RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 VCAM1P19320 739 aa21.9■■□□□ 1.1
CIRBP-245ENST00000621399 OSBPP22059 807 aa21.9■■□□□ 1.1
CIRBP-245ENST00000621399 STOX1Q6ZVD7 989 aa21.9■■□□□ 1.1
CIRBP-245ENST00000621399 IQCA1Q86XH1 822 aa21.9■■□□□ 1.1
CIRBP-245ENST00000621399 SPICE1Q8N0Z3 855 aa21.9■■□□□ 1.1
CIRBP-245ENST00000621399 NCOA7Q8NI08 942 aa21.9■■□□□ 1.1
CIRBP-245ENST00000621399 LPAR1Q92633 364 aa21.9■■□□□ 1.1
CIRBP-245ENST00000621399 PARK7Q99497 189 aaKnown RBP21.9■■□□□ 1.1
CIRBP-245ENST00000621399 ZKSCAN3Q9BRR0 538 aa21.9■■□□□ 1.1
CIRBP-245ENST00000621399 CFHR5Q9BXR6 569 aa21.9■■□□□ 1.1
CIRBP-245ENST00000621399 PNMA3Q9UL41 463 aa21.9■■□□□ 1.1
CIRBP-245ENST00000621399 CYP2C8P10632 490 aa21.89■■□□□ 1.09
CIRBP-245ENST00000621399 ZKSCAN1P17029 563 aaPredicted RBP21.89■■□□□ 1.09
CIRBP-245ENST00000621399 CTCFP49711 727 aaPredicted RBP21.89■■□□□ 1.09
CIRBP-245ENST00000621399 KIAA1755Q5JYT7 1200 aa21.89■■□□□ 1.09
CIRBP-245ENST00000621399 LRRC47Q8N1G4 583 aaKnown RBP21.89■■□□□ 1.09
CIRBP-245ENST00000621399 R3HDMLQ9H3Y0 253 aa21.89■■□□□ 1.09
CIRBP-245ENST00000621399 SYNPO2Q9UMS6 1093 aa21.89■■□□□ 1.09
CIRBP-245ENST00000621399 USP17L15C9J2P7 530 aa21.88■■□□□ 1.09
CIRBP-245ENST00000621399 USP17L13C9JLJ4 530 aa21.88■■□□□ 1.09
CIRBP-245ENST00000621399 USP17L11C9JVI0 530 aa21.88■■□□□ 1.09
CIRBP-245ENST00000621399 USP17L18D6R9N7 530 aa21.88■■□□□ 1.09
CIRBP-245ENST00000621399 USP17L22D6RA61 530 aa21.88■■□□□ 1.09
CIRBP-245ENST00000621399 USP17L17D6RBQ6 530 aa21.88■■□□□ 1.09
CIRBP-245ENST00000621399 USP17L19D6RCP7 530 aa21.88■■□□□ 1.09
CIRBP-245ENST00000621399 USP17L20D6RJB6 530 aa21.88■■□□□ 1.09
CIRBP-245ENST00000621399 F5H6K3 240 aa21.88■■□□□ 1.09
CIRBP-245ENST00000621399 HOXA7P31268 230 aaPredicted RBP21.88■■□□□ 1.09
CIRBP-245ENST00000621399 IRX3P78415 501 aaPredicted RBP21.88■■□□□ 1.09
CIRBP-245ENST00000621399 KLRC3Q07444 240 aa21.88■■□□□ 1.09
CIRBP-245ENST00000621399 USP17L24Q0WX57 530 aa21.88■■□□□ 1.09
CIRBP-245ENST00000621399 CCDC178Q5BJE1 867 aa21.88■■□□□ 1.09
CIRBP-245ENST00000621399 TTC14Q96N46 770 aa21.88■■□□□ 1.09
CIRBP-245ENST00000621399 ZSCAN10Q96SZ4 725 aaPredicted RBP21.88■■□□□ 1.09
CIRBP-245ENST00000621399 UBAC1Q9BSL1 405 aa21.88■■□□□ 1.09
CIRBP-245ENST00000621399 ASCC2Q9H1I8 757 aaPredicted RBP21.88■■□□□ 1.09
CIRBP-245ENST00000621399 RPAP3Q9H6T3 665 aaPredicted RBP21.88■■□□□ 1.09
CIRBP-245ENST00000621399 GREB1LQ9C091 1923 aaPredicted RBP21.88■■□□□ 1.09
CIRBP-245ENST00000621399 EPB41L2O43491 1005 aaKnown RBP21.87■■□□□ 1.09
CIRBP-245ENST00000621399 EIF5BO60841 1220 aaKnown RBP21.87■■□□□ 1.09
CIRBP-245ENST00000621399 HSPA8P11142 646 aaKnown RBP21.87■■□□□ 1.09
CIRBP-245ENST00000621399 HSPA4P34932 840 aa21.87■■□□□ 1.09
CIRBP-245ENST00000621399 NOVP48745 357 aa21.87■■□□□ 1.09
CIRBP-245ENST00000621399 CYB5R4Q7L1T6 521 aa21.87■■□□□ 1.09
CIRBP-245ENST00000621399 SMCR8Q8TEV9 937 aaPredicted RBP21.87■■□□□ 1.09
CIRBP-245ENST00000621399 TLR2O60603 784 aa21.86■■□□□ 1.09
CIRBP-245ENST00000621399 TOP1P11387 765 aaKnown RBP21.86■■□□□ 1.09
CIRBP-245ENST00000621399 LBX1P52954 281 aa21.86■■□□□ 1.09
CIRBP-245ENST00000621399 CATSPERGQ6ZRH7 1159 aa21.86■■□□□ 1.09
CIRBP-245ENST00000621399 DGKHQ86XP1 1220 aa21.86■■□□□ 1.09
CIRBP-245ENST00000621399 RASEFQ8IZ41 740 aa21.86■■□□□ 1.09
CIRBP-245ENST00000621399 GMCL1P1Q8NEA9 526 aa21.86■■□□□ 1.09
CIRBP-245ENST00000621399 TMEM47Q9BQJ4 181 aa21.86■■□□□ 1.09
CIRBP-245ENST00000621399 USP26Q9BXU7 913 aa21.86■■□□□ 1.09
CIRBP-245ENST00000621399 TANGO6Q9C0B7 1094 aa21.86■■□□□ 1.09
CIRBP-245ENST00000621399 LOC285556D6RIA3 1793 aa21.85■■□□□ 1.09
CIRBP-245ENST00000621399 PTPRFP10586 1907 aa21.85■■□□□ 1.09
CIRBP-245ENST00000621399 WDR46O15213 610 aaKnown RBP21.85■■□□□ 1.09
CIRBP-245ENST00000621399 NDUFB10O96000 172 aa21.85■■□□□ 1.09
CIRBP-245ENST00000621399 RCSD1Q6JBY9 416 aa21.85■■□□□ 1.09
CIRBP-245ENST00000621399 P2RX7Q99572 595 aaKnown RBP21.85■■□□□ 1.09
CIRBP-245ENST00000621399 TNKSO95271 1327 aa21.84■■□□□ 1.09
CIRBP-245ENST00000621399 GPR25O00155 361 aa21.84■■□□□ 1.09
CIRBP-245ENST00000621399 MCCP23508 829 aa21.84■■□□□ 1.09
CIRBP-245ENST00000621399 KRT32Q14532 448 aa21.84■■□□□ 1.09
CIRBP-245ENST00000621399 TSGA10IPQ3SY00 556 aa21.84■■□□□ 1.09
CIRBP-245ENST00000621399 FAM83BQ5T0W9 1011 aa21.84■■□□□ 1.09
CIRBP-245ENST00000621399 SLFN13Q68D06 897 aa21.84■■□□□ 1.09
CIRBP-245ENST00000621399 CHST3Q7LGC8 479 aa21.84■■□□□ 1.09
CIRBP-245ENST00000621399 MB21D2Q8IYB1 491 aaPredicted RBP21.84■■□□□ 1.09
CIRBP-245ENST00000621399 CPA4Q9UI42 421 aa21.84■■□□□ 1.09
CIRBP-245ENST00000621399 IFIT3O14879 490 aaKnown RBP21.83■■□□□ 1.09
CIRBP-245ENST00000621399 SART3Q15020 963 aaKnown RBP21.83■■□□□ 1.09
CIRBP-245ENST00000621399 ENAHQ8N8S7 591 aaPredicted RBP21.83■■□□□ 1.09
CIRBP-245ENST00000621399 KCNB2Q92953 911 aa21.83■■□□□ 1.09
CIRBP-245ENST00000621399 CHMP4CQ96CF2 233 aa21.83■■□□□ 1.09
CIRBP-245ENST00000621399 NEK1Q96PY6 1258 aa21.83■■□□□ 1.09
CIRBP-245ENST00000621399 NUP88Q99567 741 aaPredicted RBP21.83■■□□□ 1.09
CIRBP-245ENST00000621399 MTMR7Q9Y216 660 aa21.83■■□□□ 1.09
CIRBP-245ENST00000621399 ERICH2A1L162 156 aa21.82■■□□□ 1.08
CIRBP-245ENST00000621399 MCM5P33992 734 aa21.82■■□□□ 1.08
CIRBP-245ENST00000621399 HERVK_113P62684 666 aa21.82■■□□□ 1.08
CIRBP-245ENST00000621399 COG2Q14746 738 aa21.82■■□□□ 1.08
CIRBP-245ENST00000621399 NOM1Q5C9Z4 860 aaKnown RBP21.82■■□□□ 1.08
CIRBP-245ENST00000621399 C17orf99Q6UX52 265 aa21.82■■□□□ 1.08
CIRBP-245ENST00000621399 ANKS1AQ92625 1134 aa21.82■■□□□ 1.08
CIRBP-245ENST00000621399 GMCL1Q96IK5 515 aa21.82■■□□□ 1.08
CIRBP-245ENST00000621399 KAT14Q9H8E8 782 aa21.82■■□□□ 1.08
CIRBP-245ENST00000621399 ISY1Q9ULR0 285 aaKnown RBP21.82■■□□□ 1.08
CIRBP-245ENST00000621399 SNX14Q9Y5W7 946 aa21.82■■□□□ 1.08
CIRBP-245ENST00000621399 ADGRA2Q96PE1 1338 aa21.81■■□□□ 1.08
CIRBP-245ENST00000621399 PRC1O43663 620 aa21.81■■□□□ 1.08
CIRBP-245ENST00000621399 FKTNO75072 461 aa21.81■■□□□ 1.08
CIRBP-245ENST00000621399 FLOT1O75955 427 aa21.81■■□□□ 1.08
CIRBP-245ENST00000621399 BMP3P12645 472 aa21.81■■□□□ 1.08
CIRBP-245ENST00000621399 SLC1A4P43007 532 aa21.81■■□□□ 1.08
CIRBP-245ENST00000621399 GCLCP48506 637 aaPredicted RBP21.81■■□□□ 1.08
CIRBP-245ENST00000621399 ANTXR2P58335 489 aa21.81■■□□□ 1.08
CIRBP-245ENST00000621399 ADCK5Q3MIX3 580 aa21.81■■□□□ 1.08
CIRBP-245ENST00000621399 C8orf34Q49A92 452 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms