RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 EMILIN3Q9NT22 766 aa14.85□□□□□ -0.03
SPTLC1-204ENST00000469778 MYH8P13535 1937 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 A0A1W2PRG0 241 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 USP17L15C9J2P7 530 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 USP17L13C9JLJ4 530 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 USP17L11C9JVI0 530 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 USP17L18D6R9N7 530 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 USP17L22D6RA61 530 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 USP17L17D6RBQ6 530 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 USP17L19D6RCP7 530 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 USP17L20D6RJB6 530 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 WDR46O15213 610 aaKnown RBP14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 OSBPP22059 807 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 ATP2B2Q01814 1243 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 USP17L24Q0WX57 530 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 SHROOM1Q2M3G4 852 aaPredicted RBP14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 NOM1Q5C9Z4 860 aaKnown RBP14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 MB21D2Q8IYB1 491 aaPredicted RBP14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 GTF3C2Q8WUA4 911 aaPredicted RBP14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 GMCL1Q96IK5 515 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 PTPN18Q99952 460 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 WBP1LQ9NX94 342 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 HOXC10Q9NYD6 342 aa14.84□□□□□ -0.03
SPTLC1-204ENST00000469778 BTBD19C9JJ37 291 aa14.83□□□□□ -0.04
SPTLC1-204ENST00000469778 F5H6K3 240 aa14.83□□□□□ -0.04
SPTLC1-204ENST00000469778 LIFRP42702 1097 aa14.83□□□□□ -0.04
SPTLC1-204ENST00000469778 KLRC3Q07444 240 aa14.83□□□□□ -0.04
SPTLC1-204ENST00000469778 GPAT2Q6NUI2 795 aa14.83□□□□□ -0.04
SPTLC1-204ENST00000469778 GADL1Q6ZQY3 521 aa14.83□□□□□ -0.04
SPTLC1-204ENST00000469778 STOX1Q6ZVD7 989 aa14.83□□□□□ -0.04
SPTLC1-204ENST00000469778 CCDC84Q86UT8 332 aaPredicted RBP14.83□□□□□ -0.04
SPTLC1-204ENST00000469778 RASEFQ8IZ41 740 aa14.83□□□□□ -0.04
SPTLC1-204ENST00000469778 FBXL16Q8N461 479 aa14.83□□□□□ -0.04
SPTLC1-204ENST00000469778 TMEM47Q9BQJ4 181 aa14.83□□□□□ -0.04
SPTLC1-204ENST00000469778 ZFYVE28Q9HCC9 887 aa14.83□□□□□ -0.04
SPTLC1-204ENST00000469778 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.83□□□□□ -0.04
SPTLC1-204ENST00000469778 SNX14Q9Y5W7 946 aa14.83□□□□□ -0.04
SPTLC1-204ENST00000469778 ATAD5Q96QE3 1844 aa14.82□□□□□ -0.04
SPTLC1-204ENST00000469778 THSD7BQ9C0I4 1608 aa14.82□□□□□ -0.04
SPTLC1-204ENST00000469778 PDHXO00330 501 aa14.82□□□□□ -0.04
SPTLC1-204ENST00000469778 IFIT3O14879 490 aaKnown RBP14.82□□□□□ -0.04
SPTLC1-204ENST00000469778 PLA2G6O60733 806 aa14.82□□□□□ -0.04
SPTLC1-204ENST00000469778 GCLCP48506 637 aaPredicted RBP14.82□□□□□ -0.04
SPTLC1-204ENST00000469778 EXOSC10Q01780 885 aaKnown RBP14.82□□□□□ -0.04
SPTLC1-204ENST00000469778 SEC23AQ15436 765 aa14.82□□□□□ -0.04
SPTLC1-204ENST00000469778 IFIT1BQ5T764 474 aaKnown RBP14.82□□□□□ -0.04
SPTLC1-204ENST00000469778 ENAHQ8N8S7 591 aaPredicted RBP14.82□□□□□ -0.04
SPTLC1-204ENST00000469778 ZIC5Q96T25 663 aa14.82□□□□□ -0.04
SPTLC1-204ENST00000469778 PARK7Q99497 189 aaKnown RBP14.82□□□□□ -0.04
SPTLC1-204ENST00000469778 KAT14Q9H8E8 782 aa14.82□□□□□ -0.04
SPTLC1-204ENST00000469778 MYPNQ86TC9 1320 aa14.82□□□□□ -0.04
SPTLC1-204ENST00000469778 GREB1LQ9C091 1923 aaPredicted RBP14.82□□□□□ -0.04
SPTLC1-204ENST00000469778 PHIPQ8WWQ0 1821 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 IGF2BP3O00425 579 aaKnown RBP eCLIP14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 PRC1O43663 620 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 FDX1P10109 184 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 VCAM1P19320 739 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 COG2Q14746 738 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 WTAPQ15007 396 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 SLFN13Q68D06 897 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 BLOC1S2Q6QNY1 142 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 CATSPERGQ6ZRH7 1159 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 CYB5R4Q7L1T6 521 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 FAM43AQ8N2R8 423 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 IGDCC4Q8TDY8 1250 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 DCAF4Q8WV16 495 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 ZSWIM6Q9HCJ5 1215 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 RNF186Q9NXI6 227 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 TAF6LQ9Y6J9 622 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 TNKSO95271 1327 aa14.81□□□□□ -0.04
SPTLC1-204ENST00000469778 NMT2O60551 498 aa14.8□□□□□ -0.04
SPTLC1-204ENST00000469778 NDUFB10O96000 172 aa14.8□□□□□ -0.04
SPTLC1-204ENST00000469778 IRX3P78415 501 aaPredicted RBP14.8□□□□□ -0.04
SPTLC1-204ENST00000469778 TMEM67Q5HYA8 995 aa14.8□□□□□ -0.04
SPTLC1-204ENST00000469778 GPATCH4Q5T3I0 446 aaKnown RBP14.8□□□□□ -0.04
SPTLC1-204ENST00000469778 LBX2Q6XYB7 198 aa14.8□□□□□ -0.04
SPTLC1-204ENST00000469778 SGMS1Q86VZ5 419 aa14.8□□□□□ -0.04
SPTLC1-204ENST00000469778 CHURC1Q8WUH1 139 aa14.8□□□□□ -0.04
SPTLC1-204ENST00000469778 JAKMIP1Q96N16 626 aaKnown RBP14.8□□□□□ -0.04
SPTLC1-204ENST00000469778 MAP3K14Q99558 947 aa14.8□□□□□ -0.04
SPTLC1-204ENST00000469778 BACH2Q9BYV9 841 aa14.8□□□□□ -0.04
SPTLC1-204ENST00000469778 CYP46A1Q9Y6A2 500 aa14.8□□□□□ -0.04
SPTLC1-204ENST00000469778 TLR2O60603 784 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 SEC24BO95487 1268 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 CALM1P0DP23 149 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 CALM2P0DP24 149 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 CALM3P0DP25 149 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 BMP3P12645 472 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 SLC1A4P43007 532 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 RBM25P49756 843 aaKnown RBP14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 PPP2R5BQ15173 497 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 TAF1CQ15572 869 aaPredicted RBP14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 ADCK5Q3MIX3 580 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 TREML2Q5T2D2 321 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 RUFY3Q7L099 469 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 CATIPQ7Z7H3 387 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 FAM160B2Q86V87 743 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 CLEC10AQ8IUN9 316 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 MB21D1Q8N884 522 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 PNMA1Q8ND90 353 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms