RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 VCPKMTQ9H867 229 aa19.39■□□□□ 0.69
CTDSPL-204ENST00000435525 ZSWIM6Q9HCJ5 1215 aa19.39■□□□□ 0.69
CTDSPL-204ENST00000435525 WDR33Q9C0J8 1336 aaKnown RBP19.39■□□□□ 0.69
CTDSPL-204ENST00000435525 FAM155AB1AL88 458 aaPredicted RBP19.38■□□□□ 0.69
CTDSPL-204ENST00000435525 GJA5P36382 358 aa19.38■□□□□ 0.69
CTDSPL-204ENST00000435525 HMGCS2P54868 508 aa19.38■□□□□ 0.69
CTDSPL-204ENST00000435525 DOCK1Q14185 1865 aa19.38■□□□□ 0.69
CTDSPL-204ENST00000435525 CHST3Q7LGC8 479 aa19.38■□□□□ 0.69
CTDSPL-204ENST00000435525 CATIPQ7Z7H3 387 aa19.38■□□□□ 0.69
CTDSPL-204ENST00000435525 CLEC10AQ8IUN9 316 aa19.38■□□□□ 0.69
CTDSPL-204ENST00000435525 ENAHQ8N8S7 591 aaPredicted RBP19.38■□□□□ 0.69
CTDSPL-204ENST00000435525 GMCL1P1Q8NEA9 526 aa19.38■□□□□ 0.69
CTDSPL-204ENST00000435525 TBC1D32Q96NH3 1257 aa19.38■□□□□ 0.69
CTDSPL-204ENST00000435525 PDRG1Q9NUG6 133 aa19.38■□□□□ 0.69
CTDSPL-204ENST00000435525 ISY1Q9ULR0 285 aaKnown RBP19.38■□□□□ 0.69
CTDSPL-204ENST00000435525 LIFRP42702 1097 aa19.37■□□□□ 0.69
CTDSPL-204ENST00000435525 NOVP48745 357 aa19.37■□□□□ 0.69
CTDSPL-204ENST00000435525 VEGFBP49765 207 aa19.37■□□□□ 0.69
CTDSPL-204ENST00000435525 HTRA3P83110 453 aa19.37■□□□□ 0.69
CTDSPL-204ENST00000435525 KIF23Q02241 960 aaPredicted RBP19.37■□□□□ 0.69
CTDSPL-204ENST00000435525 ANKRD1Q15327 319 aa19.37■□□□□ 0.69
CTDSPL-204ENST00000435525 LRRC47Q8N1G4 583 aaKnown RBP19.37■□□□□ 0.69
CTDSPL-204ENST00000435525 IL17RAQ96F46 866 aa19.37■□□□□ 0.69
CTDSPL-204ENST00000435525 C12orf42Q96LP6 360 aa19.37■□□□□ 0.69
CTDSPL-204ENST00000435525 TMEM47Q9BQJ4 181 aa19.37■□□□□ 0.69
CTDSPL-204ENST00000435525 A0A1W2PRG0 241 aa19.36■□□□□ 0.69
CTDSPL-204ENST00000435525 ANTXR2P58335 489 aa19.36■□□□□ 0.69
CTDSPL-204ENST00000435525 EXOSC10Q01780 885 aaKnown RBP19.36■□□□□ 0.69
CTDSPL-204ENST00000435525 RABEP1Q15276 862 aa19.36■□□□□ 0.69
CTDSPL-204ENST00000435525 SLFN13Q68D06 897 aa19.36■□□□□ 0.69
CTDSPL-204ENST00000435525 PNMA1Q8ND90 353 aa19.36■□□□□ 0.69
CTDSPL-204ENST00000435525 IGDCC4Q8TDY8 1250 aa19.36■□□□□ 0.69
CTDSPL-204ENST00000435525 PNMA3Q9UL41 463 aa19.36■□□□□ 0.69
CTDSPL-204ENST00000435525 F5H6K3 240 aa19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 SH2B2O14492 632 aaPredicted RBP19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 WDR46O15213 610 aaKnown RBP19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 ALDH1A1P00352 501 aa19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 CALM1P0DP23 149 aa19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 CALM2P0DP24 149 aa19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 CALM3P0DP25 149 aa19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 OSBPP22059 807 aa19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 SLC1A4P43007 532 aa19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 KLRC3Q07444 240 aa19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 SEC23AQ15436 765 aa19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 ANKRD23Q86SG2 305 aa19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 SIAH1Q8IUQ4 282 aa19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 DCAF4Q8WV16 495 aa19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 MS4A4AQ96JQ5 239 aa19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 UPF3BQ9BZI7 483 aaKnown RBP19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 ZCCHC17Q9NP64 241 aaKnown RBP19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 AGTPBP1Q9UPW5 1226 aa19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 SLC12A7Q9Y666 1083 aa19.35■□□□□ 0.69
CTDSPL-204ENST00000435525 TESPA1A2RU30 521 aaPredicted RBP19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 USP17L15C9J2P7 530 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 USP17L13C9JLJ4 530 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 USP17L11C9JVI0 530 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 USP17L18D6R9N7 530 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 USP17L22D6RA61 530 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 USP17L17D6RBQ6 530 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 USP17L19D6RCP7 530 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 USP17L20D6RJB6 530 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 NEK4P51957 841 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 IRX3P78415 501 aaPredicted RBP19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 USP17L24Q0WX57 530 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 CCDC96Q2M329 555 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 RCSD1Q6JBY9 416 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 Q6ZUG5 572 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 GMCL1Q96IK5 515 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 BEGAINQ9BUH8 593 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 LY9Q9HBG7 655 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 EMILIN3Q9NT22 766 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 NAP1L2Q9ULW6 460 aaPredicted RBP19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 MTMR7Q9Y216 660 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 SLC45A1Q9Y2W3 748 aa19.34■□□□□ 0.69
CTDSPL-204ENST00000435525 OTOFQ9HC10 1997 aa19.33■□□□□ 0.69
CTDSPL-204ENST00000435525 ST18O60284 1047 aa19.33■□□□□ 0.68
CTDSPL-204ENST00000435525 AOC2O75106 756 aa19.33■□□□□ 0.68
CTDSPL-204ENST00000435525 DDAH1O94760 285 aa19.33■□□□□ 0.68
CTDSPL-204ENST00000435525 NDUFB10O96000 172 aa19.33■□□□□ 0.68
CTDSPL-204ENST00000435525 TM4SF4P48230 202 aa19.33■□□□□ 0.68
CTDSPL-204ENST00000435525 SGMS1Q86VZ5 419 aa19.33■□□□□ 0.68
CTDSPL-204ENST00000435525 SPICE1Q8N0Z3 855 aa19.33■□□□□ 0.68
CTDSPL-204ENST00000435525 FBXL16Q8N461 479 aa19.33■□□□□ 0.68
CTDSPL-204ENST00000435525 BRI3BPQ8WY22 251 aa19.33■□□□□ 0.68
CTDSPL-204ENST00000435525 LRRC2Q9BYS8 371 aa19.33■□□□□ 0.68
CTDSPL-204ENST00000435525 TANGO6Q9C0B7 1094 aa19.33■□□□□ 0.68
CTDSPL-204ENST00000435525 MYH8P13535 1937 aa19.33■□□□□ 0.68
CTDSPL-204ENST00000435525 BMP3P12645 472 aa19.32■□□□□ 0.68
CTDSPL-204ENST00000435525 CPA1P15085 419 aa19.32■□□□□ 0.68
CTDSPL-204ENST00000435525 VCAM1P19320 739 aa19.32■□□□□ 0.68
CTDSPL-204ENST00000435525 KIF5BP33176 963 aa19.32■□□□□ 0.68
CTDSPL-204ENST00000435525 MAP2K1Q02750 393 aaPredicted RBP19.32■□□□□ 0.68
CTDSPL-204ENST00000435525 IKQ13123 557 aaPredicted RBP19.32■□□□□ 0.68
CTDSPL-204ENST00000435525 GPATCH4Q5T3I0 446 aaKnown RBP19.32■□□□□ 0.68
CTDSPL-204ENST00000435525 CTCFLQ8NI51 663 aaPredicted RBP19.32■□□□□ 0.68
CTDSPL-204ENST00000435525 NKX2-3Q8TAU0 364 aa19.32■□□□□ 0.68
CTDSPL-204ENST00000435525 CHURC1Q8WUH1 139 aa19.32■□□□□ 0.68
CTDSPL-204ENST00000435525 BRF1Q92994 677 aa19.32■□□□□ 0.68
CTDSPL-204ENST00000435525 TCEANC2Q96MN5 208 aa19.32■□□□□ 0.68
CTDSPL-204ENST00000435525 ALDH8A1Q9H2A2 487 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms