RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 PPP2R3AQ06190 1150 aa17.13■□□□□ 0.33
CSDC2-201ENST00000306149 CT47A1Q5JQC4 288 aaPredicted RBP17.13■□□□□ 0.33
CSDC2-201ENST00000306149 IQUBQ8NA54 791 aa17.13■□□□□ 0.33
CSDC2-201ENST00000306149 PLIN2Q99541 437 aa17.13■□□□□ 0.33
CSDC2-201ENST00000306149 MRFAP1Q9Y605 127 aa17.13■□□□□ 0.33
CSDC2-201ENST00000306149 ADGRG1Q9Y653 693 aa17.13■□□□□ 0.33
CSDC2-201ENST00000306149 FAM205AQ6ZU69 1335 aa17.13■□□□□ 0.33
CSDC2-201ENST00000306149 ATP8B1O43520 1251 aa17.12■□□□□ 0.33
CSDC2-201ENST00000306149 ORC4O43929 436 aa17.12■□□□□ 0.33
CSDC2-201ENST00000306149 BMP15O95972 392 aa17.12■□□□□ 0.33
CSDC2-201ENST00000306149 ABL1P00519 1130 aa17.12■□□□□ 0.33
CSDC2-201ENST00000306149 CCDC175P0C221 793 aa17.12■□□□□ 0.33
CSDC2-201ENST00000306149 PBX1P40424 430 aa17.12■□□□□ 0.33
CSDC2-201ENST00000306149 PFKFB3Q16875 520 aaPredicted RBP17.12■□□□□ 0.33
CSDC2-201ENST00000306149 GDAQ9Y2T3 454 aa17.12■□□□□ 0.33
CSDC2-201ENST00000306149 A0A1B0GUL6 1792 aa17.12■□□□□ 0.33
CSDC2-201ENST00000306149 GYPCP04921 128 aa17.12■□□□□ 0.33
CSDC2-201ENST00000306149 PLA2G4AP47712 749 aa17.12■□□□□ 0.33
CSDC2-201ENST00000306149 TFAP4Q01664 338 aa17.12■□□□□ 0.33
CSDC2-201ENST00000306149 KRT31Q15323 416 aa17.12■□□□□ 0.33
CSDC2-201ENST00000306149 PDXDC2PQ6P474 469 aa17.12■□□□□ 0.33
CSDC2-201ENST00000306149 PANX2Q96RD6 677 aa17.12■□□□□ 0.33
CSDC2-201ENST00000306149 PP2D1A8MPX8 630 aa17.11■□□□□ 0.33
CSDC2-201ENST00000306149 N4BP3O15049 544 aa17.11■□□□□ 0.33
CSDC2-201ENST00000306149 TYW1BQ6NUM6 668 aa17.11■□□□□ 0.33
CSDC2-201ENST00000306149 ZBTB9Q96C00 473 aa17.11■□□□□ 0.33
CSDC2-201ENST00000306149 TAB2Q9NYJ8 693 aa17.11■□□□□ 0.33
CSDC2-201ENST00000306149 TFRCP02786 760 aaKnown RBP17.11■□□□□ 0.33
CSDC2-201ENST00000306149 FILIP1LQ4L180 1135 aa17.11■□□□□ 0.33
CSDC2-201ENST00000306149 NBPF5PQ86XG9 351 aaPredicted RBP17.11■□□□□ 0.33
CSDC2-201ENST00000306149 NLRP3Q96P20 1036 aa17.11■□□□□ 0.33
CSDC2-201ENST00000306149 IL17RBQ9NRM6 502 aa17.11■□□□□ 0.33
CSDC2-201ENST00000306149 USP17L3A6NCW0 530 aa17.11■□□□□ 0.33
CSDC2-201ENST00000306149 USP17L4A6NCW7 530 aa17.11■□□□□ 0.33
CSDC2-201ENST00000306149 MFAP3LO75121 409 aa17.11■□□□□ 0.33
CSDC2-201ENST00000306149 USP17L1Q7RTZ2 530 aa17.11■□□□□ 0.33
CSDC2-201ENST00000306149 GPR161Q8N6U8 529 aaKnown RBP17.11■□□□□ 0.33
CSDC2-201ENST00000306149 ACRBPQ8NEB7 543 aa17.11■□□□□ 0.33
CSDC2-201ENST00000306149 KAT14Q9H8E8 782 aa17.11■□□□□ 0.33
CSDC2-201ENST00000306149 CCDC66A2RUB6 948 aa17.1■□□□□ 0.33
CSDC2-201ENST00000306149 PCP11498 1178 aaKnown RBP17.1■□□□□ 0.33
CSDC2-201ENST00000306149 FAM98CQ17RN3 349 aaKnown RBP17.1■□□□□ 0.33
CSDC2-201ENST00000306149 RSRC2Q7L4I2 434 aaKnown RBP17.1■□□□□ 0.33
CSDC2-201ENST00000306149 RASGRP2Q7LDG7 609 aa17.1■□□□□ 0.33
CSDC2-201ENST00000306149 DZIP1Q86YF9 867 aaKnown RBP17.1■□□□□ 0.33
CSDC2-201ENST00000306149 SMARCC1Q92922 1105 aaPredicted RBP17.1■□□□□ 0.33
CSDC2-201ENST00000306149 ATP8A2Q9NTI2 1148 aa17.1■□□□□ 0.33
CSDC2-201ENST00000306149 THRAP3Q9Y2W1 955 aaKnown RBP17.1■□□□□ 0.33
CSDC2-201ENST00000306149 MYH8P13535 1937 aa17.1■□□□□ 0.33
CSDC2-201ENST00000306149 SLC44A5Q8NCS7 719 aa17.1■□□□□ 0.33
CSDC2-201ENST00000306149 NELFBQ8WX92 580 aa17.1■□□□□ 0.33
CSDC2-201ENST00000306149 CTAGE1Q96RT6 745 aa17.1■□□□□ 0.33
CSDC2-201ENST00000306149 SETDB2Q96T68 719 aa17.1■□□□□ 0.33
CSDC2-201ENST00000306149 CPVLQ9H3G5 476 aa17.1■□□□□ 0.33
CSDC2-201ENST00000306149 PUF60Q9UHX1 559 aaKnown RBP17.1■□□□□ 0.33
CSDC2-201ENST00000306149 WNK3Q9BYP7 1800 aa17.1■□□□□ 0.33
CSDC2-201ENST00000306149 SPATA31A5Q5VU36 1347 aa17.09■□□□□ 0.33
CSDC2-201ENST00000306149 SPATA31A7Q8IWB4 1347 aa17.09■□□□□ 0.33
CSDC2-201ENST00000306149 TRIM49BA6NDI0 452 aa17.09■□□□□ 0.33
CSDC2-201ENST00000306149 DIXDC1Q155Q3 683 aa17.09■□□□□ 0.33
CSDC2-201ENST00000306149 BLIDQ8IZY5 108 aa17.09■□□□□ 0.33
CSDC2-201ENST00000306149 PNMA1Q8ND90 353 aa17.09■□□□□ 0.33
CSDC2-201ENST00000306149 EEF2KMTQ96G04 330 aa17.09■□□□□ 0.33
CSDC2-201ENST00000306149 GPR101Q96P66 508 aaPredicted RBP17.09■□□□□ 0.33
CSDC2-201ENST00000306149 ARPP21Q9UBL0 812 aaPredicted RBP17.09■□□□□ 0.33
CSDC2-201ENST00000306149 ROBO1Q9Y6N7 1651 aa17.09■□□□□ 0.33
CSDC2-201ENST00000306149 PRCPP42785 496 aa17.09■□□□□ 0.33
CSDC2-201ENST00000306149 GRIK5Q16478 980 aa17.09■□□□□ 0.33
CSDC2-201ENST00000306149 ZNF569Q5MCW4 686 aa17.09■□□□□ 0.33
CSDC2-201ENST00000306149 RASSF8Q8NHQ8 419 aa17.09■□□□□ 0.33
CSDC2-201ENST00000306149 GTPBP6O43824 516 aaPredicted RBP17.08■□□□□ 0.33
CSDC2-201ENST00000306149 RPN1P04843 607 aaKnown RBP17.08■□□□□ 0.33
CSDC2-201ENST00000306149 GOLGA8HP0CJ92 632 aa17.08■□□□□ 0.33
CSDC2-201ENST00000306149 USP5P45974 858 aa17.08■□□□□ 0.33
CSDC2-201ENST00000306149 PAK1Q13153 545 aa17.08■□□□□ 0.33
CSDC2-201ENST00000306149 SLC35G1Q2M3R5 365 aa17.08■□□□□ 0.33
CSDC2-201ENST00000306149 AMIGO3Q86WK7 504 aa17.08■□□□□ 0.33
CSDC2-201ENST00000306149 C4orf32Q8N8J7 132 aa17.08■□□□□ 0.33
CSDC2-201ENST00000306149 NAA15Q9BXJ9 866 aaKnown RBP17.08■□□□□ 0.33
CSDC2-201ENST00000306149 UBXN6Q9BZV1 441 aa17.08■□□□□ 0.33
CSDC2-201ENST00000306149 TMEM60Q9H2L4 133 aa17.08■□□□□ 0.33
CSDC2-201ENST00000306149 SEMA3EO15041 775 aa17.08■□□□□ 0.32
CSDC2-201ENST00000306149 SASH3O75995 380 aa17.08■□□□□ 0.32
CSDC2-201ENST00000306149 STAT6P42226 847 aa17.08■□□□□ 0.32
CSDC2-201ENST00000306149 ERVK-24P63145 666 aa17.08■□□□□ 0.32
CSDC2-201ENST00000306149 SLC10A5Q5PT55 438 aa17.08■□□□□ 0.32
CSDC2-201ENST00000306149 SH3RF3Q8TEJ3 882 aaPredicted RBP17.08■□□□□ 0.32
CSDC2-201ENST00000306149 NUP88Q99567 741 aaPredicted RBP17.08■□□□□ 0.32
CSDC2-201ENST00000306149 PARD6BQ9BYG5 372 aa17.08■□□□□ 0.32
CSDC2-201ENST00000306149 POLR3GO15318 223 aaPredicted RBP17.07■□□□□ 0.32
CSDC2-201ENST00000306149 KIF5BP33176 963 aa17.07■□□□□ 0.32
CSDC2-201ENST00000306149 COPB1P53618 953 aaKnown RBP17.07■□□□□ 0.32
CSDC2-201ENST00000306149 INF2Q27J81 1249 aa17.07■□□□□ 0.32
CSDC2-201ENST00000306149 CC2D1AQ6P1N0 951 aaPredicted RBP17.07■□□□□ 0.32
CSDC2-201ENST00000306149 RABGGTAQ92696 567 aa17.07■□□□□ 0.32
CSDC2-201ENST00000306149 MKNK2Q9HBH9 465 aa17.07■□□□□ 0.32
CSDC2-201ENST00000306149 SCN7AQ01118 1682 aa17.07■□□□□ 0.32
CSDC2-201ENST00000306149 KCNJ18B7U540 433 aa17.07■□□□□ 0.32
CSDC2-201ENST00000306149 PES1O00541 588 aaKnown RBP17.07■□□□□ 0.32
CSDC2-201ENST00000306149 CYP2C19P33261 490 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms