RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 MB21D1Q8N884 522 aa14.89□□□□□ -0.03
CDK5RAP3-216ENST00000579853 TRPV1Q8NER1 839 aa14.89□□□□□ -0.03
CDK5RAP3-216ENST00000579853 BADQ92934 168 aa14.89□□□□□ -0.03
CDK5RAP3-216ENST00000579853 RPAP3Q9H6T3 665 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-216ENST00000579853 FPGT-TNNI3KV9GXZ4 949 aa14.89□□□□□ -0.03
CDK5RAP3-216ENST00000579853 MYO9BQ13459 2157 aa14.89□□□□□ -0.03
CDK5RAP3-216ENST00000579853 ZNF236Q9UL36 1845 aa14.89□□□□□ -0.03
CDK5RAP3-216ENST00000579853 PNMA6EA0A0J9YXQ4 647 aa14.88□□□□□ -0.03
CDK5RAP3-216ENST00000579853 RARSP54136 660 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-216ENST00000579853 OS9Q13438 667 aaPredicted RBP14.88□□□□□ -0.03
CDK5RAP3-216ENST00000579853 COG2Q14746 738 aa14.88□□□□□ -0.03
CDK5RAP3-216ENST00000579853 ABRAQ8N0Z2 381 aa14.88□□□□□ -0.03
CDK5RAP3-216ENST00000579853 MYLIPQ8WY64 445 aa14.88□□□□□ -0.03
CDK5RAP3-216ENST00000579853 PDLIM7Q9NR12 457 aa14.88□□□□□ -0.03
CDK5RAP3-216ENST00000579853 TACC3Q9Y6A5 838 aa14.88□□□□□ -0.03
CDK5RAP3-216ENST00000579853 ZAP70P43403 619 aa14.87□□□□□ -0.03
CDK5RAP3-216ENST00000579853 DYNLL1P63167 89 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-216ENST00000579853 TRIM60Q495X7 471 aa14.87□□□□□ -0.03
CDK5RAP3-216ENST00000579853 ACER1Q8TDN7 264 aa14.87□□□□□ -0.03
CDK5RAP3-216ENST00000579853 DBNDD2Q9BQY9 259 aa14.87□□□□□ -0.03
CDK5RAP3-216ENST00000579853 MOV10L1Q9BXT6 1211 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-216ENST00000579853 SPATC1LQ9H0A9 340 aa14.87□□□□□ -0.03
CDK5RAP3-216ENST00000579853 TTYH1Q9H313 450 aaPredicted RBP14.87□□□□□ -0.03
CDK5RAP3-216ENST00000579853 MROH8Q9H579 483 aa14.87□□□□□ -0.03
CDK5RAP3-216ENST00000579853 NRBP1Q9UHY1 535 aa14.87□□□□□ -0.03
CDK5RAP3-216ENST00000579853 MYO5AQ9Y4I1 1855 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-216ENST00000579853 ZNF316A6NFI3 1004 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP3-216ENST00000579853 IDH1O75874 414 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-216ENST00000579853 ADCYAP1R1P41586 468 aa14.86□□□□□ -0.03
CDK5RAP3-216ENST00000579853 LRRC41Q15345 812 aa14.86□□□□□ -0.03
CDK5RAP3-216ENST00000579853 ERCC3P19447 782 aa14.85□□□□□ -0.03
CDK5RAP3-216ENST00000579853 TLE2Q04725 743 aa14.85□□□□□ -0.03
CDK5RAP3-216ENST00000579853 MAP3K12Q12852 859 aa14.85□□□□□ -0.03
CDK5RAP3-216ENST00000579853 TJAP1Q5JTD0 557 aa14.85□□□□□ -0.03
CDK5RAP3-216ENST00000579853 MIGA1Q8NAN2 632 aa14.85□□□□□ -0.03
CDK5RAP3-216ENST00000579853 RNPC3Q96LT9 517 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-216ENST00000579853 TANGO6Q9C0B7 1094 aa14.85□□□□□ -0.03
CDK5RAP3-216ENST00000579853 PIH1D3Q9NQM4 214 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-216ENST00000579853 TRANK1O15050 2925 aa14.84□□□□□ -0.03
CDK5RAP3-216ENST00000579853 SMCHD1A6NHR9 2005 aa14.84□□□□□ -0.03
CDK5RAP3-216ENST00000579853 TRIM43BA6NCK2 446 aa14.84□□□□□ -0.03
CDK5RAP3-216ENST00000579853 CLTBP09497 229 aa14.84□□□□□ -0.03
CDK5RAP3-216ENST00000579853 RARBP10826 455 aa14.84□□□□□ -0.03
CDK5RAP3-216ENST00000579853 SHMT1P34896 483 aa14.84□□□□□ -0.03
CDK5RAP3-216ENST00000579853 POLA2Q14181 598 aa14.84□□□□□ -0.03
CDK5RAP3-216ENST00000579853 ANO1Q5XXA6 986 aa14.84□□□□□ -0.03
CDK5RAP3-216ENST00000579853 RNF180Q86T96 592 aa14.84□□□□□ -0.03
CDK5RAP3-216ENST00000579853 MAGEB6Q8N7X4 407 aa14.84□□□□□ -0.03
CDK5RAP3-216ENST00000579853 FERMT2Q96AC1 680 aa14.84□□□□□ -0.03
CDK5RAP3-216ENST00000579853 TRIM43Q96BQ3 446 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-216ENST00000579853 PHF24Q9UPV7 400 aa14.84□□□□□ -0.03
CDK5RAP3-216ENST00000579853 CHD7Q9P2D1 2997 aa14.83□□□□□ -0.03
CDK5RAP3-216ENST00000579853 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-216ENST00000579853 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-216ENST00000579853 COBLO75128 1261 aa14.83□□□□□ -0.04
CDK5RAP3-216ENST00000579853 SURF6O75683 361 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP3-216ENST00000579853 POLR3DP05423 398 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-216ENST00000579853 FCER1AP12319 257 aa14.83□□□□□ -0.04
CDK5RAP3-216ENST00000579853 RAG1P15918 1043 aa14.83□□□□□ -0.04
CDK5RAP3-216ENST00000579853 SEPT2Q15019 361 aa14.83□□□□□ -0.04
CDK5RAP3-216ENST00000579853 SH3RF1Q7Z6J0 888 aa14.83□□□□□ -0.04
CDK5RAP3-216ENST00000579853 SSH3Q8TE77 659 aa14.83□□□□□ -0.04
CDK5RAP3-216ENST00000579853 MAML3Q96JK9 1138 aa14.83□□□□□ -0.04
CDK5RAP3-216ENST00000579853 SH2D4AQ9H788 454 aa14.83□□□□□ -0.04
CDK5RAP3-216ENST00000579853 XPNPEP3Q9NQH7 507 aa14.83□□□□□ -0.04
CDK5RAP3-216ENST00000579853 MPHOSPH10O00566 681 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-216ENST00000579853 KIAA0355O15063 1070 aa14.82□□□□□ -0.04
CDK5RAP3-216ENST00000579853 SLC25A27O95847 323 aa14.82□□□□□ -0.04
CDK5RAP3-216ENST00000579853 ATXN8OSP0DMR3 200 aa14.82□□□□□ -0.04
CDK5RAP3-216ENST00000579853 TRIM27P14373 513 aa14.82□□□□□ -0.04
CDK5RAP3-216ENST00000579853 GUCY1A2P33402 732 aa14.82□□□□□ -0.04
CDK5RAP3-216ENST00000579853 PLCD1P51178 756 aa14.82□□□□□ -0.04
CDK5RAP3-216ENST00000579853 FPGSQ05932 587 aa14.82□□□□□ -0.04
CDK5RAP3-216ENST00000579853 PLS1Q14651 629 aa14.82□□□□□ -0.04
CDK5RAP3-216ENST00000579853 FAM47AQ5JRC9 791 aa14.82□□□□□ -0.04
CDK5RAP3-216ENST00000579853 NCAPG2Q86XI2 1143 aa14.82□□□□□ -0.04
CDK5RAP3-216ENST00000579853 TOX2Q96NM4 488 aa14.82□□□□□ -0.04
CDK5RAP3-216ENST00000579853 DBNLQ9UJU6 430 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-216ENST00000579853 TNFRSF10AO00220 468 aa14.81□□□□□ -0.04
CDK5RAP3-216ENST00000579853 ATP8B2P98198 1209 aa14.81□□□□□ -0.04
CDK5RAP3-216ENST00000579853 GABPAQ06546 454 aa14.81□□□□□ -0.04
CDK5RAP3-216ENST00000579853 TMEM179Q6ZVK1 233 aa14.81□□□□□ -0.04
CDK5RAP3-216ENST00000579853 CRNKL1Q9BZJ0 848 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-216ENST00000579853 NOP58Q9Y2X3 529 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-216ENST00000579853 A0A0G2JMZ2 1700 aa14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 ZNFX1Q9P2E3 1918 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 A0A1W2PRG0 241 aa14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 DCDC2CA8MYV0 355 aa14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 FLOT1O75955 427 aa14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 DNAJB2P25686 324 aa14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 PRAMEF19Q5SWL8 479 aa14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 CCDC174Q6PII3 467 aa14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 NUP133Q8WUM0 1156 aa14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 FRAT1Q92837 279 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 TSEN34Q9BSV6 310 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 ARHGEF10LQ9HCE6 1279 aa14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 TMEM39AQ9NV64 488 aa14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 MCM9Q9NXL9 1143 aa14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 SWAP70Q9UH65 585 aa14.8□□□□□ -0.04
CDK5RAP3-216ENST00000579853 DIS3Q9Y2L1 958 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms