RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 TATDN1Q6P1N9 297 aa22.78■■□□□ 1.24
USP11-205ENST00000467378 C11orf49Q9H6J7 331 aa22.78■■□□□ 1.24
USP11-205ENST00000467378 GTF3C3Q9Y5Q9 886 aa22.78■■□□□ 1.24
USP11-205ENST00000467378 CTNND1O60716 968 aaKnown RBP22.77■■□□□ 1.24
USP11-205ENST00000467378 PTPRAP18433 802 aa22.77■■□□□ 1.24
USP11-205ENST00000467378 AMOTL1Q8IY63 956 aa22.77■■□□□ 1.24
USP11-205ENST00000467378 TRIM34Q9BYJ4 488 aa22.77■■□□□ 1.24
USP11-205ENST00000467378 NAPBQ9H115 298 aa22.77■■□□□ 1.24
USP11-205ENST00000467378 AFG3L2Q9Y4W6 797 aa22.77■■□□□ 1.24
USP11-205ENST00000467378 MINDY4BA8MYZ0 360 aa22.76■■□□□ 1.23
USP11-205ENST00000467378 SGSM2O43147 1006 aa22.76■■□□□ 1.23
USP11-205ENST00000467378 FGAP02671 866 aa22.76■■□□□ 1.23
USP11-205ENST00000467378 HMGCRP04035 888 aa22.76■■□□□ 1.23
USP11-205ENST00000467378 DYNLL2Q96FJ2 89 aa22.76■■□□□ 1.23
USP11-205ENST00000467378 HMX1Q9NP08 348 aaPredicted RBP22.76■■□□□ 1.23
USP11-205ENST00000467378 SHMT1P34896 483 aa22.75■■□□□ 1.23
USP11-205ENST00000467378 CAP2P40123 477 aa22.75■■□□□ 1.23
USP11-205ENST00000467378 RPTORQ8N122 1335 aa22.75■■□□□ 1.23
USP11-205ENST00000467378 UNC80Q8N2C7 3258 aa22.74■■□□□ 1.23
USP11-205ENST00000467378 TRIM75PA6NK02 468 aa22.74■■□□□ 1.23
USP11-205ENST00000467378 CDC45O75419 566 aa22.74■■□□□ 1.23
USP11-205ENST00000467378 JAG1P78504 1218 aa22.74■■□□□ 1.23
USP11-205ENST00000467378 C16orf86Q6ZW13 317 aa22.74■■□□□ 1.23
USP11-205ENST00000467378 DSCC1Q9BVC3 393 aa22.74■■□□□ 1.23
USP11-205ENST00000467378 SWAP70Q9UH65 585 aa22.74■■□□□ 1.23
USP11-205ENST00000467378 ZMYM6O95789 1325 aa22.74■■□□□ 1.23
USP11-205ENST00000467378 ROBO3Q96MS0 1386 aa22.74■■□□□ 1.23
USP11-205ENST00000467378 PLXNB2O15031 1838 aa22.73■■□□□ 1.23
USP11-205ENST00000467378 LAMA4Q16363 1823 aa22.73■■□□□ 1.23
USP11-205ENST00000467378 CDK8P49336 464 aa22.73■■□□□ 1.23
USP11-205ENST00000467378 TRIM32Q13049 653 aa22.73■■□□□ 1.23
USP11-205ENST00000467378 FAM110CQ1W6H9 321 aa22.73■■□□□ 1.23
USP11-205ENST00000467378 SLC44A5Q8NCS7 719 aa22.73■■□□□ 1.23
USP11-205ENST00000467378 ESYT1Q9BSJ8 1104 aa22.73■■□□□ 1.23
USP11-205ENST00000467378 PNMA3Q9UL41 463 aa22.73■■□□□ 1.23
USP11-205ENST00000467378 AGTPBP1Q9UPW5 1226 aa22.73■■□□□ 1.23
USP11-205ENST00000467378 PPARAQ07869 468 aa22.72■■□□□ 1.23
USP11-205ENST00000467378 CERKLQ49MI3 558 aaPredicted RBP22.71■■□□□ 1.23
USP11-205ENST00000467378 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.71■■□□□ 1.23
USP11-205ENST00000467378 ANAPC4Q9UJX5 808 aa22.71■■□□□ 1.23
USP11-205ENST00000467378 GDF11O95390 407 aa22.7■■□□□ 1.22
USP11-205ENST00000467378 PTH1RQ03431 593 aa22.7■■□□□ 1.22
USP11-205ENST00000467378 SHROOM1Q2M3G4 852 aaPredicted RBP22.7■■□□□ 1.22
USP11-205ENST00000467378 TREML2Q5T2D2 321 aa22.7■■□□□ 1.22
USP11-205ENST00000467378 CCDC84Q86UT8 332 aaPredicted RBP22.7■■□□□ 1.22
USP11-205ENST00000467378 STK11IPQ8N1F8 1099 aa22.7■■□□□ 1.22
USP11-205ENST00000467378 FAM161BQ96MY7 647 aa22.7■■□□□ 1.22
USP11-205ENST00000467378 GINM1Q9NU53 330 aa22.7■■□□□ 1.22
USP11-205ENST00000467378 OGDHLQ9ULD0 1010 aa22.7■■□□□ 1.22
USP11-205ENST00000467378 LOC285556D6RIA3 1793 aa22.7■■□□□ 1.22
USP11-205ENST00000467378 MDM2Q00987 491 aaPredicted RBP22.69■■□□□ 1.22
USP11-205ENST00000467378 CTDSPL2Q05D32 466 aa22.69■■□□□ 1.22
USP11-205ENST00000467378 GUCD1Q96NT3 240 aa22.69■■□□□ 1.22
USP11-205ENST00000467378 TACC3Q9Y6A5 838 aa22.69■■□□□ 1.22
USP11-205ENST00000467378 GREB1LQ9C091 1923 aaPredicted RBP22.69■■□□□ 1.22
USP11-205ENST00000467378 PFASO15067 1338 aa22.68■■□□□ 1.22
USP11-205ENST00000467378 ASNSP08243 561 aa22.68■■□□□ 1.22
USP11-205ENST00000467378 ABCB5Q2M3G0 1257 aa22.68■■□□□ 1.22
USP11-205ENST00000467378 CASC1Q6TDU7 716 aa22.68■■□□□ 1.22
USP11-205ENST00000467378 GJD2Q9UKL4 321 aa22.68■■□□□ 1.22
USP11-205ENST00000467378 ZBTB21Q9ULJ3 1066 aa22.68■■□□□ 1.22
USP11-205ENST00000467378 GH2P01242 217 aa22.67■■□□□ 1.22
USP11-205ENST00000467378 RASA1P20936 1047 aa22.67■■□□□ 1.22
USP11-205ENST00000467378 GCLCP48506 637 aaPredicted RBP22.67■■□□□ 1.22
USP11-205ENST00000467378 FAM109BQ6ICB4 259 aaPredicted RBP22.67■■□□□ 1.22
USP11-205ENST00000467378 MAP4K1Q92918 833 aa22.67■■□□□ 1.22
USP11-205ENST00000467378 CCDC17Q96LX7 622 aa22.67■■□□□ 1.22
USP11-205ENST00000467378 USP17L5A8MUK1 530 aa22.66■■□□□ 1.22
USP11-205ENST00000467378 POTEB2H3BUK9 544 aa22.66■■□□□ 1.22
USP11-205ENST00000467378 SLC3A2P08195 630 aaKnown RBP22.66■■□□□ 1.22
USP11-205ENST00000467378 FGRP09769 529 aa22.66■■□□□ 1.22
USP11-205ENST00000467378 AKR1B1P15121 316 aa22.66■■□□□ 1.22
USP11-205ENST00000467378 GUCY1A2P33402 732 aa22.66■■□□□ 1.22
USP11-205ENST00000467378 PROCA1Q8NCQ7 364 aaPredicted RBP22.66■■□□□ 1.22
USP11-205ENST00000467378 TRIB2Q92519 343 aa22.66■■□□□ 1.22
USP11-205ENST00000467378 LSG1Q9H089 658 aaKnown RBP22.66■■□□□ 1.22
USP11-205ENST00000467378 MKNK2Q9HBH9 465 aa22.66■■□□□ 1.22
USP11-205ENST00000467378 CABP5Q9NP86 173 aa22.66■■□□□ 1.22
USP11-205ENST00000467378 INCENPQ9NQS7 918 aa22.66■■□□□ 1.22
USP11-205ENST00000467378 CTNNA3Q9UI47 895 aa22.66■■□□□ 1.22
USP11-205ENST00000467378 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.66■■□□□ 1.22
USP11-205ENST00000467378 ZNF213O14771 459 aa22.65■■□□□ 1.22
USP11-205ENST00000467378 CYP2B6P20813 491 aa22.65■■□□□ 1.22
USP11-205ENST00000467378 HAND2P61296 217 aa22.65■■□□□ 1.22
USP11-205ENST00000467378 PDE4BQ07343 736 aa22.65■■□□□ 1.22
USP11-205ENST00000467378 TBC1D2Q9BYX2 928 aa22.65■■□□□ 1.22
USP11-205ENST00000467378 ZNF287Q9HBT7 754 aa22.65■■□□□ 1.22
USP11-205ENST00000467378 FRMPD3Q5JV73 1810 aa22.65■■□□□ 1.22
USP11-205ENST00000467378 PRDM1O75626 825 aa22.64■■□□□ 1.21
USP11-205ENST00000467378 PRKAR2AP13861 404 aaKnown RBP22.64■■□□□ 1.21
USP11-205ENST00000467378 PABPC4Q13310 644 aaKnown RBP eCLIP22.64■■□□□ 1.21
USP11-205ENST00000467378 KIAA1211Q6ZU35 1233 aa22.64■■□□□ 1.21
USP11-205ENST00000467378 WDR18Q9BV38 432 aa22.64■■□□□ 1.21
USP11-205ENST00000467378 U3KPZ7 1027 aaPredicted RBP22.64■■□□□ 1.21
USP11-205ENST00000467378 MPHOSPH10O00566 681 aaKnown RBP22.63■■□□□ 1.21
USP11-205ENST00000467378 SEPT2Q15019 361 aa22.63■■□□□ 1.21
USP11-205ENST00000467378 IMMTQ16891 758 aaKnown RBP22.63■■□□□ 1.21
USP11-205ENST00000467378 LRRC26Q2I0M4 334 aa22.63■■□□□ 1.21
USP11-205ENST00000467378 TMEM179Q6ZVK1 233 aa22.63■■□□□ 1.21
USP11-205ENST00000467378 ZNF444Q8N0Y2 327 aaPredicted RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms