RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 CCDC96Q2M329 555 aa18.04■□□□□ 0.48
CTSA-202ENST00000354880 SLC35G1Q2M3R5 365 aa18.04■□□□□ 0.48
CTSA-202ENST00000354880 PIBF1Q8WXW3 757 aa18.04■□□□□ 0.48
CTSA-202ENST00000354880 CPVLQ9H3G5 476 aa18.04■□□□□ 0.48
CTSA-202ENST00000354880 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.04■□□□□ 0.48
CTSA-202ENST00000354880 ZNF112Q9UJU3 913 aa18.04■□□□□ 0.48
CTSA-202ENST00000354880 TMX2Q9Y320 296 aa18.04■□□□□ 0.48
CTSA-202ENST00000354880 SCG2P13521 617 aa18.03■□□□□ 0.48
CTSA-202ENST00000354880 ECE1P42892 770 aa18.03■□□□□ 0.48
CTSA-202ENST00000354880 KRT26Q7Z3Y9 468 aa18.03■□□□□ 0.48
CTSA-202ENST00000354880 PNMA8AQ86V59 439 aaPredicted RBP18.03■□□□□ 0.48
CTSA-202ENST00000354880 ACER1Q8TDN7 264 aa18.03■□□□□ 0.48
CTSA-202ENST00000354880 UBA5Q9GZZ9 404 aa18.03■□□□□ 0.48
CTSA-202ENST00000354880 GPCPD1Q9NPB8 672 aa18.03■□□□□ 0.48
CTSA-202ENST00000354880 ADM5C9JUS6 153 aa18.02■□□□□ 0.48
CTSA-202ENST00000354880 NDUFB10O96000 172 aa18.02■□□□□ 0.48
CTSA-202ENST00000354880 INPP5BP32019 993 aa18.02■□□□□ 0.48
CTSA-202ENST00000354880 EAPPQ56P03 285 aaPredicted RBP18.02■□□□□ 0.48
CTSA-202ENST00000354880 KCTD1Q719H9 257 aa18.02■□□□□ 0.48
CTSA-202ENST00000354880 USP48Q86UV5 1035 aa18.02■□□□□ 0.48
CTSA-202ENST00000354880 GMCL1Q96IK5 515 aa18.02■□□□□ 0.48
CTSA-202ENST00000354880 WRNIP1Q96S55 665 aa18.02■□□□□ 0.48
CTSA-202ENST00000354880 RIOX1Q9H6W3 641 aa18.02■□□□□ 0.48
CTSA-202ENST00000354880 SH2D4AQ9H788 454 aa18.02■□□□□ 0.48
CTSA-202ENST00000354880 SSC5DA1L4H1 1573 aa18.02■□□□□ 0.48
CTSA-202ENST00000354880 MMP1P03956 469 aa18.02■□□□□ 0.47
CTSA-202ENST00000354880 KIF23Q02241 960 aaPredicted RBP18.02■□□□□ 0.47
CTSA-202ENST00000354880 DNM1Q05193 864 aaKnown RBP18.02■□□□□ 0.47
CTSA-202ENST00000354880 FAM173BQ6P4H8 233 aa18.02■□□□□ 0.47
CTSA-202ENST00000354880 KLRG1Q96E93 195 aa18.02■□□□□ 0.47
CTSA-202ENST00000354880 GOPCQ9HD26 462 aa18.02■□□□□ 0.47
CTSA-202ENST00000354880 VPS54Q9P1Q0 977 aa18.02■□□□□ 0.47
CTSA-202ENST00000354880 DCAF8L1A6NGE4 600 aa18.01■□□□□ 0.47
CTSA-202ENST00000354880 SAFBQ15424 915 aaKnown RBP eCLIP18.01■□□□□ 0.47
CTSA-202ENST00000354880 SCYL3Q8IZE3 742 aa18.01■□□□□ 0.47
CTSA-202ENST00000354880 RRP36Q96EU6 259 aaKnown RBP18.01■□□□□ 0.47
CTSA-202ENST00000354880 ISY1Q9ULR0 285 aaKnown RBP18.01■□□□□ 0.47
CTSA-202ENST00000354880 KCNJ14Q9UNX9 436 aa18.01■□□□□ 0.47
CTSA-202ENST00000354880 FZD1Q9UP38 647 aa18.01■□□□□ 0.47
CTSA-202ENST00000354880 DOCK1Q14185 1865 aa18.01■□□□□ 0.47
CTSA-202ENST00000354880 TTBK2Q6IQ55 1244 aa18■□□□□ 0.47
CTSA-202ENST00000354880 DLK2Q6UY11 383 aa18■□□□□ 0.47
CTSA-202ENST00000354880 BRAPQ7Z569 592 aa18■□□□□ 0.47
CTSA-202ENST00000354880 CCDC84Q86UT8 332 aaPredicted RBP18■□□□□ 0.47
CTSA-202ENST00000354880 SHISA4Q96DD7 197 aa18■□□□□ 0.47
CTSA-202ENST00000354880 VAT1LQ9HCJ6 419 aa18■□□□□ 0.47
CTSA-202ENST00000354880 BMP3P12645 472 aa18■□□□□ 0.47
CTSA-202ENST00000354880 VEGFAP15692 232 aaPredicted RBP18■□□□□ 0.47
CTSA-202ENST00000354880 NCLP19338 710 aaKnown RBP18■□□□□ 0.47
CTSA-202ENST00000354880 KRT85P78386 507 aa18■□□□□ 0.47
CTSA-202ENST00000354880 GNL2Q13823 731 aaKnown RBP18■□□□□ 0.47
CTSA-202ENST00000354880 HOMER1Q86YM7 354 aa18■□□□□ 0.47
CTSA-202ENST00000354880 ZKSCAN4Q969J2 545 aaPredicted RBP18■□□□□ 0.47
CTSA-202ENST00000354880 PHF20Q9BVI0 1012 aa18■□□□□ 0.47
CTSA-202ENST00000354880 VCPKMTQ9H867 229 aa18■□□□□ 0.47
CTSA-202ENST00000354880 SEC63Q9UGP8 760 aaKnown RBP18■□□□□ 0.47
CTSA-202ENST00000354880 CNPY2Q9Y2B0 182 aa18■□□□□ 0.47
CTSA-202ENST00000354880 KIF28PB7ZC32 967 aa17.99■□□□□ 0.47
CTSA-202ENST00000354880 PTMSP20962 102 aa17.99■□□□□ 0.47
CTSA-202ENST00000354880 DIS3L2Q8IYB7 885 aaKnown RBP17.99■□□□□ 0.47
CTSA-202ENST00000354880 ADGRF4Q8IZF3 695 aa17.99■□□□□ 0.47
CTSA-202ENST00000354880 SPICE1Q8N0Z3 855 aa17.99■□□□□ 0.47
CTSA-202ENST00000354880 PIGSQ96S52 555 aa17.99■□□□□ 0.47
CTSA-202ENST00000354880 GLIS2Q9BZE0 524 aaPredicted RBP17.99■□□□□ 0.47
CTSA-202ENST00000354880 SH3GLB2Q9NR46 395 aa17.99■□□□□ 0.47
CTSA-202ENST00000354880 MYH15Q9Y2K3 1946 aa17.99■□□□□ 0.47
CTSA-202ENST00000354880 PPP1R12BO60237 982 aaPredicted RBP17.98■□□□□ 0.47
CTSA-202ENST00000354880 USP2O75604 605 aaPredicted RBP17.98■□□□□ 0.47
CTSA-202ENST00000354880 U2AF2P26368 475 aaKnown RBP eCLIP17.98■□□□□ 0.47
CTSA-202ENST00000354880 SLC16A2P36021 539 aa17.98■□□□□ 0.47
CTSA-202ENST00000354880 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.98■□□□□ 0.472e-13■■□□□ 14
CTSA-202ENST00000354880 GPKOWQ92917 476 aaPredicted RBP eCLIP17.98■□□□□ 0.47
CTSA-202ENST00000354880 NUP88Q99567 741 aaPredicted RBP17.98■□□□□ 0.47
CTSA-202ENST00000354880 FEZ1Q99689 392 aa17.98■□□□□ 0.47
CTSA-202ENST00000354880 FOXP1Q9H334 677 aaPredicted RBP17.98■□□□□ 0.47
CTSA-202ENST00000354880 JMJD4Q9H9V9 463 aa17.98■□□□□ 0.47
CTSA-202ENST00000354880 PICK1Q9NRD5 415 aa17.98■□□□□ 0.47
CTSA-202ENST00000354880 BTBD18B2RXH4 712 aa17.98■□□□□ 0.47
CTSA-202ENST00000354880 PRKG1Q13976 671 aa17.98■□□□□ 0.47
CTSA-202ENST00000354880 ZYXQ15942 572 aaKnown RBP17.98■□□□□ 0.47
CTSA-202ENST00000354880 KIAA1755Q5JYT7 1200 aa17.98■□□□□ 0.47
CTSA-202ENST00000354880 WWC2Q6AWC2 1192 aa17.98■□□□□ 0.47
CTSA-202ENST00000354880 HEATR3Q7Z4Q2 680 aa17.98■□□□□ 0.47
CTSA-202ENST00000354880 GDPD2Q9HCC8 539 aa17.98■□□□□ 0.47
CTSA-202ENST00000354880 BARHL2Q9NY43 387 aa17.98■□□□□ 0.47
CTSA-202ENST00000354880 TMEM232C9JQI7 657 aa17.97■□□□□ 0.47
CTSA-202ENST00000354880 FIBPO43427 364 aa17.97■□□□□ 0.47
CTSA-202ENST00000354880 PRPF40AO75400 957 aaKnown RBP17.97■□□□□ 0.47
CTSA-202ENST00000354880 PTPRAP18433 802 aa17.97■□□□□ 0.47
CTSA-202ENST00000354880 NF2P35240 595 aa17.97■□□□□ 0.47
CTSA-202ENST00000354880 NOL9Q5SY16 702 aaKnown RBP17.97■□□□□ 0.47
CTSA-202ENST00000354880 ATL3Q6DD88 541 aa17.97■□□□□ 0.47
CTSA-202ENST00000354880 FAM177A1Q8N128 213 aaPredicted RBP17.97■□□□□ 0.47
CTSA-202ENST00000354880 CDCA5Q96FF9 252 aa17.97■□□□□ 0.47
CTSA-202ENST00000354880 BRMS1Q9HCU9 246 aa17.97■□□□□ 0.47
CTSA-202ENST00000354880 LMBRD1Q9NUN5 540 aa17.97■□□□□ 0.47
CTSA-202ENST00000354880 KRT2P35908 639 aa17.96■□□□□ 0.47
CTSA-202ENST00000354880 NLRP5P59047 1200 aa17.96■□□□□ 0.47
CTSA-202ENST00000354880 IKQ13123 557 aaPredicted RBP17.96■□□□□ 0.47
CTSA-202ENST00000354880 CSPP1Q1MSJ5 1256 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms