RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 RSBN1LQ6PCB5 846 aaPredicted RBP13.25□□□□□ -0.29
PCF11-201ENST00000298281 TMCO5AQ8N6Q1 288 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 CDC26Q8NHZ8 85 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 PA2G4Q9UQ80 394 aaKnown RBP13.25□□□□□ -0.29
PCF11-201ENST00000298281 GSTA4O15217 222 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 FCHSD1Q86WN1 690 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 ARHGDIAP52565 204 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 ABI1Q8IZP0 508 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 C19orf44Q9H6X5 657 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 OGFRQ9NZT2 677 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 KCNH3Q9ULD8 1083 aa13.25□□□□□ -0.29
PCF11-201ENST00000298281 ZBBXA8MT70 800 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 CCNT1O60563 726 aaKnown RBP13.24□□□□□ -0.29
PCF11-201ENST00000298281 ANO1Q5XXA6 986 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 APPBP2Q92624 585 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 KRT82Q9NSB4 513 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 CCPG1Q9ULG6 757 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 SH3TC1Q8TE82 1336 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 HIBADHP31937 336 aaKnown RBP13.24□□□□□ -0.29
PCF11-201ENST00000298281 EVCP57679 992 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 PPP2R5EQ16537 467 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 FAM71BQ8TC56 605 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 PARP2Q9UGN5 583 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 DNM3Q9UQ16 869 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 FAF1Q9UNN5 650 aaPredicted RBP13.24□□□□□ -0.29
PCF11-201ENST00000298281 RPS6KB1P23443 525 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 PAK1Q13153 545 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 MTMR3Q13615 1198 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 POTEDQ86YR6 584 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 CTAGE3PQ8IX95 158 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 SUPT20HQ8NEM7 779 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 LRRC59Q96AG4 307 aaKnown RBP13.24□□□□□ -0.29
PCF11-201ENST00000298281 JAG2Q9Y219 1238 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 FAM170AA1A519 330 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 HLA-DPA1P20036 260 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 SKIV2LQ15477 1246 aaKnown RBP13.24□□□□□ -0.29
PCF11-201ENST00000298281 ZC3H12BQ5HYM0 836 aaKnown RBP13.24□□□□□ -0.29
PCF11-201ENST00000298281 ALKBH8Q96BT7 664 aaKnown RBP13.24□□□□□ -0.29
PCF11-201ENST00000298281 ABHD8Q96I13 439 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 C8orf37Q96NL8 207 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 CTNND2Q9UQB3 1225 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 CD19P15391 556 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 LMNB1P20700 586 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 ZNF174Q15697 407 aa13.24□□□□□ -0.29
PCF11-201ENST00000298281 SYNRGQ9UMZ2 1314 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 EYA2O00167 538 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 EFCAB14O75071 495 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 PRPSAP1Q14558 356 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 HSP90AA5PQ58FG0 334 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 MMS19Q96T76 1030 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 SYNDIG1Q9H7V2 258 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 SAP30BPQ9UHR5 308 aaKnown RBP13.23□□□□□ -0.29
PCF11-201ENST00000298281 TPX2Q9ULW0 747 aaKnown RBP13.23□□□□□ -0.29
PCF11-201ENST00000298281 GNA14O95837 355 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 GPCPD1Q9NPB8 672 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 NPATQ14207 1427 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 MTRQ99707 1265 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 MMTAG2Q9BU76 263 aaKnown RBP13.23□□□□□ -0.29
PCF11-201ENST00000298281 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
PCF11-201ENST00000298281 EIF6P56537 245 aaKnown RBP13.23□□□□□ -0.29
PCF11-201ENST00000298281 PLBD2Q8NHP8 589 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 Q9H521 79 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.23□□□□□ -0.29
PCF11-201ENST00000298281 MYCP01106 439 aaPredicted RBP13.23□□□□□ -0.29
PCF11-201ENST00000298281 SESTD1Q86VW0 696 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 POLR3CQ9BUI4 534 aaPredicted RBP13.23□□□□□ -0.29
PCF11-201ENST00000298281 BICC1Q9H694 974 aaKnown RBP13.23□□□□□ -0.29
PCF11-201ENST00000298281 SLC5A4Q9NY91 659 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 PPFIA4O75335 1185 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 KSR1Q8IVT5 923 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 METTL14Q9HCE5 456 aaKnown RBP13.23□□□□□ -0.29
PCF11-201ENST00000298281 RTEL1Q9NZ71 1219 aa13.23□□□□□ -0.29
PCF11-201ENST00000298281 H0YC42 278 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 RASSF2P50749 326 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 RPGRIP1Q96KN7 1286 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 A0A1B0GVL5 298 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 H3BRJ5 948 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 ZBED4O75132 1171 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 VAMP4O75379 141 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 TRIM59Q8IWR1 403 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 TTC1Q99614 292 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 GGA1Q9UJY5 639 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 NDUFAB1O14561 156 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 ZNF263O14978 683 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 PAK2Q13177 524 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 WHAMMP3Q1A5X7 153 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 PLEKHM2Q8IWE5 1019 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 COG4Q9H9E3 785 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 EPS15L1Q9UBC2 864 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 SYNJ2BP-COX16A0A087WUM0 186 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 MTHFSDQ2M296 383 aaKnown RBP13.22□□□□□ -0.29
PCF11-201ENST00000298281 DENND2CQ68D51 928 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 SECISBP2LQ93073 1101 aaKnown RBP13.22□□□□□ -0.29
PCF11-201ENST00000298281 COX16Q9P0S2 106 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 MYO1AQ9UBC5 1043 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 PDE8AO60658 829 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 ARHGAP25P42331 645 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 GPR162Q16538 588 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 TBC1D22AQ8WUA7 517 aa13.22□□□□□ -0.29
PCF11-201ENST00000298281 NT5C3AQ9H0P0 336 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms