RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 PPP6R2O75170 966 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 GCFC2P16383 781 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 CHRNA5P30532 468 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 SLFN13Q68D06 897 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 BLIDQ8IZY5 108 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 REXO1Q8N1G1 1221 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 FLT1P17948 1338 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 DTHD1Q6ZMT9 781 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 SYCE3A1L190 88 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 NOP56O00567 594 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 AOC3Q16853 763 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 TTC38Q5R3I4 469 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 SMIM5Q71RC9 77 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 IGDCC4Q8TDY8 1250 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 RTFDC1Q9BY42 306 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 NYAP2Q9P242 653 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 NEDD4P46934 1319 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 PSDA5PKW4 1024 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 SPZ1Q9BXG8 430 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 MAGEF1Q9HAY2 307 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 SPAG1Q07617 926 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 FAM200AQ8TCP9 573 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 ANKS1AQ92625 1134 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 C4BP0C0L5 1744 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 TOGARAM1Q9Y4F4 1720 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 CCP110O43303 1012 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 PPM1FP49593 454 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 ZSCAN23Q3MJ62 389 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 ENAHQ8N8S7 591 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 MRPL11Q9Y3B7 192 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 ELMSAN1Q6PJG2 1045 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 AMNQ9BXJ7 453 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 IDI2Q9BXS1 227 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 DACT1Q9NYF0 836 aa9.68□□□□□ -0.86
PDLIM5-201ENST00000317968 CMA1P23946 247 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 KIF23Q02241 960 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 SLC39A14Q15043 492 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 CCDC117Q8IWD4 279 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 ZBTB24O43167 697 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 MMP1P03956 469 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 RXRAP19793 462 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 SEMA3FQ13275 785 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 KRT79Q5XKE5 535 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 CCDC174Q6PII3 467 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 TIGD1Q96MW7 591 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 TMEM106CQ9BVX2 250 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 TRIM5Q9C035 493 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 IL25Q9H293 177 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 CLSTN2Q9H4D0 955 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 VIRMAQ69YN4 1812 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 RAD17O75943 681 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 TCP10Q12799 353 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 RESTQ13127 1097 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 SLC4A8Q2Y0W8 1093 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 FAM83AQ86UY5 434 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 PHKBQ93100 1093 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 KCNG1Q9UIX4 513 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 CYB5R4Q7L1T6 521 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 MCF2L2Q86YR7 1114 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 PROM2Q8N271 834 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 RNF216Q9NWF9 866 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 NUP188Q5SRE5 1749 aa9.67□□□□□ -0.86
PDLIM5-201ENST00000317968 SYCP3Q8IZU3 236 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 AZI2Q9H6S1 392 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 GDPD2Q9HCC8 539 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 NEMFO60524 1076 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 LIG1P18858 919 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 ECE1P42892 770 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 TMEM47Q9BQJ4 181 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 PPP2R3BQ9Y5P8 575 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 DPF2Q92785 391 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 AK8Q96MA6 479 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 MYL10Q9BUA6 226 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 CUEDC2Q9H467 287 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 TJP1Q07157 1748 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 DDIT3P35638 169 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 ARL6IP4Q66PJ3 421 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 NLRX1Q86UT6 975 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 PCDHA4Q9UN74 947 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 BTAF1O14981 1849 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 BACH1O14867 736 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 NR1I2O75469 434 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 BMP3P12645 472 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 PFKFB3Q16875 520 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 HAUS3Q68CZ6 603 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 GPR101Q96P66 508 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 GPCPD1Q9NPB8 672 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 BRPF3Q9ULD4 1205 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 NUP98P52948 1817 aa9.66□□□□□ -0.86
PDLIM5-201ENST00000317968 LARGE1O95461 756 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 DNM2P50570 870 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 CDR1P51861 262 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 ANTXR2P58335 489 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 CDC42EP5Q6NZY7 148 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 CDAN1Q8IWY9 1227 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 LRRC45Q96CN5 670 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 ZNF341Q9BYN7 854 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 AK9Q5TCS8 1911 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms