RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 UNC5CLQ8IV45 518 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 IPO11Q9UI26 975 aaKnown RBP9.27□□□□□ -0.93
CHD8-213ENST00000557364 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.27□□□□□ -0.93
CHD8-213ENST00000557364 V9GY48 417 aaPredicted RBP9.27□□□□□ -0.93
CHD8-213ENST00000557364 COPB2P35606 906 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 TFAP4Q01664 338 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 CCDC184Q52MB2 194 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 HERC4Q5GLZ8 1057 aaPredicted RBP9.27□□□□□ -0.93
CHD8-213ENST00000557364 RNF187Q5TA31 235 aaPredicted RBP9.27□□□□□ -0.93
CHD8-213ENST00000557364 PIK3AP1Q6ZUJ8 805 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 AOPEPQ8N6M6 819 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 PAGR1Q9BTK6 254 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 NKIRAS1Q9NYS0 192 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 LARSQ9P2J5 1176 aaKnown RBP9.27□□□□□ -0.93
CHD8-213ENST00000557364 ADGRL3Q9HAR2 1447 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 GCNT3O95395 438 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 PSMC4P43686 418 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 CYP26C1Q6V0L0 522 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 FBXO11Q86XK2 927 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 MAPKAPK5Q8IW41 473 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 PLEKHM2Q8IWE5 1019 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 TRMT1Q9NXH9 659 aaKnown RBP9.27□□□□□ -0.93
CHD8-213ENST00000557364 KCNH3Q9ULD8 1083 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 ZMYM4Q5VZL5 1548 aa9.27□□□□□ -0.93
CHD8-213ENST00000557364 PSDA5PKW4 1024 aaPredicted RBP9.26□□□□□ -0.93
CHD8-213ENST00000557364 A1BGP04217 495 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 PAK1Q13153 545 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 METTL13Q8N6R0 699 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 ZNF496Q96IT1 587 aaPredicted RBP9.26□□□□□ -0.93
CHD8-213ENST00000557364 PSTPIP2Q9H939 334 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 GPR108Q9NPR9 543 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 PKD2L1Q9P0L9 805 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 TYRO3Q06418 890 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 PPARAQ07869 468 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 GEN1Q17RS7 908 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 NCAPGQ9BPX3 1015 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 PFDN4Q9NQP4 134 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 HESX1Q9UBX0 185 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 PARP2Q9UGN5 583 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 JAG2Q9Y219 1238 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 TIMM10P62072 90 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 SETDB1Q15047 1291 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 ZNF174Q15697 407 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.26□□□□□ -0.93
CHD8-213ENST00000557364 TM6SF1Q9BZW5 370 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 DONSONQ9NYP3 566 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 UTP11Q9Y3A2 253 aaKnown RBP9.26□□□□□ -0.93
CHD8-213ENST00000557364 ZCCHC11Q5TAX3 1644 aaKnown RBP9.26□□□□□ -0.93
CHD8-213ENST00000557364 A0A1B0GVL5 298 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 KRT9P35527 623 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 EIF4A1P60842 406 aaKnown RBP9.26□□□□□ -0.93
CHD8-213ENST00000557364 ZYXQ15942 572 aaKnown RBP9.26□□□□□ -0.93
CHD8-213ENST00000557364 USH1GQ495M9 461 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 ISM2Q6H9L7 571 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 CSGALNACT2Q8N6G5 542 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 PHACTR3Q96KR7 559 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 METTL14Q9HCE5 456 aaKnown RBP9.26□□□□□ -0.93
CHD8-213ENST00000557364 ATG3Q9NT62 314 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 CCPG1Q9ULG6 757 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 TXKP42681 527 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 RAB3IPQ96QF0 476 aaPredicted RBP9.26□□□□□ -0.93
CHD8-213ENST00000557364 LRFN2Q9ULH4 789 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 BPIFB4P59827 614 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 PPP2R3AQ06190 1150 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 CCDC6Q16204 474 aa9.26□□□□□ -0.93
CHD8-213ENST00000557364 SYNRGQ9UMZ2 1314 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 NCAPD2Q15021 1401 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 LIG4P49917 911 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 RASA3Q14644 834 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 ZSCAN23Q3MJ62 389 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 SLC27A3Q5K4L6 730 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 CLEC4GQ6UXB4 293 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.25□□□□□ -0.93
CHD8-213ENST00000557364 EIF3CLB5ME19 914 aaKnown RBP9.25□□□□□ -0.93
CHD8-213ENST00000557364 SLC27A2O14975 620 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 GNAT1P11488 350 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 METTL23Q86XA0 190 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 VPS52Q8N1B4 723 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 GIMAP8Q8ND71 665 aaPredicted RBP9.25□□□□□ -0.93
CHD8-213ENST00000557364 ZSCAN10Q96SZ4 725 aaPredicted RBP9.25□□□□□ -0.93
CHD8-213ENST00000557364 EIF3CQ99613 913 aaKnown RBP9.25□□□□□ -0.93
CHD8-213ENST00000557364 SLC8A2Q9UPR5 921 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 DYNC1I1O14576 645 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 GCFC2P16383 781 aaKnown RBP9.25□□□□□ -0.93
CHD8-213ENST00000557364 TNNI1P19237 187 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 SLC12A2P55011 1212 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 GCNAQ96QF7 691 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 NACC1Q96RE7 527 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 AMNQ9BXJ7 453 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 CUEDC2Q9H467 287 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 RPAP1Q9BWH6 1393 aaPredicted RBP9.25□□□□□ -0.93
CHD8-213ENST00000557364 DNM1Q05193 864 aaKnown RBP9.25□□□□□ -0.93
CHD8-213ENST00000557364 HS1BP3Q53T59 392 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 NCAPG2Q86XI2 1143 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 C2orf69Q8N8R5 385 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 PAIP2Q9BPZ3 127 aaKnown RBP9.25□□□□□ -0.93
CHD8-213ENST00000557364 KANSL2Q9H9L4 492 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 FAM8A1Q9UBU6 413 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 COL4A3BPQ9Y5P4 624 aa9.25□□□□□ -0.93
CHD8-213ENST00000557364 TET3O43151 1660 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms