RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 SEC23AQ15436 765 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 ASPRV1Q53RT3 343 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 LRRC8AQ8IWT6 810 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 TTC12Q9H892 705 aaPredicted RBP8.38□□□□□ -1.07
PDGFC-203ENST00000502773 PCDHA4Q9UN74 947 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 PARP3Q9Y6F1 533 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 MYH7P12883 1935 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 CDC27P30260 824 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 ENAHQ8N8S7 591 aaPredicted RBP8.38□□□□□ -1.07
PDGFC-203ENST00000502773 PHF20Q9BVI0 1012 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 TMOD2Q9NZR1 351 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 COL16A1Q07092 1604 aaPredicted RBP8.38□□□□□ -1.07
PDGFC-203ENST00000502773 MROH7-TTC4A0A0A0MT08 1334 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 SERPINB2P05120 415 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 PTGS1P23219 599 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 PRPHP41219 470 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 GRM4Q14833 912 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 C12orf60Q5U649 245 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 CEP135Q66GS9 1140 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 TMC6Q7Z403 805 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 DAGLBQ8NCG7 672 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 PNMA1Q8ND90 353 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 CELF1Q92879 486 aaKnown RBP8.38□□□□□ -1.07
PDGFC-203ENST00000502773 CHAMP1Q96JM3 812 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 EHMT1Q9H9B1 1298 aa8.38□□□□□ -1.07
PDGFC-203ENST00000502773 CWC15Q9P013 229 aaKnown RBP8.38□□□□□ -1.07
PDGFC-203ENST00000502773 ARAP2Q8WZ64 1704 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 WNK3Q9BYP7 1800 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 ARHGAP6O43182 974 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 PRKAB2O43741 272 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 GTPBP6O43824 516 aaPredicted RBP8.37□□□□□ -1.07
PDGFC-203ENST00000502773 NPR1P16066 1061 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 ATP2B1P20020 1258 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 CNGA4Q8IV77 575 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 SDR42E1Q8WUS8 393 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 LUC7LQ9NQ29 371 aaKnown RBP8.37□□□□□ -1.07
PDGFC-203ENST00000502773 PSMA7O14818 248 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 HOXA10P31260 410 aaPredicted RBP8.37□□□□□ -1.07
PDGFC-203ENST00000502773 MRPL12P52815 198 aaKnown RBP8.37□□□□□ -1.07
PDGFC-203ENST00000502773 NONOQ15233 471 aaKnown RBP eCLIP8.37□□□□□ -1.07
PDGFC-203ENST00000502773 PTPAQ15257 358 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 GPATCH4Q5T3I0 446 aaKnown RBP8.37□□□□□ -1.07
PDGFC-203ENST00000502773 WWC2Q6AWC2 1192 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 OTUD7BQ6GQQ9 843 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 RCSD1Q6JBY9 416 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 SPZ1Q9BXG8 430 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 DHX36Q9H2U1 1008 aaKnown RBP8.37□□□□□ -1.07
PDGFC-203ENST00000502773 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.37□□□□□ -1.07
PDGFC-203ENST00000502773 POLR2DO15514 142 aaKnown RBP8.37□□□□□ -1.07
PDGFC-203ENST00000502773 SPATA1Q5VX52 437 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 ZNF397Q8NF99 534 aaPredicted RBP8.37□□□□□ -1.07
PDGFC-203ENST00000502773 PSMD1Q99460 953 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 IFNKQ9P0W0 207 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 PNMA2Q9UL42 364 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 RREB1Q92766 1687 aa8.37□□□□□ -1.07
PDGFC-203ENST00000502773 LTBP4Q8N2S1 1624 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 POTEB2H3BUK9 544 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 STAT6P42226 847 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 UTP14CQ5TAP6 766 aaKnown RBP8.36□□□□□ -1.07
PDGFC-203ENST00000502773 RRAGBQ5VZM2 374 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 ZNF772Q68DY9 489 aaPredicted RBP8.36□□□□□ -1.07
PDGFC-203ENST00000502773 KCTD17Q8N5Z5 321 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 ZKSCAN3Q9BRR0 538 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 NUP58Q9BVL2 599 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 GOLPH3LQ9H4A5 285 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 LAMB2P55268 1798 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 KCNQ2O43526 872 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 GTF2F1P35269 517 aaKnown RBP eCLIP8.36□□□□□ -1.07
PDGFC-203ENST00000502773 MMP14P50281 582 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 SEPT2Q15019 361 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 EHBP1Q8NDI1 1231 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 MNS1Q8NEH6 495 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 NEDD1Q8NHV4 660 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 MRIQ9BWK5 157 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 H7C1D1 291 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 ONECUT3O60422 494 aaPredicted RBP8.36□□□□□ -1.07
PDGFC-203ENST00000502773 IL1R1P14778 569 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 GCFC2P16383 781 aaKnown RBP8.36□□□□□ -1.07
PDGFC-203ENST00000502773 RXRAP19793 462 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 NAPAP54920 295 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 FKBP1AP62942 108 aaKnown RBP8.36□□□□□ -1.07
PDGFC-203ENST00000502773 HDLBPQ00341 1268 aaKnown RBP8.36□□□□□ -1.07
PDGFC-203ENST00000502773 RAB11FIP4Q86YS3 637 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 SEPT12Q8IYM1 358 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 CD209Q9NNX6 404 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 TFCP2L1Q9NZI6 479 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 STX8Q9UNK0 236 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 TIAM2Q8IVF5 1701 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 GPR75-ASB3A0A0A6YYF3 556 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 ESYT2A0FGR8 921 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 FOXP2O15409 715 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 STX10O60499 249 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 SLFNL1Q499Z3 407 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 NT5DC1Q5TFE4 455 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 CCDC70Q6NSX1 233 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 CCDC82Q8N4S0 544 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 TSG101Q99816 390 aa8.36□□□□□ -1.07
PDGFC-203ENST00000502773 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.36□□□□□ -1.07
PDGFC-203ENST00000502773 ATP2C1P98194 919 aaPredicted RBP8.35□□□□□ -1.07
PDGFC-203ENST00000502773 TROAPQ12815 778 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms