RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 VCPKMTQ9H867 229 aa7.3□□□□□ -1.24
IDH3A-206ENST00000558535 EBF2Q9HAK2 575 aa7.3□□□□□ -1.24
IDH3A-206ENST00000558535 ATXN10Q9UBB4 475 aa7.3□□□□□ -1.24
IDH3A-206ENST00000558535 HDAC6Q9UBN7 1215 aa7.3□□□□□ -1.24
IDH3A-206ENST00000558535 CCNL1Q9UK58 526 aaPredicted RBP7.3□□□□□ -1.24
IDH3A-206ENST00000558535 CAPN7Q9Y6W3 813 aa7.3□□□□□ -1.24
IDH3A-206ENST00000558535 DOT1LQ8TEK3 1739 aa7.3□□□□□ -1.24
IDH3A-206ENST00000558535 SH3TC1Q8TE82 1336 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 WDR46O15213 610 aaKnown RBP7.29□□□□□ -1.24
IDH3A-206ENST00000558535 NPTXRO95502 500 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 MMEP08473 750 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 PLEKHO1Q53GL0 409 aaPredicted RBP7.29□□□□□ -1.24
IDH3A-206ENST00000558535 CMPK2Q5EBM0 449 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 NAA16Q6N069 864 aaPredicted RBP7.29□□□□□ -1.24
IDH3A-206ENST00000558535 PPP1R14CQ8TAE6 165 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 LRRC45Q96CN5 670 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 FAM163AQ96GL9 167 aaPredicted RBP7.29□□□□□ -1.24
IDH3A-206ENST00000558535 RAB21Q9UL25 225 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 IKBKGQ9Y6K9 419 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 CYTH3O43739 400 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 DNAJC8O75937 253 aaPredicted RBP7.29□□□□□ -1.24
IDH3A-206ENST00000558535 ARPC4P59998 168 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 RIPK1Q13546 671 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 SNX1Q13596 522 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 SUZ12Q15022 739 aaKnown RBP7.29□□□□□ -1.24
IDH3A-206ENST00000558535 LONRF2Q1L5Z9 754 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 CCDC40Q4G0X9 1142 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 FAAH2Q6GMR7 532 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 ZBTB8BQ8NAP8 495 aaPredicted RBP7.29□□□□□ -1.24
IDH3A-206ENST00000558535 CNNM3Q8NE01 707 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 WHAMMQ8TF30 809 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 ZMAT2Q96NC0 199 aaKnown RBP7.29□□□□□ -1.24
IDH3A-206ENST00000558535 CORO1BQ9BR76 489 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 TFCP2L1Q9NZI6 479 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 TRPC6Q9Y210 931 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 ITM2BQ9Y287 266 aa7.29□□□□□ -1.24
IDH3A-206ENST00000558535 WDR33Q9C0J8 1336 aaKnown RBP7.29□□□□□ -1.24
IDH3A-206ENST00000558535 A6NHS1 94 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 PPP1R12BO60237 982 aaPredicted RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 ZBTB7AO95365 584 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 TXLNAP40222 546 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 ZNF75DP51815 510 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 ETF1P62495 437 aaKnown RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 TUBA4AP68366 448 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 MRPS25P82663 173 aaKnown RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 MAP7Q14244 749 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 LBRQ14739 615 aaKnown RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 MYBPC3Q14896 1274 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 RC3H1Q5TC82 1133 aaKnown RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 FBXW10Q5XX13 1052 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 DZIP1Q86YF9 867 aaKnown RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 IFNL2Q8IZJ0 200 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 ARHGAP18Q8N392 663 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 GOLGA1Q92805 767 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 KCNN1Q92952 543 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 SYTL4Q96C24 671 aaPredicted RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 SENP7Q9BQF6 1050 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 USP26Q9BXU7 913 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 LRRC4BQ9NT99 713 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 DDX20Q9UHI6 824 aaKnown RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 PUF60Q9UHX1 559 aaKnown RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 IQSEC3Q9UPP2 1182 aaPredicted RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 PALLDQ8WX93 1383 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 PNPLA7Q6ZV29 1317 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 ZNF189O75820 626 aaPredicted RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 SASH3O75995 380 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 ATICP31939 592 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 SLC7A5Q01650 507 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 ACTN3Q08043 901 aaPredicted RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 KCNA1Q09470 495 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 ZNF827Q17R98 1081 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 RSRC2Q7L4I2 434 aaKnown RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 SLF2Q8IX21 1173 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 KRI1Q8N9T8 703 aaKnown RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 EIF2AQ9BY44 585 aaKnown RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 PARD6BQ9BYG5 372 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 MRPL46Q9H2W6 279 aaKnown RBP7.28□□□□□ -1.24
IDH3A-206ENST00000558535 VCX3AQ9NNX9 186 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 IL20Q9NYY1 176 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 MRFAP1Q9Y605 127 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 EMILIN1Q9Y6C2 1016 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 IGSF1Q8N6C5 1336 aa7.28□□□□□ -1.24
IDH3A-206ENST00000558535 RASSF10A6NK89 507 aa7.27□□□□□ -1.25
IDH3A-206ENST00000558535 FAM25EA8MYX2 175 aa7.27□□□□□ -1.25
IDH3A-206ENST00000558535 ERVV-2B6SEH9 535 aa7.27□□□□□ -1.25
IDH3A-206ENST00000558535 CLASP2O75122 1294 aaKnown RBP7.27□□□□□ -1.25
IDH3A-206ENST00000558535 HCLS1P14317 486 aaPredicted RBP7.27□□□□□ -1.25
IDH3A-206ENST00000558535 APLP1P51693 650 aa7.27□□□□□ -1.25
IDH3A-206ENST00000558535 PPFIA1Q13136 1202 aa7.27□□□□□ -1.25
IDH3A-206ENST00000558535 BLMHQ13867 455 aa7.27□□□□□ -1.25
IDH3A-206ENST00000558535 WHAMMP3Q1A5X7 153 aa7.27□□□□□ -1.25
IDH3A-206ENST00000558535 SGSM1Q2NKQ1 1148 aa7.27□□□□□ -1.25
IDH3A-206ENST00000558535 CCDC122Q5T0U0 273 aa7.27□□□□□ -1.25
IDH3A-206ENST00000558535 LARP1BQ659C4 914 aaKnown RBP7.27□□□□□ -1.25
IDH3A-206ENST00000558535 PACS1Q6VY07 963 aa7.27□□□□□ -1.25
IDH3A-206ENST00000558535 KIAA0825Q8IV33 1275 aa7.27□□□□□ -1.25
IDH3A-206ENST00000558535 DRC7Q8IY82 874 aa7.27□□□□□ -1.25
IDH3A-206ENST00000558535 CFAP61Q8NHU2 1237 aa7.27□□□□□ -1.25
IDH3A-206ENST00000558535 NEK9Q8TD19 979 aa7.27□□□□□ -1.25
IDH3A-206ENST00000558535 IRGQQ8WZA9 623 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms