RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 WDR18Q9BV38 432 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 CNNM2Q9H8M5 875 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 ELP3Q9H9T3 547 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 MKNK2Q9HBH9 465 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 ZCCHC17Q9NP64 241 aaKnown RBP11.96□□□□□ -0.49
PHGDH-224ENST00000641711 BRPF3Q9ULD4 1205 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 SYNPO2Q9UMS6 1093 aa11.96□□□□□ -0.49
PHGDH-224ENST00000641711 CYP2D7A0A087X1C5 515 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 FAM196BA6NMK8 535 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 ZNF213O14771 459 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 RASA1P20936 1047 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 MCM5P33992 734 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 VEGFBP49765 207 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 GTF2A2P52657 109 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 UBE2HP62256 183 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 FGD1P98174 961 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 SNAPC2Q13487 334 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 AKNAD1Q5T1N1 836 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 CYP4F22Q6NT55 531 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 NCOA7Q8NI08 942 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 ZKSCAN4Q969J2 545 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-224ENST00000641711 SH2D4AQ9H788 454 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 TMEM63CQ9P1W3 806 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 FZD1Q9UP38 647 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 CNPY2Q9Y2B0 182 aa11.95□□□□□ -0.5
PHGDH-224ENST00000641711 ELP1O95163 1332 aa11.94□□□□□ -0.5
PHGDH-224ENST00000641711 TESPA1A2RU30 521 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-224ENST00000641711 VPS37CA5D8V6 355 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-224ENST00000641711 C19orf81C9J6K1 198 aa11.94□□□□□ -0.5
PHGDH-224ENST00000641711 CA12O43570 354 aa11.94□□□□□ -0.5
PHGDH-224ENST00000641711 GH2P01242 217 aa11.94□□□□□ -0.5
PHGDH-224ENST00000641711 CETPP11597 493 aa11.94□□□□□ -0.5
PHGDH-224ENST00000641711 PDIA3P30101 505 aaKnown RBP11.94□□□□□ -0.5
PHGDH-224ENST00000641711 MAP2K1Q02750 393 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-224ENST00000641711 SLC4A8Q2Y0W8 1093 aa11.94□□□□□ -0.5
PHGDH-224ENST00000641711 ZNF444Q8N0Y2 327 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-224ENST00000641711 DNAJC5GQ8N7S2 189 aa11.94□□□□□ -0.5
PHGDH-224ENST00000641711 JMYQ8N9B5 988 aa11.94□□□□□ -0.5
PHGDH-224ENST00000641711 SLC44A5Q8NCS7 719 aa11.94□□□□□ -0.5
PHGDH-224ENST00000641711 RGS22Q8NE09 1264 aa11.94□□□□□ -0.5
PHGDH-224ENST00000641711 NSUN7Q8NE18 718 aaKnown RBP11.94□□□□□ -0.5
PHGDH-224ENST00000641711 DYNLL2Q96FJ2 89 aa11.94□□□□□ -0.5
PHGDH-224ENST00000641711 OTUD5Q96G74 571 aa11.94□□□□□ -0.5
PHGDH-224ENST00000641711 LRRC2Q9BYS8 371 aa11.94□□□□□ -0.5
PHGDH-224ENST00000641711 KANSL2Q9H9L4 492 aa11.94□□□□□ -0.5
PHGDH-224ENST00000641711 KIF3AQ9Y496 699 aa11.94□□□□□ -0.5
PHGDH-224ENST00000641711 JAK2O60674 1132 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 GADD45BO75293 160 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-224ENST00000641711 GDF11O95390 407 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 CTDNEP1O95476 244 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 ALDH1A1P00352 501 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 USP14P54578 494 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 DNM1Q05193 864 aaKnown RBP11.93□□□□□ -0.5
PHGDH-224ENST00000641711 APOBRQ0VD83 1088 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 STK3Q13188 491 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 CCDC178Q5BJE1 867 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 SH3D19Q5HYK7 790 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 OTUD7BQ6GQQ9 843 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 LRSAM1Q6UWE0 723 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 MFSD6Q6ZSS7 791 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 RALYLQ86SE5 291 aaKnown RBP11.93□□□□□ -0.5
PHGDH-224ENST00000641711 PROCA1Q8NCQ7 364 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-224ENST00000641711 ZNF280CQ8ND82 737 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 NEDD1Q8NHV4 660 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 ESR2Q92731 530 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 KRT23Q9C075 422 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 GDPD2Q9HCC8 539 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 ARHGEF10LQ9HCE6 1279 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 RBM27Q9P2N5 1060 aaKnown RBP11.93□□□□□ -0.5
PHGDH-224ENST00000641711 AFG3L2Q9Y4W6 797 aa11.93□□□□□ -0.5
PHGDH-224ENST00000641711 A0A0G2JLL6 359 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-224ENST00000641711 IRF6O14896 467 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 PRC1O43663 620 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 LETM1O95202 739 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-224ENST00000641711 GJA5P36382 358 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 TM4SF4P48230 202 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 ANTXR2P58335 489 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 HAND2P61296 217 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 KRT85P78386 507 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 HTRA3P83110 453 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 EVX2Q03828 476 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 ICA1Q05084 483 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 TRDNQ13061 729 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 RRP1BQ14684 758 aaKnown RBP11.92□□□□□ -0.5
PHGDH-224ENST00000641711 FASTKD5Q7L8L6 764 aaKnown RBP11.92□□□□□ -0.5
PHGDH-224ENST00000641711 PRRT2Q7Z6L0 340 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-224ENST00000641711 C12orf42Q96LP6 360 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 MTA3Q9BTC8 594 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 CFHR5Q9BXR6 569 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 PANK2Q9BZ23 570 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 NBPF3Q9H094 633 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 KIAA1683Q9H0B3 1180 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 ZSCAN16Q9H4T2 348 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-224ENST00000641711 TCP11L1Q9NUJ3 509 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 SAGE1Q9NXZ1 904 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 NYAP2Q9P242 653 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 SLC45A1Q9Y2W3 748 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 ZHX2Q9Y6X8 837 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 TCHHQ07283 1943 aa11.92□□□□□ -0.5
PHGDH-224ENST00000641711 IGKV6D-41A0A0C4DH26 115 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms