RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-214ENST00000567572 RIMBP2O15034 1052 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 BMP15O95972 392 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 BTDP43251 543 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 FANCCQ00597 558 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 NT5DC1Q5TFE4 455 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 METTL16Q86W50 562 aaKnown RBP20.29■□□□□ 0.84
CMTM3-214ENST00000567572 IQCA1Q86XH1 822 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 CCDC34Q96HJ3 373 aa20.29■□□□□ 0.84
CMTM3-214ENST00000567572 ZC3H12CQ9C0D7 883 aaKnown RBP20.29■□□□□ 0.84
CMTM3-214ENST00000567572 RBM28Q9NW13 759 aaKnown RBP20.29■□□□□ 0.84
CMTM3-214ENST00000567572 FBXO2Q9UK22 296 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-214ENST00000567572 BTBD18B2RXH4 712 aa20.28■□□□□ 0.84
CMTM3-214ENST00000567572 PDE4BQ07343 736 aa20.28■□□□□ 0.84
CMTM3-214ENST00000567572 ARID5BQ14865 1188 aa20.28■□□□□ 0.84
CMTM3-214ENST00000567572 CT47A1Q5JQC4 288 aaPredicted RBP20.28■□□□□ 0.84
CMTM3-214ENST00000567572 SLF2Q8IX21 1173 aa20.28■□□□□ 0.84
CMTM3-214ENST00000567572 H0YIN7 160 aa20.27■□□□□ 0.84
CMTM3-214ENST00000567572 GTF2IP78347 998 aa20.27■□□□□ 0.84
CMTM3-214ENST00000567572 TMC6Q7Z403 805 aa20.27■□□□□ 0.84
CMTM3-214ENST00000567572 FBXW7Q969H0 707 aa20.27■□□□□ 0.84
CMTM3-214ENST00000567572 ZNF622Q969S3 477 aaKnown RBP eCLIP20.27■□□□□ 0.84
CMTM3-214ENST00000567572 SUGT1Q9Y2Z0 365 aa20.27■□□□□ 0.84
CMTM3-214ENST00000567572 SRPRBQ9Y5M8 271 aaKnown RBP20.27■□□□□ 0.84
CMTM3-214ENST00000567572 TOB1P50616 345 aaPredicted RBP20.27■□□□□ 0.84
CMTM3-214ENST00000567572 TMX4Q9H1E5 349 aaPredicted RBP20.27■□□□□ 0.84
CMTM3-214ENST00000567572 HSD3B7Q9H2F3 369 aa20.27■□□□□ 0.84
CMTM3-214ENST00000567572 PLCG2P16885 1265 aa20.26■□□□□ 0.83
CMTM3-214ENST00000567572 MDM2Q00987 491 aaPredicted RBP20.26■□□□□ 0.83
CMTM3-214ENST00000567572 AKAP17AQ02040 695 aaKnown RBP20.26■□□□□ 0.83
CMTM3-214ENST00000567572 PNOCQ13519 176 aa20.26■□□□□ 0.83
CMTM3-214ENST00000567572 LONRF3Q496Y0 759 aa20.26■□□□□ 0.83
CMTM3-214ENST00000567572 IFIT1BQ5T764 474 aaKnown RBP20.26■□□□□ 0.83
CMTM3-214ENST00000567572 PDCL2Q8N4E4 241 aa20.26■□□□□ 0.83
CMTM3-214ENST00000567572 MLKLQ8NB16 471 aa20.26■□□□□ 0.83
CMTM3-214ENST00000567572 TGFBRAP1Q8WUH2 860 aa20.26■□□□□ 0.83
CMTM3-214ENST00000567572 CLIC6Q96NY7 704 aa20.26■□□□□ 0.83
CMTM3-214ENST00000567572 FOCADQ5VW36 1801 aa20.26■□□□□ 0.83
CMTM3-214ENST00000567572 SLX4Q8IY92 1834 aa20.26■□□□□ 0.83
CMTM3-214ENST00000567572 DDAH1O94760 285 aa20.25■□□□□ 0.83
CMTM3-214ENST00000567572 GUCY1A2P33402 732 aa20.25■□□□□ 0.83
CMTM3-214ENST00000567572 RHBDL3P58872 404 aa20.25■□□□□ 0.83
CMTM3-214ENST00000567572 KIF18AQ8NI77 898 aa20.25■□□□□ 0.83
CMTM3-214ENST00000567572 FBXO41Q8TF61 875 aa20.25■□□□□ 0.83
CMTM3-214ENST00000567572 PRPF3O43395 683 aaKnown RBP20.25■□□□□ 0.83
CMTM3-214ENST00000567572 POSTNQ15063 836 aa20.25■□□□□ 0.83
CMTM3-214ENST00000567572 ARMCX5Q6P1M9 558 aa20.25■□□□□ 0.83
CMTM3-214ENST00000567572 EYA3Q99504 573 aa20.25■□□□□ 0.83
CMTM3-214ENST00000567572 PCDHA5Q9Y5H7 936 aa20.25■□□□□ 0.83
CMTM3-214ENST00000567572 LMOD1P29536 600 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-214ENST00000567572 NCBP1Q09161 790 aaKnown RBP20.24■□□□□ 0.83
CMTM3-214ENST00000567572 CATIPQ7Z7H3 387 aa20.24■□□□□ 0.83
CMTM3-214ENST00000567572 FCHSD1Q86WN1 690 aa20.24■□□□□ 0.83
CMTM3-214ENST00000567572 AMOTL1Q8IY63 956 aa20.24■□□□□ 0.83
CMTM3-214ENST00000567572 CERS5Q8N5B7 392 aa20.24■□□□□ 0.83
CMTM3-214ENST00000567572 NUP133Q8WUM0 1156 aa20.24■□□□□ 0.83
CMTM3-214ENST00000567572 TSC1Q92574 1164 aa20.24■□□□□ 0.83
CMTM3-214ENST00000567572 USP27XA6NNY8 438 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 UBE2Q2LH0YL09 131 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 UBASH3AP57075 661 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 TROAPQ12815 778 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 FAM47AQ5JRC9 791 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 MAPKAPK5Q8IW41 473 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 TEX11Q8IYF3 940 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 KCNJ14Q9UNX9 436 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 DAGLAQ9Y4D2 1042 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 FLT1P17948 1338 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 NMT2O60551 498 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 SARSP49591 514 aaKnown RBP20.23■□□□□ 0.83
CMTM3-214ENST00000567572 DOK7Q18PE1 504 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 SLC4A8Q2Y0W8 1093 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 VSTM4Q8IW00 320 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 BRMS1Q9HCU9 246 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 SNED1Q8TER0 1413 aa20.23■□□□□ 0.83
CMTM3-214ENST00000567572 TSPY2A6NKD2 308 aa20.22■□□□□ 0.83
CMTM3-214ENST00000567572 SERPINC1P01008 464 aa20.22■□□□□ 0.83
CMTM3-214ENST00000567572 CHRNA5P30532 468 aa20.22■□□□□ 0.83
CMTM3-214ENST00000567572 FUT2Q10981 343 aa20.22■□□□□ 0.83
CMTM3-214ENST00000567572 SPATA20Q8TB22 786 aa20.22■□□□□ 0.83
CMTM3-214ENST00000567572 DYNLL2Q96FJ2 89 aa20.22■□□□□ 0.83
CMTM3-214ENST00000567572 PHF20Q9BVI0 1012 aa20.22■□□□□ 0.83
CMTM3-214ENST00000567572 CGNQ9P2M7 1197 aaKnown RBP20.22■□□□□ 0.83
CMTM3-214ENST00000567572 TRIM75PA6NK02 468 aa20.21■□□□□ 0.83
CMTM3-214ENST00000567572 KRT2P35908 639 aa20.21■□□□□ 0.83
CMTM3-214ENST00000567572 BAG6P46379 1132 aa20.21■□□□□ 0.83
CMTM3-214ENST00000567572 E4F1Q66K89 784 aaPredicted RBP20.21■□□□□ 0.83
CMTM3-214ENST00000567572 RCSD1Q6JBY9 416 aa20.21■□□□□ 0.83
CMTM3-214ENST00000567572 ENOX1Q8TC92 643 aaKnown RBP20.21■□□□□ 0.83
CMTM3-214ENST00000567572 SMARCE1Q969G3 411 aa20.21■□□□□ 0.83
CMTM3-214ENST00000567572 CNKSR1Q969H4 720 aa20.21■□□□□ 0.83
CMTM3-214ENST00000567572 FERMT2Q96AC1 680 aa20.21■□□□□ 0.83
CMTM3-214ENST00000567572 ZNF646O15015 1829 aaPredicted RBP20.21■□□□□ 0.83
CMTM3-214ENST00000567572 C10orf71Q711Q0 1435 aa20.21■□□□□ 0.83
CMTM3-214ENST00000567572 PLCD1P51178 756 aa20.21■□□□□ 0.83
CMTM3-214ENST00000567572 MORC3Q14149 939 aa20.21■□□□□ 0.83
CMTM3-214ENST00000567572 FOXP4Q8IVH2 680 aaPredicted RBP20.21■□□□□ 0.83
CMTM3-214ENST00000567572 FEZ1Q99689 392 aa20.21■□□□□ 0.83
CMTM3-214ENST00000567572 SAP30BPQ9UHR5 308 aaKnown RBP20.21■□□□□ 0.83
CMTM3-214ENST00000567572 MAN1B1Q9UKM7 699 aa20.21■□□□□ 0.83
CMTM3-214ENST00000567572 ATP1A3P13637 1013 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms