RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 TMEM39AQ9NV64 488 aa16.68■□□□□ 0.26
DDX39A-201ENST00000242776 PHF24Q9UPV7 400 aa16.68■□□□□ 0.26
DDX39A-201ENST00000242776 EXOC6BQ9Y2D4 811 aa16.68■□□□□ 0.26
DDX39A-201ENST00000242776 TACC3Q9Y6A5 838 aa16.68■□□□□ 0.26
DDX39A-201ENST00000242776 APBB1O00213 710 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 AKR1B1P15121 316 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 TMEM132BQ14DG7 1078 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 SLC9C2Q5TAH2 1124 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 RNF180Q86T96 592 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 DNAJC2Q99543 621 aaKnown RBP16.67■□□□□ 0.26
DDX39A-201ENST00000242776 MYO9BQ13459 2157 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 A0A1W2PQ45 241 aaPredicted RBP16.67■□□□□ 0.26
DDX39A-201ENST00000242776 A0A1W2PQY0 241 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 SMIM22K7EJ46 135 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 PDE6AP16499 860 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 SLC4A3P48751 1232 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 ICA1Q05084 483 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 FPGSQ05932 587 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 SLFNL1Q499Z3 407 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 TMEM179Q6ZVK1 233 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 LCORLQ8N3X6 602 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 MB21D1Q8N884 522 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 ARMT1Q9H993 441 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 ARHGEF10LQ9HCE6 1279 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 FBXO28Q9NVF7 368 aa16.67■□□□□ 0.26
DDX39A-201ENST00000242776 NOP58Q9Y2X3 529 aaKnown RBP16.67■□□□□ 0.26
DDX39A-201ENST00000242776 SUPT16HQ9Y5B9 1047 aaKnown RBP16.67■□□□□ 0.26
DDX39A-201ENST00000242776 ZNF532Q9HCE3 1301 aa16.66■□□□□ 0.26
DDX39A-201ENST00000242776 CYP2D7A0A087X1C5 515 aa16.66■□□□□ 0.26
DDX39A-201ENST00000242776 IGSF3O75054 1194 aa16.66■□□□□ 0.26
DDX39A-201ENST00000242776 DNAJB2P25686 324 aa16.66■□□□□ 0.26
DDX39A-201ENST00000242776 SIAH1Q8IUQ4 282 aa16.66■□□□□ 0.26
DDX39A-201ENST00000242776 FTSJ3Q8IY81 847 aaKnown RBP16.66■□□□□ 0.26
DDX39A-201ENST00000242776 SYMPKQ92797 1274 aaKnown RBP16.66■□□□□ 0.26
DDX39A-201ENST00000242776 RAPGEFL1Q9UHV5 662 aa16.66■□□□□ 0.26
DDX39A-201ENST00000242776 GOLIM4O00461 696 aa16.65■□□□□ 0.26
DDX39A-201ENST00000242776 PRKAB2O43741 272 aa16.65■□□□□ 0.26
DDX39A-201ENST00000242776 ABRAQ8N0Z2 381 aa16.65■□□□□ 0.26
DDX39A-201ENST00000242776 VCPKMTQ9H867 229 aa16.65■□□□□ 0.26
DDX39A-201ENST00000242776 DCP1AQ9NPI6 582 aaPredicted RBP16.65■□□□□ 0.26
DDX39A-201ENST00000242776 GRXCR1A8MXD5 290 aa16.64■□□□□ 0.25
DDX39A-201ENST00000242776 KIAA0355O15063 1070 aa16.64■□□□□ 0.25
DDX39A-201ENST00000242776 IRX5P78411 483 aaPredicted RBP16.64■□□□□ 0.25
DDX39A-201ENST00000242776 KCTD2Q14681 263 aa16.64■□□□□ 0.25
DDX39A-201ENST00000242776 C1orf53Q5VUE5 145 aa16.64■□□□□ 0.25
DDX39A-201ENST00000242776 CCDC129Q6ZRS4 1044 aa16.64■□□□□ 0.25
DDX39A-201ENST00000242776 TINF2Q9BSI4 451 aa16.64■□□□□ 0.25
DDX39A-201ENST00000242776 STARD7Q9NQZ5 370 aa16.64■□□□□ 0.25
DDX39A-201ENST00000242776 TMX2Q9Y320 296 aa16.64■□□□□ 0.25
DDX39A-201ENST00000242776 MCM3APO60318 1980 aa16.64■□□□□ 0.25
DDX39A-201ENST00000242776 TTC28Q96AY4 2481 aa16.63■□□□□ 0.25
DDX39A-201ENST00000242776 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-201ENST00000242776 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-201ENST00000242776 RLBP1P12271 317 aa16.63■□□□□ 0.25
DDX39A-201ENST00000242776 FAAP100Q0VG06 881 aa16.63■□□□□ 0.25
DDX39A-201ENST00000242776 TJAP1Q5JTD0 557 aa16.63■□□□□ 0.25
DDX39A-201ENST00000242776 TIFAQ96CG3 184 aa16.63■□□□□ 0.25
DDX39A-201ENST00000242776 ZNF576Q9H609 170 aa16.63■□□□□ 0.25
DDX39A-201ENST00000242776 WDR46O15213 610 aaKnown RBP16.62■□□□□ 0.25
DDX39A-201ENST00000242776 SLC25A27O95847 323 aa16.62■□□□□ 0.25
DDX39A-201ENST00000242776 ZNF865P0CJ78 1059 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-201ENST00000242776 AKR1A1P14550 325 aa16.62■□□□□ 0.25
DDX39A-201ENST00000242776 COL9A1P20849 921 aa16.62■□□□□ 0.25
DDX39A-201ENST00000242776 PBX2P40425 430 aa16.62■□□□□ 0.25
DDX39A-201ENST00000242776 ACLYP53396 1101 aa16.62■□□□□ 0.25
DDX39A-201ENST00000242776 TTF1Q15361 905 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-201ENST00000242776 ZNF792Q3KQV3 632 aa16.62■□□□□ 0.25
DDX39A-201ENST00000242776 FAM83BQ5T0W9 1011 aa16.62■□□□□ 0.25
DDX39A-201ENST00000242776 STK11IPQ8N1F8 1099 aa16.62■□□□□ 0.25
DDX39A-201ENST00000242776 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.62■□□□□ 0.251e-9■■□□□ 11.7
DDX39A-201ENST00000242776 SH2D4AQ9H788 454 aa16.62■□□□□ 0.25
DDX39A-201ENST00000242776 SWAP70Q9UH65 585 aa16.62■□□□□ 0.25
DDX39A-201ENST00000242776 ZHX1Q9UKY1 873 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-201ENST00000242776 MYADML2A6NDP7 307 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 DCDC2CA8MYV0 355 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 TNFRSF10AO00220 468 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 MBD4O95243 580 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 EEF2P13639 858 aaKnown RBP16.61■□□□□ 0.25
DDX39A-201ENST00000242776 STAT3P40763 770 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 CCDC85BQ15834 202 aaPredicted RBP16.61■□□□□ 0.25
DDX39A-201ENST00000242776 CEP85Q6P2H3 762 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 VTI1AQ96AJ9 217 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 PRDM12Q9H4Q4 367 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 CNPY2Q9Y2B0 182 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 GBF1Q92538 1859 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 SYNRGQ9UMZ2 1314 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 TMEM265A0A087WTH1 108 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 TCRBV5S4A2TA0A5A2 114 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 ADAMTS4O75173 837 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 CHGBP05060 677 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 ACRP10323 421 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 CDK8P49336 464 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 KCNA10Q16322 511 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 RIOX2Q8IUF8 465 aa16.61■□□□□ 0.25
DDX39A-201ENST00000242776 NUP88Q99567 741 aaPredicted RBP16.61■□□□□ 0.25
DDX39A-201ENST00000242776 VWA5AO00534 786 aa16.6■□□□□ 0.25
DDX39A-201ENST00000242776 ERC1Q8IUD2 1116 aa16.6■□□□□ 0.25
DDX39A-201ENST00000242776 GAS2L1Q99501 681 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-201ENST00000242776 PPP1R12CQ9BZL4 782 aa16.6■□□□□ 0.25
DDX39A-201ENST00000242776 USP17L12C9JPN9 530 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms