RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 U2AF1L4Q8WU68 220 aaKnown RBP15.25■□□□□ 0.03
VAPA-202ENST00000400000 ANGEL1Q9UNK9 670 aaKnown RBP15.25■□□□□ 0.03
VAPA-202ENST00000400000 EIF4G3O43432 1585 aaKnown RBP15.25■□□□□ 0.03
VAPA-202ENST00000400000 SMCO2A6NFE2 343 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 GAS7O60861 476 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 IFNB1P01574 187 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 FANCCQ00597 558 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 USP19O94966 1318 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 KRT15P19012 456 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 EEPD1Q7L9B9 569 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 NLRX1Q86UT6 975 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 ARHGAP45Q92619 1136 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 STK38LQ9Y2H1 464 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 RIOK3O14730 519 aaKnown RBP15.24■□□□□ 0.03
VAPA-202ENST00000400000 PDE1CQ14123 709 aaPredicted RBP15.24■□□□□ 0.03
VAPA-202ENST00000400000 CYP26C1Q6V0L0 522 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 NAPGQ99747 312 aaPredicted RBP15.24■□□□□ 0.03
VAPA-202ENST00000400000 ABT1Q9ULW3 272 aaKnown RBP15.24■□□□□ 0.03
VAPA-202ENST00000400000 STK25O00506 426 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 NEDD9Q14511 834 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 DCTPP1Q9H773 170 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 QTRT2Q9H974 415 aaKnown RBP15.24■□□□□ 0.03
VAPA-202ENST00000400000 A0A1W2PP64 1363 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 SLC52A2Q9HAB3 445 aa15.24■□□□□ 0.03
VAPA-202ENST00000400000 KCNQ3O43525 872 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 ANKRD35Q8N283 1001 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 ZNF202O95125 648 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 POLA2Q14181 598 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 FYB2Q5VWT5 728 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 SCYL1Q96KG9 808 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 DDX21Q9NR30 783 aaKnown RBP eCLIP15.23■□□□□ 0.03
VAPA-202ENST00000400000 SARNPP82979 210 aaKnown RBP15.23■□□□□ 0.03
VAPA-202ENST00000400000 NONOQ15233 471 aaKnown RBP eCLIP15.23■□□□□ 0.032e-7■■□□□ 12.8
VAPA-202ENST00000400000 HHATQ5VTY9 493 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 WDR66Q8TBY9 1149 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 SPC25Q9HBM1 224 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 KDRP35968 1356 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 ZBTB24O43167 697 aaPredicted RBP15.23■□□□□ 0.03
VAPA-202ENST00000400000 CAVIN2O95810 425 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 ATF7P17544 494 aaPredicted RBP15.23■□□□□ 0.03
VAPA-202ENST00000400000 KLHL30Q0D2K2 578 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 RYBPQ8N488 228 aaPredicted RBP15.23■□□□□ 0.03
VAPA-202ENST00000400000 RBSNQ9H1K0 784 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 NKX1-1Q15270 411 aaPredicted RBP15.23■□□□□ 0.03
VAPA-202ENST00000400000 NOX5Q96PH1 765 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 IL1RL1Q01638 556 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 GPBP1Q86WP2 473 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 NME8Q8N427 588 aa15.23■□□□□ 0.03
VAPA-202ENST00000400000 CASP2P42575 452 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 SULF1Q8IWU6 871 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 SECISBP2LQ93073 1101 aaKnown RBP15.22■□□□□ 0.03
VAPA-202ENST00000400000 SMYD2Q9NRG4 433 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 XKR9Q5GH70 373 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 POMGNT1Q8WZA1 660 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 CSRNP2Q9H175 543 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 ZMYM3Q14202 1370 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 TTC31Q49AM3 519 aaPredicted RBP15.22■□□□□ 0.03
VAPA-202ENST00000400000 RSAD2Q8WXG1 361 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 PGBD1Q96JS3 809 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 FAM114A2Q9NRY5 505 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 ALDH1B1P30837 517 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 HDXQ7Z353 690 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 APPBP2Q92624 585 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 CCDC127Q96BQ5 260 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 DBNDD1Q9H9R9 158 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 IRAK4Q9NWZ3 460 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 SERTAD1Q9UHV2 236 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 A2MP01023 1474 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 SNAP25P60880 206 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 CARD14Q9BXL6 1004 aa15.22■□□□□ 0.03
VAPA-202ENST00000400000 USP17L12C9JPN9 530 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 USP17L21D6R901 530 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 IVLP07476 585 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 CYP4A11Q02928 519 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 METTL14Q9HCE5 456 aaKnown RBP15.21■□□□□ 0.03
VAPA-202ENST00000400000 K7ENM7 598 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 LIG4P49917 911 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 SLC12A2P55011 1212 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 POSTNQ15063 836 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 LONRF2Q1L5Z9 754 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 PARD3BQ8TEW8 1205 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 NAP1L4Q99733 375 aaKnown RBP15.21■□□□□ 0.03
VAPA-202ENST00000400000 FLOT1O75955 427 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 RSPH3Q86UC2 560 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 PRPF31Q8WWY3 499 aaKnown RBP15.21■□□□□ 0.03
VAPA-202ENST00000400000 CBX8Q9HC52 389 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 SLC12A1Q13621 1099 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 PARP10Q53GL7 1025 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 TMTC4Q5T4D3 741 aa15.21■□□□□ 0.03
VAPA-202ENST00000400000 ATP11AP98196 1134 aa15.21■□□□□ 0.02
VAPA-202ENST00000400000 LRRIQ4A6NIV6 560 aa15.2■□□□□ 0.02
VAPA-202ENST00000400000 PCK1P35558 622 aa15.2■□□□□ 0.02
VAPA-202ENST00000400000 LACTBP83111 547 aaPredicted RBP15.2■□□□□ 0.02
VAPA-202ENST00000400000 NAA35Q5VZE5 725 aa15.2■□□□□ 0.02
VAPA-202ENST00000400000 TEKT1Q969V4 418 aa15.2■□□□□ 0.02
VAPA-202ENST00000400000 NBPF3Q9H094 633 aa15.2■□□□□ 0.02
VAPA-202ENST00000400000 ZKSCAN5Q9Y2L8 839 aa15.2■□□□□ 0.02
VAPA-202ENST00000400000 PPFIA1Q13136 1202 aa15.2■□□□□ 0.02
VAPA-202ENST00000400000 AFAP1L1Q8TED9 768 aa15.2■□□□□ 0.02
VAPA-202ENST00000400000 SLAIN2Q9P270 581 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms