Q96NT3 240 aa18.37■□□□□ 0.53
CLCN6-207ENST00000376497 TINF2Q9BSI4 451 aa18.37■□□□□ 0.53
CLCN6-207ENST00000376497 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.37■□□□□ 0.53
CLCN6-207ENST00000376497 ARPP21Q9UBL0 812 aaPredicted RBP18.37■□□□□ 0.53
CLCN6-207ENST00000376497 ZNF214Q9UL59 606 aaPredicted RBP18.37■□□□□ 0.53
CLCN6-207ENST00000376497 MYH4Q9Y623 1939 aa18.37■□□□□ 0.53
CLCN6-207ENST00000376497 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
CLCN6-207ENST00000376497 PGK2P07205 417 aa18.36■□□□□ 0.53
CLCN6-207ENST00000376497 COPB2P35606 906 aa18.36■□□□□ 0.53
CLCN6-207ENST00000376497 KCTD2Q14681 263 aa18.36■□□□□ 0.53
CLCN6-207ENST00000376497 SHHQ15465 462 aa18.36■□□□□ 0.53
CLCN6-207ENST00000376497 SBK1Q52WX2 424 aa18.36■□□□□ 0.53
CLCN6-207ENST00000376497 ROBO3Q96MS0 1386 aa18.36■□□□□ 0.53
CLCN6-207ENST00000376497 LRRCC1Q9C099 1032 aa18.36■□□□□ 0.53
CLCN6-207ENST00000376497 PDLIM7Q9NR12 457 aa18.36■□□□□ 0.53
CLCN6-207ENST00000376497 PHF24Q9UPV7 400 aa18.36■□□□□ 0.53
CLCN6-207ENST00000376497 RARBP10826 455 aa18.35■□□□□ 0.53
CLCN6-207ENST00000376497 FAM83BQ5T0W9 1011 aa18.35■□□□□ 0.53
CLCN6-207ENST00000376497 BADQ92934 168 aa18.35■□□□□ 0.53
CLCN6-207ENST00000376497 FERMT2Q96AC1 680 aa18.35■□□□□ 0.53
CLCN6-207ENST00000376497 STRBPQ96SI9 672 aaKnown RBP18.35■□□□□ 0.53
CLCN6-207ENST00000376497 XPNPEP3Q9NQH7 507 aa18.35■□□□□ 0.53
CLCN6-207ENST00000376497 PRDM5Q9NQX1 630 aaPredicted RBP18.35■□□□□ 0.53
CLCN6-207ENST00000376497 LAMA2P24043 3122 aaKnown RBP18.35■□□□□ 0.53
CLCN6-207ENST00000376497 TRIM43BA6NCK2 446 aa18.34■□□□□ 0.53
CLCN6-207ENST00000376497 ZNF865P0CJ78 1059 aaPredicted RBP18.34■□□□□ 0.53
CLCN6-207ENST00000376497 C9orf50Q5SZB4 431 aa18.34■□□□□ 0.53
CLCN6-207ENST00000376497 ZNF697Q5TEC3 545 aa18.34■□□□□ 0.53
CLCN6-207ENST00000376497 GIMAP6Q6P9H5 292 aa18.34■□□□□ 0.53
CLCN6-207ENST00000376497 SH3RF1Q7Z6J0 888 aa18.34■□□□□ 0.53
CLCN6-207ENST00000376497 RNF180Q86T96 592 aa18.34■□□□□ 0.53
CLCN6-207ENST00000376497 TRIM43Q96BQ3 446 aaPredicted RBP18.34■□□□□ 0.53
CLCN6-207ENST00000376497 NYAP2Q9P242 653 aa18.34■□□□□ 0.53
CLCN6-207ENST00000376497 PCDHB15Q9Y5E8 787 aa18.34■□□□□ 0.53
CLCN6-207ENST00000376497 GSG1L2A8MUP6 293 aa18.33■□□□□ 0.52
CLCN6-207ENST00000376497 AKR1A1P14550 325 aa18.33■□□□□ 0.52
CLCN6-207ENST00000376497 TAL1P17542 331 aaPredicted RBP18.33■□□□□ 0.52
CLCN6-207ENST00000376497 RASA1P20936 1047 aa18.33■□□□□ 0.52
CLCN6-207ENST00000376497 TLE2Q04725 743 aa18.33■□□□□ 0.52
CLCN6-207ENST00000376497 MSL3Q8N5Y2 521 aaKnown RBP18.33■□□□□ 0.52
CLCN6-207ENST00000376497 TACC3Q9Y6A5 838 aa18.33■□□□□ 0.52
CLCN6-207ENST00000376497 RAD21O60216 631 aa18.32■□□□□ 0.52
CLCN6-207ENST00000376497 PGK1P00558 417 aa18.32■□□□□ 0.52
CLCN6-207ENST00000376497 RRP1P56182 461 aaKnown RBP18.32■□□□□ 0.52
CLCN6-207ENST00000376497 TSHZ3Q63HK5 1081 aa18.32■□□□□ 0.52
CLCN6-207ENST00000376497 FAM161BQ96MY7 647 aa18.32■□□□□ 0.52
CLCN6-207ENST00000376497 SLF1Q9BQI6 1058 aa18.32■□□□□ 0.52
CLCN6-207ENST00000376497 MKNK2Q9HBH9 465 aa18.32■□□□□ 0.52
CLCN6-207ENST00000376497 ECHDC1Q9NTX5 307 aa18.32■□□□□ 0.52
CLCN6-207ENST00000376497 A0A0C4DFX4 3053 aa18.32■□□□□ 0.52
CLCN6-207ENST00000376497 F5H6K3 240 aa18.31■□□□□ 0.52
CLCN6-207ENST00000376497 ATP2A1O14983 1001 aa18.31■□□□□ 0.52
CLCN6-207ENST00000376497 ADAMTS4O75173 837 aa18.31■□□□□ 0.52
CLCN6-207ENST00000376497 SMAD3P84022 425 aaKnown RBP18.31■□□□□ 0.52
CLCN6-207ENST00000376497 KLRC3Q07444 240 aa18.31■□□□□ 0.52
CLCN6-207ENST00000376497 KBTBD3Q8NAB2 608 aa18.31■□□□□ 0.52
CLCN6-207ENST00000376497 PRPF38AQ8NAV1 312 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms