RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 RNF180Q86T96 592 aa19.94■□□□□ 0.78
NECTIN1-202ENST00000340882 SPICE1Q8N0Z3 855 aa19.94■□□□□ 0.78
NECTIN1-202ENST00000340882 ATXN2LQ8WWM7 1075 aaKnown RBP19.94■□□□□ 0.78
NECTIN1-202ENST00000340882 RIOK1Q9BRS2 568 aaKnown RBP19.94■□□□□ 0.78
NECTIN1-202ENST00000340882 IGSF3O75054 1194 aa19.93■□□□□ 0.78
NECTIN1-202ENST00000340882 FLOT1O75955 427 aa19.93■□□□□ 0.78
NECTIN1-202ENST00000340882 FCER1AP12319 257 aa19.93■□□□□ 0.78
NECTIN1-202ENST00000340882 TRIM27P14373 513 aa19.93■□□□□ 0.78
NECTIN1-202ENST00000340882 PLA2G5P39877 138 aa19.93■□□□□ 0.78
NECTIN1-202ENST00000340882 IRX5P78411 483 aaPredicted RBP19.93■□□□□ 0.78
NECTIN1-202ENST00000340882 CCDC85BQ15834 202 aaPredicted RBP19.93■□□□□ 0.78
NECTIN1-202ENST00000340882 MB21D1Q8N884 522 aa19.93■□□□□ 0.78
NECTIN1-202ENST00000340882 SLC44A5Q8NCS7 719 aa19.93■□□□□ 0.78
NECTIN1-202ENST00000340882 TINF2Q9BSI4 451 aa19.93■□□□□ 0.78
NECTIN1-202ENST00000340882 TBX21Q9UL17 535 aa19.93■□□□□ 0.78
NECTIN1-202ENST00000340882 BAZ2AQ9UIF9 1905 aaKnown RBP19.92■□□□□ 0.78
NECTIN1-202ENST00000340882 MCM3APO60318 1980 aa19.92■□□□□ 0.78
NECTIN1-202ENST00000340882 XIRP2A4UGR9 3374 aa19.92■□□□□ 0.78
NECTIN1-202ENST00000340882 TIMP1P01033 207 aa19.92■□□□□ 0.78
NECTIN1-202ENST00000340882 POLR3DP05423 398 aaPredicted RBP19.92■□□□□ 0.78
NECTIN1-202ENST00000340882 CYP2D6P10635 497 aa19.92■□□□□ 0.78
NECTIN1-202ENST00000340882 ZNF792Q3KQV3 632 aa19.92■□□□□ 0.78
NECTIN1-202ENST00000340882 TMEM240Q5SV17 173 aa19.92■□□□□ 0.78
NECTIN1-202ENST00000340882 RASIP1Q5U651 963 aa19.92■□□□□ 0.78
NECTIN1-202ENST00000340882 EAF2Q96CJ1 260 aaPredicted RBP19.92■□□□□ 0.78
NECTIN1-202ENST00000340882 TOX2Q96NM4 488 aa19.92■□□□□ 0.78
NECTIN1-202ENST00000340882 GAS2L1Q99501 681 aaPredicted RBP19.92■□□□□ 0.78
NECTIN1-202ENST00000340882 THEGQ9P2T0 379 aa19.92■□□□□ 0.78
NECTIN1-202ENST00000340882 NRBP1Q9UHY1 535 aa19.92■□□□□ 0.78
NECTIN1-202ENST00000340882 MYADML2A6NDP7 307 aa19.91■□□□□ 0.78
NECTIN1-202ENST00000340882 BCAR3O75815 825 aa19.91■□□□□ 0.78
NECTIN1-202ENST00000340882 ACLYP53396 1101 aa19.91■□□□□ 0.78
NECTIN1-202ENST00000340882 OS9Q13438 667 aaPredicted RBP19.91■□□□□ 0.78
NECTIN1-202ENST00000340882 AKNAD1Q5T1N1 836 aa19.91■□□□□ 0.78
NECTIN1-202ENST00000340882 SSH3Q8TE77 659 aa19.91■□□□□ 0.78
NECTIN1-202ENST00000340882 MMP19Q99542 508 aa19.91■□□□□ 0.78
NECTIN1-202ENST00000340882 ROBO3Q96MS0 1386 aa19.91■□□□□ 0.78
NECTIN1-202ENST00000340882 DCDC2CA8MYV0 355 aa19.9■□□□□ 0.78
NECTIN1-202ENST00000340882 SMIM22K7EJ46 135 aa19.9■□□□□ 0.78
NECTIN1-202ENST00000340882 SURF6O75683 361 aaKnown RBP19.9■□□□□ 0.78
NECTIN1-202ENST00000340882 ACRP10323 421 aa19.9■□□□□ 0.78
NECTIN1-202ENST00000340882 CCSAPQ6IQ19 270 aaPredicted RBP19.9■□□□□ 0.78
NECTIN1-202ENST00000340882 MFSD5Q6N075 450 aa19.9■□□□□ 0.78
NECTIN1-202ENST00000340882 CCDC129Q6ZRS4 1044 aa19.9■□□□□ 0.78
NECTIN1-202ENST00000340882 CERS3Q8IU89 383 aa19.9■□□□□ 0.78
NECTIN1-202ENST00000340882 KLHDC9Q8NEP7 349 aa19.9■□□□□ 0.78
NECTIN1-202ENST00000340882 CLUAP1Q96AJ1 413 aa19.9■□□□□ 0.78
NECTIN1-202ENST00000340882 NECAB3Q96P71 396 aaPredicted RBP19.9■□□□□ 0.78
NECTIN1-202ENST00000340882 UHRF1Q96T88 793 aaPredicted RBP19.9■□□□□ 0.78
NECTIN1-202ENST00000340882 STARD7Q9NQZ5 370 aa19.9■□□□□ 0.78
NECTIN1-202ENST00000340882 FBXO28Q9NVF7 368 aa19.9■□□□□ 0.78
NECTIN1-202ENST00000340882 SYNRGQ9UMZ2 1314 aa19.9■□□□□ 0.78
NECTIN1-202ENST00000340882 AKR1A1P14550 325 aa19.89■□□□□ 0.77
NECTIN1-202ENST00000340882 CSF2RAP15509 400 aa19.89■□□□□ 0.77
NECTIN1-202ENST00000340882 MAP3K12Q12852 859 aa19.89■□□□□ 0.77
NECTIN1-202ENST00000340882 KCNA10Q16322 511 aa19.89■□□□□ 0.77
NECTIN1-202ENST00000340882 DYNLL2Q96FJ2 89 aa19.89■□□□□ 0.77
NECTIN1-202ENST00000340882 TSEN34Q9BSV6 310 aaKnown RBP19.89■□□□□ 0.77
NECTIN1-202ENST00000340882 MCM9Q9NXL9 1143 aa19.89■□□□□ 0.77
NECTIN1-202ENST00000340882 ADAMTS5Q9UNA0 930 aa19.89■□□□□ 0.77
NECTIN1-202ENST00000340882 AKR1B1P15121 316 aa19.88■□□□□ 0.77
NECTIN1-202ENST00000340882 MRPS5P82675 430 aaKnown RBP19.88■□□□□ 0.77
NECTIN1-202ENST00000340882 ATP8B2P98198 1209 aa19.88■□□□□ 0.77
NECTIN1-202ENST00000340882 TMEM179Q6ZVK1 233 aa19.88■□□□□ 0.77
NECTIN1-202ENST00000340882 ZNF365Q70YC5 407 aa19.88■□□□□ 0.77
NECTIN1-202ENST00000340882 SDR42E1Q8WUS8 393 aa19.88■□□□□ 0.77
NECTIN1-202ENST00000340882 FAM122AQ96E09 287 aa19.88■□□□□ 0.77
NECTIN1-202ENST00000340882 C1orf115Q9H7X2 142 aa19.88■□□□□ 0.77
NECTIN1-202ENST00000340882 VCPKMTQ9H867 229 aa19.88■□□□□ 0.77
NECTIN1-202ENST00000340882 TMX2Q9Y320 296 aa19.88■□□□□ 0.77
NECTIN1-202ENST00000340882 MAGEB6P1A0A0J9YX57 407 aa19.87■□□□□ 0.77
NECTIN1-202ENST00000340882 ADCY6O43306 1168 aa19.87■□□□□ 0.77
NECTIN1-202ENST00000340882 SLC25A27O95847 323 aa19.87■□□□□ 0.77
NECTIN1-202ENST00000340882 CDK7P50613 346 aa19.87■□□□□ 0.77
NECTIN1-202ENST00000340882 RIOX2Q8IUF8 465 aa19.87■□□□□ 0.77
NECTIN1-202ENST00000340882 DIS3Q9Y2L1 958 aaKnown RBP19.87■□□□□ 0.77
NECTIN1-202ENST00000340882 SNAI1O95863 264 aaPredicted RBP19.86■□□□□ 0.77
NECTIN1-202ENST00000340882 IGFBP4P22692 258 aa19.86■□□□□ 0.77
NECTIN1-202ENST00000340882 PPIGQ13427 754 aaKnown RBP eCLIP19.86■□□□□ 0.77
NECTIN1-202ENST00000340882 TMEM57Q8N5G2 664 aa19.86■□□□□ 0.77
NECTIN1-202ENST00000340882 REPS2Q8NFH8 660 aa19.86■□□□□ 0.77
NECTIN1-202ENST00000340882 NUP133Q8WUM0 1156 aa19.86■□□□□ 0.77
NECTIN1-202ENST00000340882 PPP1R12CQ9BZL4 782 aa19.86■□□□□ 0.77
NECTIN1-202ENST00000340882 NKX2-4Q9H2Z4 354 aa19.86■□□□□ 0.77
NECTIN1-202ENST00000340882 DCP1AQ9NPI6 582 aaPredicted RBP19.86■□□□□ 0.77
NECTIN1-202ENST00000340882 CXXC1Q9P0U4 656 aaPredicted RBP19.86■□□□□ 0.77
NECTIN1-202ENST00000340882 ZNF214Q9UL59 606 aaPredicted RBP19.86■□□□□ 0.77
NECTIN1-202ENST00000340882 NOP58Q9Y2X3 529 aaKnown RBP19.86■□□□□ 0.77
NECTIN1-202ENST00000340882 WDR46O15213 610 aaKnown RBP19.85■□□□□ 0.77
NECTIN1-202ENST00000340882 ICA1Q05084 483 aa19.85■□□□□ 0.77
NECTIN1-202ENST00000340882 KCTD2Q14681 263 aa19.85■□□□□ 0.77
NECTIN1-202ENST00000340882 FRAT1Q92837 279 aaPredicted RBP19.85■□□□□ 0.77
NECTIN1-202ENST00000340882 YBX2Q9Y2T7 364 aaKnown RBP19.85■□□□□ 0.77
NECTIN1-202ENST00000340882 MOXD2PA6NHM9 499 aa19.84■□□□□ 0.77
NECTIN1-202ENST00000340882 VWA5AO00534 786 aa19.84■□□□□ 0.77
NECTIN1-202ENST00000340882 STAT3P40763 770 aa19.84■□□□□ 0.77
NECTIN1-202ENST00000340882 LCORLQ8N3X6 602 aa19.84■□□□□ 0.77
NECTIN1-202ENST00000340882 CRNKL1Q9BZJ0 848 aaKnown RBP19.84■□□□□ 0.77
NECTIN1-202ENST00000340882 ARHGEF10LQ9HCE6 1279 aa19.84■□□□□ 0.77
NECTIN1-202ENST00000340882 CNPY2Q9Y2B0 182 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms