RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 ENAHQ8N8S7 591 aaPredicted RBP18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 NLRC4Q9NPP4 1024 aa18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 HDAC6Q9UBN7 1215 aa18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 TRIM10Q9UDY6 481 aa18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 SLFN14P0C7P3 912 aa18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 COPB1P53618 953 aaKnown RBP18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 PTPAQ15257 358 aa18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 TYW1BQ6NUM6 668 aa18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 GSPT2Q8IYD1 628 aaKnown RBP18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 IFT81Q8WYA0 676 aa18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 FBXO2Q9UK22 296 aaPredicted RBP18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 B4DLN1 442 aa18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 USO1O60763 962 aaKnown RBP18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 HIBADHP31937 336 aaKnown RBP18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 FAN1Q9Y2M0 1017 aa18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 KRT86O43790 486 aa18.16■□□□□ 0.5
PDZRN3-201ENST00000263666 TADA3O75528 432 aa18.16■□□□□ 0.5
PDZRN3-201ENST00000263666 ARID4AP29374 1257 aaPredicted RBP18.16■□□□□ 0.5
PDZRN3-201ENST00000263666 CXCR5P32302 372 aa18.16■□□□□ 0.5
PDZRN3-201ENST00000263666 NOP2P46087 812 aaKnown RBP18.16■□□□□ 0.5
PDZRN3-201ENST00000263666 KRT31Q15323 416 aa18.16■□□□□ 0.5
PDZRN3-201ENST00000263666 MST1RQ04912 1400 aa18.16■□□□□ 0.5
PDZRN3-201ENST00000263666 TMTC1Q8IUR5 882 aa18.16■□□□□ 0.5
PDZRN3-201ENST00000263666 TC2NQ8N9U0 490 aa18.16■□□□□ 0.5
PDZRN3-201ENST00000263666 JAKMIP2Q96AA8 810 aa18.16■□□□□ 0.5
PDZRN3-201ENST00000263666 GPCPD1Q9NPB8 672 aa18.16■□□□□ 0.5
PDZRN3-201ENST00000263666 RAD9BQ6WBX8 426 aa18.16■□□□□ 0.5
PDZRN3-201ENST00000263666 SCG2P13521 617 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 IL6STP40189 918 aaPredicted RBP18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 TECP42680 631 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 PAFAH1B1P43034 410 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 TOB1P50616 345 aaPredicted RBP18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 CC2D1AQ6P1N0 951 aaPredicted RBP18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 FERMT2Q96AC1 680 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 ABCB6Q9NP58 842 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 SLC39A2Q9NP94 309 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 CDC23Q9UJX2 597 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 TTF2Q9UNY4 1162 aaKnown RBP18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 RPN1P04843 607 aaKnown RBP18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 PRDX5P30044 214 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 DIXDC1Q155Q3 683 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 SRGAP1Q7Z6B7 1085 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 AGXT2Q9BYV1 514 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 TUBE1Q9UJT0 475 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 PARP3Q9Y6F1 533 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 EPN1Q9Y6I3 576 aaPredicted RBP18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 AFF2P51816 1311 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 NRXN3Q9Y4C0 1643 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 ZEB2O60315 1214 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 CALM1P0DP23 149 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 CALM2P0DP24 149 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 CALM3P0DP25 149 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 FXR1P51114 621 aaKnown RBP eCLIP18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 MAP9Q49MG5 647 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 ODF2Q5BJF6 829 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 SLC44A5Q8NCS7 719 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 PNMA1Q8ND90 353 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 BIN2Q9UBW5 565 aaPredicted RBP18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 USP17L3A6NCW0 530 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 USP17L4A6NCW7 530 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 USP17L1Q7RTZ2 530 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 REXO1L1PQ8IX06 675 aa18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 BMP2KQ9NSY1 1161 aaPredicted RBP18.15■□□□□ 0.5
PDZRN3-201ENST00000263666 SALL1Q9NSC2 1324 aa18.14■□□□□ 0.5
PDZRN3-201ENST00000263666 UBR1Q8IWV7 1749 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 TMCO5BA8MYB1 307 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 CALML3P27482 149 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 ERFEQ4G0M1 354 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 CERKQ8TCT0 537 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 BPIFA3Q9BQP9 254 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 RBM28Q9NW13 759 aaKnown RBP18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 FBXO3Q9UK99 471 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 THRAP3Q9Y2W1 955 aaKnown RBP18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 RFX7Q2KHR2 1363 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 POTEB2H3BUK9 544 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 C2CD5Q86YS7 1000 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 HPS3Q969F9 1004 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 CHP1Q99653 195 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 POLD4Q9HCU8 107 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 ZNF446Q9NWS9 450 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 MYO6Q9UM54 1294 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 CPDO75976 1380 aa18.14■□□□□ 0.49
PDZRN3-201ENST00000263666 RIMBP2O15034 1052 aa18.13■□□□□ 0.49
PDZRN3-201ENST00000263666 LDHBP07195 334 aaKnown RBP18.13■□□□□ 0.49
PDZRN3-201ENST00000263666 EARS2Q5JPH6 523 aaKnown RBP18.13■□□□□ 0.49
PDZRN3-201ENST00000263666 NELFCDQ8IXH7 590 aa18.13■□□□□ 0.49
PDZRN3-201ENST00000263666 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.13■□□□□ 0.49
PDZRN3-201ENST00000263666 RABGGTAQ92696 567 aa18.13■□□□□ 0.49
PDZRN3-201ENST00000263666 RNF26Q9BY78 433 aaPredicted RBP18.13■□□□□ 0.49
PDZRN3-201ENST00000263666 PIK3C2AO00443 1686 aa18.13■□□□□ 0.49
PDZRN3-201ENST00000263666 FAM196AQ6ZSG2 479 aa18.13■□□□□ 0.49
PDZRN3-201ENST00000263666 BLIDQ8IZY5 108 aa18.13■□□□□ 0.49
PDZRN3-201ENST00000263666 OR8K1Q8NGG5 319 aa18.13■□□□□ 0.49
PDZRN3-201ENST00000263666 NBPF3Q9H094 633 aa18.13■□□□□ 0.49
PDZRN3-201ENST00000263666 ATP2C2O75185 946 aa18.13■□□□□ 0.49
PDZRN3-201ENST00000263666 BMP6P22004 513 aa18.13■□□□□ 0.49
PDZRN3-201ENST00000263666 ADGRG1Q9Y653 693 aa18.13■□□□□ 0.49
PDZRN3-201ENST00000263666 PARP1P09874 1014 aaKnown RBP18.12■□□□□ 0.49
PDZRN3-201ENST00000263666 CD44P16070 742 aaKnown RBP18.12■□□□□ 0.49
PDZRN3-201ENST00000263666 PRPF4BQ13523 1007 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms