RNA–Protein interactions for RNA: ENST00000373741.8

PUM1-202, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-202ENST00000373741 CCDC34Q96HJ3 373 aa13.19□□□□□ -0.3
PUM1-202ENST00000373741 PSMD14O00487 310 aa13.18□□□□□ -0.3
PUM1-202ENST00000373741 KRT2P35908 639 aa13.18□□□□□ -0.3
PUM1-202ENST00000373741 SNAP25P60880 206 aa13.18□□□□□ -0.3
PUM1-202ENST00000373741 ERCC6LQ2NKX8 1250 aa13.18□□□□□ -0.3
PUM1-202ENST00000373741 BRAPQ7Z569 592 aa13.18□□□□□ -0.3
PUM1-202ENST00000373741 RASA1P20936 1047 aa13.18□□□□□ -0.3
PUM1-202ENST00000373741 CERKLQ49MI3 558 aaPredicted RBP13.18□□□□□ -0.3
PUM1-202ENST00000373741 STYK1Q6J9G0 422 aa13.18□□□□□ -0.3
PUM1-202ENST00000373741 NOSTRINQ8IVI9 506 aa13.18□□□□□ -0.3
PUM1-202ENST00000373741 SRBD1Q8N5C6 995 aaKnown RBP13.18□□□□□ -0.3
PUM1-202ENST00000373741 PRMT6Q96LA8 375 aaPredicted RBP13.18□□□□□ -0.3
PUM1-202ENST00000373741 CTIFO43310 598 aaKnown RBP13.18□□□□□ -0.3
PUM1-202ENST00000373741 VEGFAP15692 232 aaPredicted RBP13.18□□□□□ -0.3
PUM1-202ENST00000373741 JAKMIP3Q5VZ66 844 aa13.18□□□□□ -0.3
PUM1-202ENST00000373741 NBPF11Q86T75 865 aa13.18□□□□□ -0.3
PUM1-202ENST00000373741 KCNG4Q8TDN1 519 aa13.18□□□□□ -0.3
PUM1-202ENST00000373741 FAM217BQ9NTX9 383 aaPredicted RBP13.18□□□□□ -0.3
PUM1-202ENST00000373741 RBM28Q9NW13 759 aaKnown RBP13.18□□□□□ -0.3
PUM1-202ENST00000373741 RAD51AP2Q09MP3 1159 aa13.18□□□□□ -0.3
PUM1-202ENST00000373741 STAMQ92783 540 aa13.18□□□□□ -0.3
PUM1-202ENST00000373741 TAOK3Q9H2K8 898 aa13.18□□□□□ -0.3
PUM1-202ENST00000373741 DDX60Q8IY21 1712 aaKnown RBP13.17□□□□□ -0.3
PUM1-202ENST00000373741 USP17L5A8MUK1 530 aa13.17□□□□□ -0.3
PUM1-202ENST00000373741 SHROOM1Q2M3G4 852 aaPredicted RBP13.17□□□□□ -0.3
PUM1-202ENST00000373741 CCDC84Q86UT8 332 aaPredicted RBP13.17□□□□□ -0.3
PUM1-202ENST00000373741 DRC1Q96MC2 740 aa13.17□□□□□ -0.3
PUM1-202ENST00000373741 VWA3AA6NCI4 1184 aa13.17□□□□□ -0.3
PUM1-202ENST00000373741 SYKP43405 635 aa13.17□□□□□ -0.3
PUM1-202ENST00000373741 TRIM75PA6NK02 468 aa13.17□□□□□ -0.3
PUM1-202ENST00000373741 SLC1A4P43007 532 aa13.17□□□□□ -0.3
PUM1-202ENST00000373741 AFMP43652 599 aa13.17□□□□□ -0.3
PUM1-202ENST00000373741 TROAPQ12815 778 aa13.17□□□□□ -0.3
PUM1-202ENST00000373741 STRIP1Q5VSL9 837 aa13.17□□□□□ -0.3
PUM1-202ENST00000373741 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.17□□□□□ -0.3
PUM1-202ENST00000373741 IL17RBQ9NRM6 502 aa13.17□□□□□ -0.3
PUM1-202ENST00000373741 DDX19AQ9NUU7 478 aaKnown RBP13.17□□□□□ -0.3
PUM1-202ENST00000373741 MYH2Q9UKX2 1941 aa13.17□□□□□ -0.3
PUM1-202ENST00000373741 KIF2AO00139 706 aaPredicted RBP13.16□□□□□ -0.3
PUM1-202ENST00000373741 RHBDL3P58872 404 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 USH1GQ495M9 461 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 TBC1D10BQ4KMP7 808 aaPredicted RBP13.16□□□□□ -0.3
PUM1-202ENST00000373741 PRAMEF18Q5VWM3 479 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 RTKN2Q8IZC4 609 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 CNNM3Q8NE01 707 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 PCDHB6Q9Y5E3 794 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 SCG2P13521 617 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 CDC25AP30304 524 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 NDUFA8P51970 172 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 SEC23AQ15436 765 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 SYT10Q6XYQ8 523 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 TRMT1LQ7Z2T5 733 aaKnown RBP13.16□□□□□ -0.3
PUM1-202ENST00000373741 CBX8Q9HC52 389 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 ZNF75DP51815 510 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 ZSCAN26Q16670 478 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 HSP90B2PQ58FF3 399 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 COA7Q96BR5 231 aa13.16□□□□□ -0.3
PUM1-202ENST00000373741 RRP36Q96EU6 259 aaKnown RBP13.16□□□□□ -0.3
PUM1-202ENST00000373741 NUP88Q99567 741 aaPredicted RBP13.16□□□□□ -0.3
PUM1-202ENST00000373741 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.16□□□□□ -0.33e-6■■□□□ 13.5
PUM1-202ENST00000373741 DDTLA6NHG4 134 aaPredicted RBP13.15□□□□□ -0.3
PUM1-202ENST00000373741 ORC4O43929 436 aa13.15□□□□□ -0.3
PUM1-202ENST00000373741 WDHD1O75717 1129 aaPredicted RBP13.15□□□□□ -0.3
PUM1-202ENST00000373741 MMP1P03956 469 aa13.15□□□□□ -0.3
PUM1-202ENST00000373741 TNNI2P48788 182 aa13.15□□□□□ -0.3
PUM1-202ENST00000373741 PPP4CP60510 307 aa13.15□□□□□ -0.3
PUM1-202ENST00000373741 NTRK3Q16288 839 aa13.15□□□□□ -0.3
PUM1-202ENST00000373741 LETM2Q2VYF4 491 aa13.15□□□□□ -0.3
PUM1-202ENST00000373741 TMTC3Q6ZXV5 915 aa13.15□□□□□ -0.3
PUM1-202ENST00000373741 PIGSQ96S52 555 aa13.15□□□□□ -0.3
PUM1-202ENST00000373741 COL5A3P25940 1745 aaPredicted RBP13.15□□□□□ -0.3
PUM1-202ENST00000373741 SEPT2Q15019 361 aa13.15□□□□□ -0.3
PUM1-202ENST00000373741 OSBPL5Q9H0X9 879 aaPredicted RBP13.15□□□□□ -0.3
PUM1-202ENST00000373741 ANAPC4Q9UJX5 808 aa13.15□□□□□ -0.3
PUM1-202ENST00000373741 GNAQP50148 359 aa13.15□□□□□ -0.3
PUM1-202ENST00000373741 RASSF7Q02833 373 aa13.15□□□□□ -0.3
PUM1-202ENST00000373741 KLHL10Q6JEL2 608 aa13.15□□□□□ -0.3
PUM1-202ENST00000373741 LINC00301Q8NCQ3 95 aa13.15□□□□□ -0.3
PUM1-202ENST00000373741 DHX58Q96C10 678 aa13.15□□□□□ -0.3
PUM1-202ENST00000373741 RNF26Q9BY78 433 aaPredicted RBP13.15□□□□□ -0.3
PUM1-202ENST00000373741 BIN2Q9UBW5 565 aaPredicted RBP13.15□□□□□ -0.3
PUM1-202ENST00000373741 WDR19Q8NEZ3 1342 aa13.15□□□□□ -0.31
PUM1-202ENST00000373741 DDAH1O94760 285 aa13.15□□□□□ -0.31
PUM1-202ENST00000373741 GH2P01242 217 aa13.15□□□□□ -0.31
PUM1-202ENST00000373741 ICA1Q05084 483 aa13.15□□□□□ -0.31
PUM1-202ENST00000373741 SYCP1Q15431 976 aa13.15□□□□□ -0.31
PUM1-202ENST00000373741 SBK1Q52WX2 424 aa13.15□□□□□ -0.31
PUM1-202ENST00000373741 CC2D2BQ6DHV5 1058 aa13.15□□□□□ -0.31
PUM1-202ENST00000373741 APOBEC3HQ6NTF7 200 aaKnown RBP13.15□□□□□ -0.31
PUM1-202ENST00000373741 CACTINQ8WUQ7 758 aaKnown RBP13.15□□□□□ -0.31
PUM1-202ENST00000373741 CTDP1Q9Y5B0 961 aaPredicted RBP13.15□□□□□ -0.31
PUM1-202ENST00000373741 TNRC6CQ9HCJ0 1690 aaKnown RBP13.14□□□□□ -0.31
PUM1-202ENST00000373741 TUBGCP6Q96RT7 1819 aa13.14□□□□□ -0.31
PUM1-202ENST00000373741 PCP11498 1178 aaKnown RBP13.14□□□□□ -0.31
PUM1-202ENST00000373741 INF2Q27J81 1249 aa13.14□□□□□ -0.31
PUM1-202ENST00000373741 FEZ2Q9UHY8 353 aaPredicted RBP13.14□□□□□ -0.31
PUM1-202ENST00000373741 DNAI1Q9UI46 699 aa13.14□□□□□ -0.31
PUM1-202ENST00000373741 NEMFO60524 1076 aa13.14□□□□□ -0.31
PUM1-202ENST00000373741 DACT2Q5SW24 774 aa13.14□□□□□ -0.31
PUM1-202ENST00000373741 GOLPH3LQ9H4A5 285 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms