RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 RAP1GAPP47736 663 aa7.83□□□□□ -1.16
SMC4-219ENST00000487747 TNNI2P48788 182 aa7.83□□□□□ -1.16
SMC4-219ENST00000487747 TIGD5Q53EQ6 642 aa7.83□□□□□ -1.16
SMC4-219ENST00000487747 FBXL19Q6PCT2 694 aa7.83□□□□□ -1.16
SMC4-219ENST00000487747 REC114Q7Z4M0 266 aa7.83□□□□□ -1.16
SMC4-219ENST00000487747 KIF2CQ99661 725 aa7.83□□□□□ -1.16
SMC4-219ENST00000487747 TSPAN15O95858 294 aa7.82□□□□□ -1.16
SMC4-219ENST00000487747 ZGLP1P0C6A0 271 aa7.82□□□□□ -1.16
SMC4-219ENST00000487747 RAC2P15153 192 aa7.82□□□□□ -1.16
SMC4-219ENST00000487747 FAM196AQ6ZSG2 479 aa7.82□□□□□ -1.16
SMC4-219ENST00000487747 ERMP1Q7Z2K6 904 aa7.82□□□□□ -1.16
SMC4-219ENST00000487747 C1QL4Q86Z23 238 aa7.82□□□□□ -1.16
SMC4-219ENST00000487747 VWCEQ96DN2 955 aa7.82□□□□□ -1.16
SMC4-219ENST00000487747 CCDC74BQ96LY2 380 aa7.82□□□□□ -1.16
SMC4-219ENST00000487747 RNF32Q9H0A6 362 aa7.82□□□□□ -1.16
SMC4-219ENST00000487747 KCNH3Q9ULD8 1083 aa7.82□□□□□ -1.16
SMC4-219ENST00000487747 MPP2Q14168 576 aa7.81□□□□□ -1.16
SMC4-219ENST00000487747 CCDC27Q2M243 656 aa7.81□□□□□ -1.16
SMC4-219ENST00000487747 FBLN7Q53RD9 439 aa7.81□□□□□ -1.16
SMC4-219ENST00000487747 LTKP29376 864 aa7.8□□□□□ -1.16
SMC4-219ENST00000487747 CRKP46108 304 aa7.8□□□□□ -1.16
SMC4-219ENST00000487747 PHACTR4Q8IZ21 702 aa7.8□□□□□ -1.16
SMC4-219ENST00000487747 FBXO15Q8NCQ5 510 aaPredicted RBP7.8□□□□□ -1.16
SMC4-219ENST00000487747 KRTAP4-11Q9BYQ6 195 aa7.8□□□□□ -1.16
SMC4-219ENST00000487747 DCP1AQ9NPI6 582 aaPredicted RBP7.8□□□□□ -1.16
SMC4-219ENST00000487747 RBM47A0AV96 593 aaKnown RBP7.79□□□□□ -1.16
SMC4-219ENST00000487747 SLC22A31A6NKX4 558 aa7.79□□□□□ -1.16
SMC4-219ENST00000487747 UBOX5O94941 541 aa7.79□□□□□ -1.16
SMC4-219ENST00000487747 PWP1Q13610 501 aa7.79□□□□□ -1.16
SMC4-219ENST00000487747 DIEXFQ68CQ4 756 aaKnown RBP7.79□□□□□ -1.16
SMC4-219ENST00000487747 BRMS1Q9HCU9 246 aa7.79□□□□□ -1.16
SMC4-219ENST00000487747 GREM1O60565 184 aa7.78□□□□□ -1.16
SMC4-219ENST00000487747 GALK1P51570 392 aa7.78□□□□□ -1.16
SMC4-219ENST00000487747 TEKQ02763 1124 aa7.78□□□□□ -1.16
SMC4-219ENST00000487747 ARSHQ5FYA8 562 aa7.78□□□□□ -1.16
SMC4-219ENST00000487747 LCNL1Q6ZST4 164 aa7.78□□□□□ -1.16
SMC4-219ENST00000487747 PDZD8Q8NEN9 1154 aa7.78□□□□□ -1.16
SMC4-219ENST00000487747 PPP1R16BQ96T49 567 aa7.78□□□□□ -1.16
SMC4-219ENST00000487747 ASPNQ9BXN1 380 aa7.78□□□□□ -1.16
SMC4-219ENST00000487747 EPB41L4BQ9H329 900 aa7.78□□□□□ -1.16
SMC4-219ENST00000487747 KCNQ5Q9NR82 932 aa7.78□□□□□ -1.16
SMC4-219ENST00000487747 PCDHB14Q9Y5E9 798 aa7.78□□□□□ -1.16
SMC4-219ENST00000487747 RGS13O14921 159 aa7.77□□□□□ -1.17
SMC4-219ENST00000487747 POLR2BP30876 1174 aaKnown RBP7.77□□□□□ -1.17
SMC4-219ENST00000487747 EIF4A3P38919 411 aaKnown RBP7.77□□□□□ -1.17
SMC4-219ENST00000487747 ANKLE2Q86XL3 938 aa7.77□□□□□ -1.17
SMC4-219ENST00000487747 LRRC56Q8IYG6 542 aaPredicted RBP7.77□□□□□ -1.17
SMC4-219ENST00000487747 ETV2O00321 342 aaPredicted RBP7.76□□□□□ -1.17
SMC4-219ENST00000487747 EFEMP2O95967 443 aa7.76□□□□□ -1.17
SMC4-219ENST00000487747 GBP1P32455 592 aa7.76□□□□□ -1.17
SMC4-219ENST00000487747 ZNF296Q8WUU4 475 aaPredicted RBP7.76□□□□□ -1.17
SMC4-219ENST00000487747 TOX2Q96NM4 488 aa7.76□□□□□ -1.17
SMC4-219ENST00000487747 LRRC3Q9BY71 257 aa7.76□□□□□ -1.17
SMC4-219ENST00000487747 ADAMTS1Q9UHI8 967 aa7.76□□□□□ -1.17
SMC4-219ENST00000487747 NPIPB6E9PJ23 425 aa7.75□□□□□ -1.17
SMC4-219ENST00000487747 NFIBO00712 420 aa7.75□□□□□ -1.17
SMC4-219ENST00000487747 ERCC3P19447 782 aa7.75□□□□□ -1.17
SMC4-219ENST00000487747 SNW1Q13573 536 aaKnown RBP7.75□□□□□ -1.17
SMC4-219ENST00000487747 ATG14Q6ZNE5 492 aa7.75□□□□□ -1.17
SMC4-219ENST00000487747 TMC3Q7Z5M5 1100 aa7.75□□□□□ -1.17
SMC4-219ENST00000487747 G6PC3Q9BUM1 346 aa7.75□□□□□ -1.17
SMC4-219ENST00000487747 BCL2L13Q9BXK5 485 aa7.75□□□□□ -1.17
SMC4-219ENST00000487747 UBP1Q9NZI7 540 aa7.75□□□□□ -1.17
SMC4-219ENST00000487747 ZNF281Q9Y2X9 895 aa7.75□□□□□ -1.17
SMC4-219ENST00000487747 NOTOA8MTQ0 251 aa7.74□□□□□ -1.17
SMC4-219ENST00000487747 PSPNO60542 156 aa7.74□□□□□ -1.17
SMC4-219ENST00000487747 NMIQ13287 307 aaPredicted RBP7.74□□□□□ -1.17
SMC4-219ENST00000487747 MRPL58Q14197 206 aaKnown RBP7.74□□□□□ -1.17
SMC4-219ENST00000487747 CLEC16AQ2KHT3 1053 aa7.74□□□□□ -1.17
SMC4-219ENST00000487747 CWF19L2Q2TBE0 894 aaKnown RBP7.74□□□□□ -1.17
SMC4-219ENST00000487747 OVOS1Q6IE37 1185 aa7.74□□□□□ -1.17
SMC4-219ENST00000487747 USHBP1Q8N6Y0 703 aa7.74□□□□□ -1.17
SMC4-219ENST00000487747 GIPC2Q8TF65 315 aa7.74□□□□□ -1.17
SMC4-219ENST00000487747 LINC01599Q8WXQ3 324 aa7.74□□□□□ -1.17
SMC4-219ENST00000487747 SHISA4Q96DD7 197 aa7.74□□□□□ -1.17
SMC4-219ENST00000487747 ANTXR1Q9H6X2 564 aa7.74□□□□□ -1.17
SMC4-219ENST00000487747 CD320Q9NPF0 282 aa7.74□□□□□ -1.17
SMC4-219ENST00000487747 GGT7Q9UJ14 662 aa7.74□□□□□ -1.17
SMC4-219ENST00000487747 SUPT16HQ9Y5B9 1047 aaKnown RBP7.74□□□□□ -1.17
SMC4-219ENST00000487747 ROBO2Q9HCK4 1378 aa7.73□□□□□ -1.17
SMC4-219ENST00000487747 FITM1A5D6W6 292 aa7.73□□□□□ -1.17
SMC4-219ENST00000487747 ATE1O95260 518 aa7.73□□□□□ -1.17
SMC4-219ENST00000487747 TMEM253P0C7T8 217 aa7.73□□□□□ -1.17
SMC4-219ENST00000487747 RAG1P15918 1043 aa7.73□□□□□ -1.17
SMC4-219ENST00000487747 CLCQ05315 142 aa7.73□□□□□ -1.17
SMC4-219ENST00000487747 NR0B2Q15466 257 aa7.73□□□□□ -1.17
SMC4-219ENST00000487747 OXR1Q8N573 874 aa7.73□□□□□ -1.17
SMC4-219ENST00000487747 KCNN1Q92952 543 aa7.73□□□□□ -1.17
SMC4-219ENST00000487747 HDAC8Q9BY41 377 aa7.73□□□□□ -1.17
SMC4-219ENST00000487747 GMIPQ9P107 970 aa7.73□□□□□ -1.17
SMC4-219ENST00000487747 MINPP1Q9UNW1 487 aa7.73□□□□□ -1.17
SMC4-219ENST00000487747 MYOCOSA0A1B0GUC4 107 aa7.72□□□□□ -1.17
SMC4-219ENST00000487747 MED14OSP0DP75 135 aa7.72□□□□□ -1.17
SMC4-219ENST00000487747 ZSCAN22P10073 491 aaPredicted RBP7.72□□□□□ -1.17
SMC4-219ENST00000487747 SEZ6Q53EL9 994 aa7.72□□□□□ -1.17
SMC4-219ENST00000487747 LDLRAD1Q5T700 205 aa7.72□□□□□ -1.17
SMC4-219ENST00000487747 NBPF12Q5TAG4 269 aaPredicted RBP7.72□□□□□ -1.17
SMC4-219ENST00000487747 LILRA2Q8N149 483 aa7.72□□□□□ -1.17
SMC4-219ENST00000487747 DHX38Q92620 1227 aaKnown RBP7.72□□□□□ -1.17
SMC4-219ENST00000487747 TCTN2Q96GX1 697 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms