RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 INPP5BP32019 993 aa21.64■■□□□ 1.05
SSBP4-212ENST00000601919 JAG1P78504 1218 aa21.64■■□□□ 1.05
SSBP4-212ENST00000601919 MAP3K9P80192 1104 aa21.64■■□□□ 1.05
SSBP4-212ENST00000601919 ST3GAL1Q11201 340 aa21.64■■□□□ 1.05
SSBP4-212ENST00000601919 GRM4Q14833 912 aa21.64■■□□□ 1.05
SSBP4-212ENST00000601919 SHROOM1Q2M3G4 852 aaPredicted RBP21.64■■□□□ 1.05
SSBP4-212ENST00000601919 ARMC9Q7Z3E5 817 aa21.64■■□□□ 1.05
SSBP4-212ENST00000601919 CLEC10AQ8IUN9 316 aa21.64■■□□□ 1.05
SSBP4-212ENST00000601919 LRRC47Q8N1G4 583 aaKnown RBP21.64■■□□□ 1.05
SSBP4-212ENST00000601919 LZTS2Q9BRK4 669 aa21.64■■□□□ 1.05
SSBP4-212ENST00000601919 AS3MTQ9HBK9 375 aa21.64■■□□□ 1.05
SSBP4-212ENST00000601919 USP17L5A8MUK1 530 aa21.63■■□□□ 1.05
SSBP4-212ENST00000601919 PARP1P09874 1014 aaKnown RBP21.63■■□□□ 1.05
SSBP4-212ENST00000601919 TTLL12Q14166 644 aaPredicted RBP21.63■■□□□ 1.05
SSBP4-212ENST00000601919 GMCL1P1Q8NEA9 526 aa21.63■■□□□ 1.05
SSBP4-212ENST00000601919 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.63■■□□□ 1.05
SSBP4-212ENST00000601919 GPBP1L1Q9HC44 474 aaPredicted RBP21.63■■□□□ 1.05
SSBP4-212ENST00000601919 GOPCQ9HD26 462 aa21.63■■□□□ 1.05
SSBP4-212ENST00000601919 CSADQ9Y600 493 aa21.63■■□□□ 1.05
SSBP4-212ENST00000601919 PDIA4P13667 645 aaKnown RBP21.62■■□□□ 1.05
SSBP4-212ENST00000601919 CDC27P30260 824 aa21.62■■□□□ 1.05
SSBP4-212ENST00000601919 ADD1P35611 737 aaKnown RBP21.62■■□□□ 1.05
SSBP4-212ENST00000601919 ASPRV1Q53RT3 343 aa21.62■■□□□ 1.05
SSBP4-212ENST00000601919 CHADLQ6NUI6 762 aa21.62■■□□□ 1.05
SSBP4-212ENST00000601919 TRIM22Q8IYM9 498 aa21.62■■□□□ 1.05
SSBP4-212ENST00000601919 NSUN7Q8NE18 718 aaKnown RBP21.62■■□□□ 1.05
SSBP4-212ENST00000601919 DCAF4Q8WV16 495 aa21.62■■□□□ 1.05
SSBP4-212ENST00000601919 FAM217BQ9NTX9 383 aaPredicted RBP21.62■■□□□ 1.05
SSBP4-212ENST00000601919 IFNAR1P17181 557 aa21.61■■□□□ 1.05
SSBP4-212ENST00000601919 PDCP20941 246 aa21.61■■□□□ 1.05
SSBP4-212ENST00000601919 PRKG1Q13976 671 aa21.61■■□□□ 1.05
SSBP4-212ENST00000601919 MAP3K11Q16584 847 aa21.61■■□□□ 1.05
SSBP4-212ENST00000601919 SIAH1Q8IUQ4 282 aa21.61■■□□□ 1.05
SSBP4-212ENST00000601919 FAM184AQ8NB25 1140 aa21.61■■□□□ 1.05
SSBP4-212ENST00000601919 SMARCC2Q8TAQ2 1214 aa21.61■■□□□ 1.05
SSBP4-212ENST00000601919 FEZ1Q99689 392 aa21.61■■□□□ 1.05
SSBP4-212ENST00000601919 CIZ1Q9ULV3 898 aaPredicted RBP21.61■■□□□ 1.05
SSBP4-212ENST00000601919 MTMR7Q9Y216 660 aa21.61■■□□□ 1.05
SSBP4-212ENST00000601919 TMX2Q9Y320 296 aa21.61■■□□□ 1.05
SSBP4-212ENST00000601919 PTPDC1A2A3K4 754 aa21.6■■□□□ 1.05
SSBP4-212ENST00000601919 UNCXA6NJT0 531 aa21.6■■□□□ 1.05
SSBP4-212ENST00000601919 PDHBP11177 359 aa21.6■■□□□ 1.05
SSBP4-212ENST00000601919 PTPRAP18433 802 aa21.6■■□□□ 1.05
SSBP4-212ENST00000601919 GJB2P29033 226 aa21.6■■□□□ 1.05
SSBP4-212ENST00000601919 FKBP1BP68106 108 aa21.6■■□□□ 1.05
SSBP4-212ENST00000601919 AKAP17AQ02040 695 aaKnown RBP21.6■■□□□ 1.05
SSBP4-212ENST00000601919 SSRP1Q08945 709 aaKnown RBP21.6■■□□□ 1.05
SSBP4-212ENST00000601919 GPATCH4Q5T3I0 446 aaKnown RBP21.6■■□□□ 1.05
SSBP4-212ENST00000601919 SLFN13Q68D06 897 aa21.6■■□□□ 1.05
SSBP4-212ENST00000601919 DLK2Q6UY11 383 aa21.6■■□□□ 1.05
SSBP4-212ENST00000601919 TMTC3Q6ZXV5 915 aa21.6■■□□□ 1.05
SSBP4-212ENST00000601919 ANKRD13AQ8IZ07 590 aa21.6■■□□□ 1.05
SSBP4-212ENST00000601919 ZKSCAN4Q969J2 545 aaPredicted RBP21.6■■□□□ 1.05
SSBP4-212ENST00000601919 WDR18Q9BV38 432 aa21.6■■□□□ 1.05
SSBP4-212ENST00000601919 RBM27Q9P2N5 1060 aaKnown RBP21.6■■□□□ 1.05
SSBP4-212ENST00000601919 PALM3A6NDB9 673 aaPredicted RBP21.59■■□□□ 1.05
SSBP4-212ENST00000601919 F5H6K3 240 aa21.59■■□□□ 1.05
SSBP4-212ENST00000601919 RAD21O60216 631 aa21.59■■□□□ 1.05
SSBP4-212ENST00000601919 CTDNEP1O95476 244 aa21.59■■□□□ 1.05
SSBP4-212ENST00000601919 SNHG28P0DPA3 235 aa21.59■■□□□ 1.05
SSBP4-212ENST00000601919 SMARCA1P28370 1054 aa21.59■■□□□ 1.05
SSBP4-212ENST00000601919 KLRC3Q07444 240 aa21.59■■□□□ 1.05
SSBP4-212ENST00000601919 WASF1Q92558 559 aa21.59■■□□□ 1.05
SSBP4-212ENST00000601919 MAD2L2Q9UI95 211 aa21.59■■□□□ 1.05
SSBP4-212ENST00000601919 OTOFQ9HC10 1997 aa21.59■■□□□ 1.05
SSBP4-212ENST00000601919 MYH6P13533 1939 aa21.59■■□□□ 1.05
SSBP4-212ENST00000601919 PAPPA2Q9BXP8 1791 aa21.59■■□□□ 1.05
SSBP4-212ENST00000601919 STK36Q9NRP7 1315 aa21.58■■□□□ 1.05
SSBP4-212ENST00000601919 SLC1A4P43007 532 aa21.58■■□□□ 1.05
SSBP4-212ENST00000601919 VGLL4Q14135 290 aa21.58■■□□□ 1.05
SSBP4-212ENST00000601919 NTRK3Q16288 839 aa21.58■■□□□ 1.05
SSBP4-212ENST00000601919 CCDC96Q2M329 555 aa21.58■■□□□ 1.05
SSBP4-212ENST00000601919 GMCL1Q96IK5 515 aa21.58■■□□□ 1.05
SSBP4-212ENST00000601919 RNF26Q9BY78 433 aaPredicted RBP21.58■■□□□ 1.05
SSBP4-212ENST00000601919 VCPKMTQ9H867 229 aa21.58■■□□□ 1.05
SSBP4-212ENST00000601919 ORC3Q9UBD5 711 aaPredicted RBP21.58■■□□□ 1.05
SSBP4-212ENST00000601919 FZD1Q9UP38 647 aa21.58■■□□□ 1.05
SSBP4-212ENST00000601919 A0A1W2PRG0 241 aa21.57■■□□□ 1.04
SSBP4-212ENST00000601919 USP17L10C9JJH3 530 aa21.57■■□□□ 1.04
SSBP4-212ENST00000601919 TRAF5O00463 557 aa21.57■■□□□ 1.04
SSBP4-212ENST00000601919 JAK2O60674 1132 aa21.57■■□□□ 1.04
SSBP4-212ENST00000601919 FMNL1O95466 1100 aaPredicted RBP21.57■■□□□ 1.04
SSBP4-212ENST00000601919 ECE1P42892 770 aa21.57■■□□□ 1.04
SSBP4-212ENST00000601919 USP14P54578 494 aa21.57■■□□□ 1.04
SSBP4-212ENST00000601919 ZNF543Q08ER8 600 aa21.57■■□□□ 1.04
SSBP4-212ENST00000601919 USP17L2Q6R6M4 530 aa21.57■■□□□ 1.04
SSBP4-212ENST00000601919 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.57■■□□□ 1.04
SSBP4-212ENST00000601919 ZNF280CQ8ND82 737 aa21.57■■□□□ 1.04
SSBP4-212ENST00000601919 ACER1Q8TDN7 264 aa21.57■■□□□ 1.04
SSBP4-212ENST00000601919 LPAR1Q92633 364 aa21.57■■□□□ 1.04
SSBP4-212ENST00000601919 DDX11Q96FC9 970 aa21.57■■□□□ 1.04
SSBP4-212ENST00000601919 KIAA1683Q9H0B3 1180 aa21.57■■□□□ 1.04
SSBP4-212ENST00000601919 ZNF408Q9H9D4 720 aa21.57■■□□□ 1.04
SSBP4-212ENST00000601919 TRPM7Q96QT4 1865 aa21.57■■□□□ 1.04
SSBP4-212ENST00000601919 KLRF2D3W0D1 207 aa21.56■■□□□ 1.04
SSBP4-212ENST00000601919 NDUFB10O96000 172 aa21.56■■□□□ 1.04
SSBP4-212ENST00000601919 C2orf69Q8N8R5 385 aa21.56■■□□□ 1.04
SSBP4-212ENST00000601919 SLC26A6Q9BXS9 759 aa21.56■■□□□ 1.04
SSBP4-212ENST00000601919 CHMP5Q9NZZ3 219 aa21.56■■□□□ 1.04
SSBP4-212ENST00000601919 ISY1Q9ULR0 285 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms