RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 CNNM2Q9H8M5 875 aa10.66□□□□□ -0.7
MARK3-207ENST00000553942 FOCADQ5VW36 1801 aa10.66□□□□□ -0.7
MARK3-207ENST00000553942 VGLL3A8MV65 326 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 PLEKHA8P1O95397 391 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 HLA-DOAP06340 250 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 HMGB1P09429 215 aaKnown RBP10.65□□□□□ -0.7
MARK3-207ENST00000553942 BRD2P25440 801 aaKnown RBP10.65□□□□□ -0.7
MARK3-207ENST00000553942 ECE1P42892 770 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 USP48Q86UV5 1035 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 SPICE1Q8N0Z3 855 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 AGXT2Q9BYV1 514 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 ZNF408Q9H9D4 720 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 FAM217BQ9NTX9 383 aaPredicted RBP10.65□□□□□ -0.7
MARK3-207ENST00000553942 CLIP2Q9UDT6 1046 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 CLEC11AQ9Y240 323 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 CCDC69A6NI79 296 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 ORC4O43929 436 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 SLC3A2P08195 630 aaKnown RBP10.65□□□□□ -0.7
MARK3-207ENST00000553942 TAL1P17542 331 aaPredicted RBP10.65□□□□□ -0.7
MARK3-207ENST00000553942 GJB2P29033 226 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 GUCY1A2P33402 732 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 GABPB1Q06547 395 aaPredicted RBP10.65□□□□□ -0.7
MARK3-207ENST00000553942 CERKLQ49MI3 558 aaPredicted RBP10.65□□□□□ -0.7
MARK3-207ENST00000553942 SIAH1Q8IUQ4 282 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 MTMR14Q8NCE2 650 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 NUP88Q99567 741 aaPredicted RBP10.65□□□□□ -0.7
MARK3-207ENST00000553942 TMEM47Q9BQJ4 181 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 TRIM34Q9BYJ4 488 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 SLC12A7Q9Y666 1083 aa10.65□□□□□ -0.7
MARK3-207ENST00000553942 FRMPD2Q68DX3 1309 aaPredicted RBP10.65□□□□□ -0.71
MARK3-207ENST00000553942 IRX3P78415 501 aaPredicted RBP10.64□□□□□ -0.71
MARK3-207ENST00000553942 USP17L2Q6R6M4 530 aa10.64□□□□□ -0.71
MARK3-207ENST00000553942 IQCA1Q86XH1 822 aa10.64□□□□□ -0.71
MARK3-207ENST00000553942 ZNF654Q8IZM8 581 aa10.64□□□□□ -0.71
MARK3-207ENST00000553942 ACER1Q8TDN7 264 aa10.64□□□□□ -0.71
MARK3-207ENST00000553942 GTF3C6Q969F1 213 aa10.64□□□□□ -0.71
MARK3-207ENST00000553942 ZFP91Q96JP5 570 aaPredicted RBP10.64□□□□□ -0.71
MARK3-207ENST00000553942 FEZ1Q99689 392 aa10.64□□□□□ -0.71
MARK3-207ENST00000553942 ADARB2Q9NS39 739 aaKnown RBP10.64□□□□□ -0.71
MARK3-207ENST00000553942 ROBO3Q96MS0 1386 aa10.64□□□□□ -0.71
MARK3-207ENST00000553942 A0A1W2PRG0 241 aa10.64□□□□□ -0.71
MARK3-207ENST00000553942 ERICH2A1L162 156 aa10.64□□□□□ -0.71
MARK3-207ENST00000553942 ENTPD3O75355 529 aa10.64□□□□□ -0.71
MARK3-207ENST00000553942 SNAP25P60880 206 aa10.64□□□□□ -0.71
MARK3-207ENST00000553942 KIAA1755Q5JYT7 1200 aa10.64□□□□□ -0.71
MARK3-207ENST00000553942 FAM173BQ6P4H8 233 aa10.64□□□□□ -0.71
MARK3-207ENST00000553942 TAF1DQ9H5J8 278 aaPredicted RBP10.64□□□□□ -0.71
MARK3-207ENST00000553942 CGNQ9P2M7 1197 aaKnown RBP10.64□□□□□ -0.71
MARK3-207ENST00000553942 ATRNL1Q5VV63 1379 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 GOLGA8AA7E2F4 631 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 ZBTB43O43298 467 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 EEF2P13639 858 aaKnown RBP10.63□□□□□ -0.71
MARK3-207ENST00000553942 METAP2P50579 478 aaKnown RBP eCLIP10.63□□□□□ -0.71
MARK3-207ENST00000553942 CUL4AQ13619 759 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 SLC35G1Q2M3R5 365 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 KRT26Q7Z3Y9 468 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 FERMT3Q86UX7 667 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 PLCD3Q8N3E9 789 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 UBA5Q9GZZ9 404 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 ZDHHC9Q9Y397 364 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 CCDC66A2RUB6 948 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 USP17L5A8MUK1 530 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 FDPSP14324 419 aaKnown RBP10.63□□□□□ -0.71
MARK3-207ENST00000553942 IRX5P78411 483 aaPredicted RBP10.63□□□□□ -0.71
MARK3-207ENST00000553942 TROAPQ12815 778 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 ABCB5Q2M3G0 1257 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 KCTD1Q719H9 257 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 PNMA1Q8ND90 353 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 NSUN7Q8NE18 718 aaKnown RBP10.63□□□□□ -0.71
MARK3-207ENST00000553942 TMEM87BQ96K49 555 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 TSPYL1Q9H0U9 437 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 DHX36Q9H2U1 1008 aaKnown RBP10.63□□□□□ -0.71
MARK3-207ENST00000553942 VAT1LQ9HCJ6 419 aa10.63□□□□□ -0.71
MARK3-207ENST00000553942 PTPDC1A2A3K4 754 aa10.62□□□□□ -0.71
MARK3-207ENST00000553942 ADAMTS3O15072 1205 aa10.62□□□□□ -0.71
MARK3-207ENST00000553942 PFKFB2O60825 505 aa10.62□□□□□ -0.71
MARK3-207ENST00000553942 SLC16A2P36021 539 aa10.62□□□□□ -0.71
MARK3-207ENST00000553942 TTBK2Q6IQ55 1244 aa10.62□□□□□ -0.71
MARK3-207ENST00000553942 TATDN1Q6P1N9 297 aa10.62□□□□□ -0.71
MARK3-207ENST00000553942 CERS3Q8IU89 383 aa10.62□□□□□ -0.71
MARK3-207ENST00000553942 NEDD1Q8NHV4 660 aa10.62□□□□□ -0.71
MARK3-207ENST00000553942 RNF216Q9NWF9 866 aaPredicted RBP10.62□□□□□ -0.71
MARK3-207ENST00000553942 MTMR4Q9NYA4 1195 aa10.62□□□□□ -0.71
MARK3-207ENST00000553942 SMC3Q9UQE7 1217 aa10.62□□□□□ -0.71
MARK3-207ENST00000553942 SSC5DA1L4H1 1573 aa10.62□□□□□ -0.71
MARK3-207ENST00000553942 PHF20L1A8MW92 1017 aa10.61□□□□□ -0.71
MARK3-207ENST00000553942 SART3Q15020 963 aaKnown RBP10.61□□□□□ -0.71
MARK3-207ENST00000553942 ANKRD1Q15327 319 aa10.61□□□□□ -0.71
MARK3-207ENST00000553942 TMED8Q6PL24 325 aaPredicted RBP10.61□□□□□ -0.71
MARK3-207ENST00000553942 RGS22Q8NE09 1264 aa10.61□□□□□ -0.71
MARK3-207ENST00000553942 KAT14Q9H8E8 782 aa10.61□□□□□ -0.71
MARK3-207ENST00000553942 GPCPD1Q9NPB8 672 aa10.61□□□□□ -0.71
MARK3-207ENST00000553942 KIF3AQ9Y496 699 aa10.61□□□□□ -0.71
MARK3-207ENST00000553942 VPS37CA5D8V6 355 aaPredicted RBP10.61□□□□□ -0.71
MARK3-207ENST00000553942 LIFRP42702 1097 aa10.61□□□□□ -0.71
MARK3-207ENST00000553942 FAM83AQ86UY5 434 aa10.61□□□□□ -0.71
MARK3-207ENST00000553942 FOXP4Q8IVH2 680 aaPredicted RBP10.61□□□□□ -0.71
MARK3-207ENST00000553942 FANCBQ8NB91 859 aa10.61□□□□□ -0.71
MARK3-207ENST00000553942 DCPSQ96C86 337 aaKnown RBP10.61□□□□□ -0.71
MARK3-207ENST00000553942 SHISA4Q96DD7 197 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms