RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-208ENST00000570688 TSPY8P0CW00 308 aa13.19□□□□□ -0.3
ABR-208ENST00000570688 HOXA7P31268 230 aaPredicted RBP13.19□□□□□ -0.3
ABR-208ENST00000570688 HSPA4P34932 840 aa13.19□□□□□ -0.3
ABR-208ENST00000570688 USP17L2Q6R6M4 530 aa13.19□□□□□ -0.3
ABR-208ENST00000570688 CHST3Q7LGC8 479 aa13.19□□□□□ -0.3
ABR-208ENST00000570688 CHMP4CQ96CF2 233 aa13.19□□□□□ -0.3
ABR-208ENST00000570688 ASCC2Q9H1I8 757 aaPredicted RBP13.19□□□□□ -0.3
ABR-208ENST00000570688 TXNRD2Q9NNW7 524 aa13.19□□□□□ -0.3
ABR-208ENST00000570688 TCP11L1Q9NUJ3 509 aa13.19□□□□□ -0.3
ABR-208ENST00000570688 SAGE1Q9NXZ1 904 aa13.19□□□□□ -0.3
ABR-208ENST00000570688 CNMDO75829 334 aa13.18□□□□□ -0.3
ABR-208ENST00000570688 NDUFB10O96000 172 aa13.18□□□□□ -0.3
ABR-208ENST00000570688 SLC3A2P08195 630 aaKnown RBP13.18□□□□□ -0.3
ABR-208ENST00000570688 BCRP11274 1271 aa13.18□□□□□ -0.3
ABR-208ENST00000570688 CPA1P15085 419 aa13.18□□□□□ -0.3
ABR-208ENST00000570688 LBX1P52954 281 aa13.18□□□□□ -0.3
ABR-208ENST00000570688 ATP2B2Q01814 1243 aa13.18□□□□□ -0.3
ABR-208ENST00000570688 TAF1CQ15572 869 aaPredicted RBP13.18□□□□□ -0.3
ABR-208ENST00000570688 TSGA10IPQ3SY00 556 aa13.18□□□□□ -0.3
ABR-208ENST00000570688 C17orf99Q6UX52 265 aa13.18□□□□□ -0.3
ABR-208ENST00000570688 KIAA1211Q6ZU35 1233 aa13.18□□□□□ -0.3
ABR-208ENST00000570688 REM2Q8IYK8 340 aaPredicted RBP13.18□□□□□ -0.3
ABR-208ENST00000570688 ENAHQ8N8S7 591 aaPredicted RBP13.18□□□□□ -0.3
ABR-208ENST00000570688 P2RX7Q99572 595 aaKnown RBP13.18□□□□□ -0.3
ABR-208ENST00000570688 TMEM47Q9BQJ4 181 aa13.18□□□□□ -0.3
ABR-208ENST00000570688 RPAP3Q9H6T3 665 aaPredicted RBP13.18□□□□□ -0.3
ABR-208ENST00000570688 TOMM22Q9NS69 142 aa13.18□□□□□ -0.3
ABR-208ENST00000570688 FBXO28Q9NVF7 368 aa13.18□□□□□ -0.3
ABR-208ENST00000570688 SNX14Q9Y5W7 946 aa13.18□□□□□ -0.3
ABR-208ENST00000570688 F5H6K3 240 aa13.17□□□□□ -0.3
ABR-208ENST00000570688 TTLL1O95922 423 aa13.17□□□□□ -0.3
ABR-208ENST00000570688 PCP11498 1178 aaKnown RBP13.17□□□□□ -0.3
ABR-208ENST00000570688 KLRC3Q07444 240 aa13.17□□□□□ -0.3
ABR-208ENST00000570688 CATSPERGQ6ZRH7 1159 aa13.17□□□□□ -0.3
ABR-208ENST00000570688 FASTKD5Q7L8L6 764 aaKnown RBP13.17□□□□□ -0.3
ABR-208ENST00000570688 ANKS1AQ92625 1134 aa13.17□□□□□ -0.3
ABR-208ENST00000570688 FEZ1Q99689 392 aa13.17□□□□□ -0.3
ABR-208ENST00000570688 RNF41Q9H4P4 317 aaPredicted RBP13.17□□□□□ -0.3
ABR-208ENST00000570688 ZCCHC17Q9NP64 241 aaKnown RBP13.17□□□□□ -0.3
ABR-208ENST00000570688 CPA4Q9UI42 421 aa13.17□□□□□ -0.3
ABR-208ENST00000570688 SLC45A1Q9Y2W3 748 aa13.17□□□□□ -0.3
ABR-208ENST00000570688 MGAMO43451 1857 aa13.16□□□□□ -0.3
ABR-208ENST00000570688 PLXNB2O15031 1838 aa13.16□□□□□ -0.3
ABR-208ENST00000570688 SPDYE16A6NNV3 312 aaPredicted RBP13.16□□□□□ -0.3
ABR-208ENST00000570688 GPR25O00155 361 aa13.16□□□□□ -0.3
ABR-208ENST00000570688 TLR2O60603 784 aa13.16□□□□□ -0.3
ABR-208ENST00000570688 SLC35G1Q2M3R5 365 aa13.16□□□□□ -0.3
ABR-208ENST00000570688 FAM83BQ5T0W9 1011 aa13.16□□□□□ -0.3
ABR-208ENST00000570688 IGDCC4Q8TDY8 1250 aa13.16□□□□□ -0.3
ABR-208ENST00000570688 ZNF296Q8WUU4 475 aaPredicted RBP13.16□□□□□ -0.3
ABR-208ENST00000570688 ESR2Q92731 530 aa13.16□□□□□ -0.3
ABR-208ENST00000570688 TCEANC2Q96MN5 208 aa13.16□□□□□ -0.3
ABR-208ENST00000570688 ARHGAP39Q9C0H5 1083 aa13.16□□□□□ -0.3
ABR-208ENST00000570688 ZNF287Q9HBT7 754 aa13.16□□□□□ -0.3
ABR-208ENST00000570688 ARHGEF10LQ9HCE6 1279 aa13.16□□□□□ -0.3
ABR-208ENST00000570688 RBPJLQ9UBG7 517 aa13.16□□□□□ -0.3
ABR-208ENST00000570688 TNKSO95271 1327 aa13.15□□□□□ -0.3
ABR-208ENST00000570688 USP14P54578 494 aa13.15□□□□□ -0.3
ABR-208ENST00000570688 EXOSC10Q01780 885 aaKnown RBP13.15□□□□□ -0.3
ABR-208ENST00000570688 Q3C1V9 767 aa13.15□□□□□ -0.3
ABR-208ENST00000570688 CASC1Q6TDU7 716 aa13.15□□□□□ -0.3
ABR-208ENST00000570688 GMCL1P1Q8NEA9 526 aa13.15□□□□□ -0.3
ABR-208ENST00000570688 REPS2Q8NFH8 660 aa13.15□□□□□ -0.3
ABR-208ENST00000570688 ZSCAN10Q96SZ4 725 aaPredicted RBP13.15□□□□□ -0.3
ABR-208ENST00000570688 LRRC2Q9BYS8 371 aa13.15□□□□□ -0.3
ABR-208ENST00000570688 TMOD4Q9NZQ9 345 aa13.15□□□□□ -0.3
ABR-208ENST00000570688 BTBD7Q9P203 1132 aa13.15□□□□□ -0.3
ABR-208ENST00000570688 STX8Q9UNK0 236 aa13.15□□□□□ -0.3
ABR-208ENST00000570688 HTTP42858 3142 aa13.15□□□□□ -0.3
ABR-208ENST00000570688 ALDH1A1P00352 501 aa13.14□□□□□ -0.31
ABR-208ENST00000570688 SNHG28P0DPA3 235 aa13.14□□□□□ -0.31
ABR-208ENST00000570688 MCCP23508 829 aa13.14□□□□□ -0.31
ABR-208ENST00000570688 CTCFP49711 727 aaPredicted RBP13.14□□□□□ -0.31
ABR-208ENST00000570688 HERVK_113P62684 666 aa13.14□□□□□ -0.31
ABR-208ENST00000570688 TTBK2Q6IQ55 1244 aa13.14□□□□□ -0.31
ABR-208ENST00000570688 NCOA7Q8NI08 942 aa13.14□□□□□ -0.31
ABR-208ENST00000570688 ATG4CQ96DT6 458 aa13.14□□□□□ -0.31
ABR-208ENST00000570688 KRT23Q9C075 422 aa13.14□□□□□ -0.31
ABR-208ENST00000570688 CPVLQ9H3G5 476 aa13.14□□□□□ -0.31
ABR-208ENST00000570688 CNNM2Q9H8M5 875 aa13.14□□□□□ -0.31
ABR-208ENST00000570688 ADAMTS5Q9UNA0 930 aa13.14□□□□□ -0.31
ABR-208ENST00000570688 BAZ2BQ9UIF8 2168 aaKnown RBP13.14□□□□□ -0.31
ABR-208ENST00000570688 USP17L15C9J2P7 530 aa13.13□□□□□ -0.31
ABR-208ENST00000570688 USP17L13C9JLJ4 530 aa13.13□□□□□ -0.31
ABR-208ENST00000570688 USP17L11C9JVI0 530 aa13.13□□□□□ -0.31
ABR-208ENST00000570688 USP17L18D6R9N7 530 aa13.13□□□□□ -0.31
ABR-208ENST00000570688 USP17L22D6RA61 530 aa13.13□□□□□ -0.31
ABR-208ENST00000570688 USP17L17D6RBQ6 530 aa13.13□□□□□ -0.31
ABR-208ENST00000570688 USP17L19D6RCP7 530 aa13.13□□□□□ -0.31
ABR-208ENST00000570688 USP17L20D6RJB6 530 aa13.13□□□□□ -0.31
ABR-208ENST00000570688 WDR46O15213 610 aaKnown RBP13.13□□□□□ -0.31
ABR-208ENST00000570688 PRC1O43663 620 aa13.13□□□□□ -0.31
ABR-208ENST00000570688 ECM2O94769 699 aaPredicted RBP13.13□□□□□ -0.31
ABR-208ENST00000570688 REC8O95072 547 aa13.13□□□□□ -0.31
ABR-208ENST00000570688 PDHBP11177 359 aa13.13□□□□□ -0.31
ABR-208ENST00000570688 TOP1P11387 765 aaKnown RBP13.13□□□□□ -0.31
ABR-208ENST00000570688 TAL1P17542 331 aaPredicted RBP13.13□□□□□ -0.31
ABR-208ENST00000570688 DSG3P32926 999 aa13.13□□□□□ -0.31
ABR-208ENST00000570688 USP17L24Q0WX57 530 aa13.13□□□□□ -0.31
ABR-208ENST00000570688 NOM1Q5C9Z4 860 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms