RNA–Protein interactions for RNA: ENST00000628515.2

NRXN1-229, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-229	ENST00000628515	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	18.21	■□□□□ 0.51
NRXN1-229	ENST00000628515	MYO6	Q9UM54	1294 aa		18.21	■□□□□ 0.51
NRXN1-229	ENST00000628515	TACC3	Q9Y6A5	838 aa		18.21	■□□□□ 0.51
NRXN1-229	ENST00000628515	STRBP	Q96SI9	672 aa	Known RBP	18.21	■□□□□ 0.51
NRXN1-229	ENST00000628515	CHP1	Q99653	195 aa		18.21	■□□□□ 0.51
NRXN1-229	ENST00000628515	NAA15	Q9BXJ9	866 aa	Known RBP	18.21	■□□□□ 0.51
NRXN1-229	ENST00000628515	TTF2	Q9UNY4	1162 aa	Known RBP	18.21	■□□□□ 0.51
NRXN1-229	ENST00000628515	DPYD	Q12882	1025 aa		18.21	■□□□□ 0.51
NRXN1-229	ENST00000628515	NOM1	Q5C9Z4	860 aa	Known RBP	18.21	■□□□□ 0.51
NRXN1-229	ENST00000628515	EARS2	Q5JPH6	523 aa	Known RBP	18.21	■□□□□ 0.51
NRXN1-229	ENST00000628515	CAGE1	Q8TC20	777 aa		18.21	■□□□□ 0.51
NRXN1-229	ENST00000628515	GBP3	Q9H0R5	595 aa		18.21	■□□□□ 0.51
NRXN1-229	ENST00000628515	PSD3	Q9NYI0	1048 aa		18.21	■□□□□ 0.51
NRXN1-229	ENST00000628515	RNF40	O75150	1001 aa		18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	KRT31	Q15323	416 aa		18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	APTX	Q7Z2E3	356 aa	Known RBP	18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	MSANTD4	Q8NCY6	345 aa		18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	CCDC148	Q8NFR7	591 aa		18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	ACBD3	Q9H3P7	528 aa		18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	USP21	Q9UK80	565 aa		18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	DEXI	O95424	95 aa		18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	TTF1	Q15361	905 aa	Predicted RBP	18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	AKNAD1	Q5T1N1	836 aa		18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	NT5DC1	Q5TFE4	455 aa		18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	SGMS1	Q86VZ5	419 aa		18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	GPIHBP1	Q8IV16	184 aa		18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	HNRNPLL	Q8WVV9	542 aa	Known RBP	18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	CTAGE1	Q96RT6	745 aa		18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	UBAC1	Q9BSL1	405 aa		18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	RAB21	Q9UL25	225 aa		18.2	■□□□□ 0.5
NRXN1-229	ENST00000628515	IRS4	O14654	1257 aa	Predicted RBP	18.19	■□□□□ 0.5
NRXN1-229	ENST00000628515	FOXP1	Q9H334	677 aa	Predicted RBP	18.19	■□□□□ 0.5
NRXN1-229	ENST00000628515	SLC4A4	Q9Y6R1	1079 aa		18.19	■□□□□ 0.5
NRXN1-229	ENST00000628515	IRX3	P78415	501 aa	Predicted RBP	18.19	■□□□□ 0.5
NRXN1-229	ENST00000628515	UBXN1	Q04323	297 aa		18.19	■□□□□ 0.5
NRXN1-229	ENST00000628515	ABHD10	Q9NUJ1	306 aa		18.19	■□□□□ 0.5
NRXN1-229	ENST00000628515	WNT7A	O00755	349 aa		18.19	■□□□□ 0.5
NRXN1-229	ENST00000628515	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	18.19	■□□□□ 0.5
NRXN1-229	ENST00000628515	SECISBP2L	Q93073	1101 aa	Known RBP	18.19	■□□□□ 0.5
NRXN1-229	ENST00000628515	MAP3K15	Q6ZN16	1313 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	KCP	Q6ZWJ8	1503 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	EIF3CL	B5ME19	914 aa	Known RBP	18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	NLRP10	Q86W26	655 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	TMTC1	Q8IUR5	882 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	ZNF654	Q8IZM8	581 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	ANKRD20A12P	Q8NF67	263 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	RASSF8	Q8NHQ8	419 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	FAM71B	Q8TC56	605 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	EIF3C	Q99613	913 aa	Known RBP	18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	ANKRD18B	A2A2Z9	1011 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	SMIM22	K7EJ46	135 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	LIFR	P42702	1097 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	MRPS25	P82663	173 aa	Known RBP	18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	CUL4B	Q13620	913 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	WHAMMP3	Q1A5X7	153 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	FKBP15	Q5T1M5	1219 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	CYP26C1	Q6V0L0	522 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	TICAM2	Q86XR7	235 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	TTLL11	Q8NHH1	800 aa		18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	BAZ2B	Q9UIF8	2168 aa	Known RBP	18.18	■□□□□ 0.5
NRXN1-229	ENST00000628515	USP5	P45974	858 aa		18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	UBE3C	Q15386	1083 aa		18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	LRRC31	Q6UY01	552 aa		18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	FANCB	Q8NB91	859 aa		18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	PATL2	C9JE40	543 aa	Known RBP	18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	TTC31	Q49AM3	519 aa	Predicted RBP	18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	SMARCC1	Q92922	1105 aa	Predicted RBP	18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	NIP7	Q9Y221	180 aa	Known RBP eCLIP	18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	SPATA31A5	Q5VU36	1347 aa		18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	SPATA31A7	Q8IWB4	1347 aa		18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	BCL9	O00512	1426 aa		18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	C4A	P0C0L4	1744 aa		18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	C4B	P0C0L5	1744 aa		18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	PPP1R3G	B7ZBB8	358 aa		18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	AFAP1L1	Q8TED9	768 aa		18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	KRT23	Q9C075	422 aa		18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	RIPOR2	Q9Y4F9	1068 aa		18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515		V9GY48	417 aa	Predicted RBP	18.17	■□□□□ 0.5
NRXN1-229	ENST00000628515	COPB1	P53618	953 aa	Known RBP	18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	CCDC122	Q5T0U0	273 aa		18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	CTR9	Q6PD62	1173 aa		18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	KIAA1328	Q86T90	577 aa		18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	LCORL	Q8N3X6	602 aa		18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	PKD1L3	Q7Z443	1732 aa		18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	ABCA3	Q99758	1704 aa		18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	NHSL1	Q5SYE7	1610 aa		18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	WTIP	A6NIX2	430 aa	Predicted RBP	18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	HSPA1L	P34931	641 aa		18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	ARHGAP25	P42331	645 aa		18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	MAP3K12	Q12852	859 aa		18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	TSR1	Q2NL82	804 aa	Known RBP	18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	PCMTD1	Q96MG8	357 aa	Predicted RBP	18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	MMS19	Q96T76	1030 aa		18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	ISCA1	Q9BUE6	129 aa		18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	STK36	Q9NRP7	1315 aa		18.16	■□□□□ 0.5
NRXN1-229	ENST00000628515	CDKAL1	Q5VV42	579 aa		18.15	■□□□□ 0.5
NRXN1-229	ENST00000628515	PLIN2	Q99541	437 aa		18.15	■□□□□ 0.5
NRXN1-229	ENST00000628515	CRACR2A	Q9BSW2	395 aa		18.15	■□□□□ 0.5

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