RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 RPAP3Q9H6T3 665 aaPredicted RBP14.9□□□□□ -0.02
CTSC-202ENST00000393301 BTBD7Q9P203 1132 aa14.9□□□□□ -0.02
CTSC-202ENST00000393301 PFASO15067 1338 aa14.9□□□□□ -0.02
CTSC-202ENST00000393301 C12orf60Q5U649 245 aa14.89□□□□□ -0.03
CTSC-202ENST00000393301 C16orf86Q6ZW13 317 aa14.89□□□□□ -0.03
CTSC-202ENST00000393301 SIAH1Q8IUQ4 282 aa14.89□□□□□ -0.03
CTSC-202ENST00000393301 LRRCC1Q9C099 1032 aa14.89□□□□□ -0.03
CTSC-202ENST00000393301 BOLA2Q9H3K6 86 aa14.89□□□□□ -0.03
CTSC-202ENST00000393301 C11orf49Q9H6J7 331 aa14.89□□□□□ -0.03
CTSC-202ENST00000393301 HOXC10Q9NYD6 342 aa14.89□□□□□ -0.03
CTSC-202ENST00000393301 TMX2Q9Y320 296 aa14.89□□□□□ -0.03
CTSC-202ENST00000393301 COL6A3P12111 3177 aa14.89□□□□□ -0.03
CTSC-202ENST00000393301 ZNFX1Q9P2E3 1918 aaKnown RBP14.88□□□□□ -0.03
CTSC-202ENST00000393301 COL11A1P12107 1806 aaPredicted RBP14.88□□□□□ -0.03
CTSC-202ENST00000393301 STRNO43815 780 aa14.88□□□□□ -0.03
CTSC-202ENST00000393301 MSCO60682 206 aa14.88□□□□□ -0.03
CTSC-202ENST00000393301 MBD4O95243 580 aa14.88□□□□□ -0.03
CTSC-202ENST00000393301 COG2Q14746 738 aa14.88□□□□□ -0.03
CTSC-202ENST00000393301 ZYXQ15942 572 aaKnown RBP14.88□□□□□ -0.03
CTSC-202ENST00000393301 CCL14Q16627 93 aa14.88□□□□□ -0.03
CTSC-202ENST00000393301 ABRAQ8N0Z2 381 aa14.88□□□□□ -0.03
CTSC-202ENST00000393301 SH2D4AQ9H788 454 aa14.88□□□□□ -0.03
CTSC-202ENST00000393301 ARMT1Q9H993 441 aa14.88□□□□□ -0.03
CTSC-202ENST00000393301 ROBO3Q96MS0 1386 aa14.87□□□□□ -0.03
CTSC-202ENST00000393301 LAMA2P24043 3122 aaKnown RBP14.87□□□□□ -0.03
CTSC-202ENST00000393301 CYP2D6P10635 497 aa14.87□□□□□ -0.03
CTSC-202ENST00000393301 OLFML2BQ68BL8 750 aa14.87□□□□□ -0.03
CTSC-202ENST00000393301 ZSCAN25Q6NSZ9 544 aa14.87□□□□□ -0.03
CTSC-202ENST00000393301 GIMAP6Q6P9H5 292 aa14.87□□□□□ -0.03
CTSC-202ENST00000393301 CCAR1Q8IX12 1150 aaKnown RBP14.87□□□□□ -0.03
CTSC-202ENST00000393301 SLC44A5Q8NCS7 719 aa14.87□□□□□ -0.03
CTSC-202ENST00000393301 SPATC1LQ9H0A9 340 aa14.87□□□□□ -0.03
CTSC-202ENST00000393301 VCPKMTQ9H867 229 aa14.87□□□□□ -0.03
CTSC-202ENST00000393301 ADAMTS5Q9UNA0 930 aa14.87□□□□□ -0.03
CTSC-202ENST00000393301 SUPT16HQ9Y5B9 1047 aaKnown RBP14.87□□□□□ -0.03
CTSC-202ENST00000393301 APBB1O00213 710 aa14.86□□□□□ -0.03
CTSC-202ENST00000393301 WDR46O15213 610 aaKnown RBP14.86□□□□□ -0.03
CTSC-202ENST00000393301 PRKAB2O43741 272 aa14.86□□□□□ -0.03
CTSC-202ENST00000393301 AKR1B1P15121 316 aa14.86□□□□□ -0.03
CTSC-202ENST00000393301 CCND3P30281 292 aaPredicted RBP14.86□□□□□ -0.03
CTSC-202ENST00000393301 DSG3P32926 999 aa14.86□□□□□ -0.03
CTSC-202ENST00000393301 HDAC1Q13547 482 aaPredicted RBP14.86□□□□□ -0.03
CTSC-202ENST00000393301 SBK1Q52WX2 424 aa14.86□□□□□ -0.03
CTSC-202ENST00000393301 KIAA1755Q5JYT7 1200 aa14.86□□□□□ -0.03
CTSC-202ENST00000393301 MFSD14CQ5VZR4 134 aa14.86□□□□□ -0.03
CTSC-202ENST00000393301 GPR153Q6NV75 609 aa14.86□□□□□ -0.03
CTSC-202ENST00000393301 MOV10L1Q9BXT6 1211 aaKnown RBP14.86□□□□□ -0.03
CTSC-202ENST00000393301 DCTPP1Q9H773 170 aa14.86□□□□□ -0.03
CTSC-202ENST00000393301 ARHGEF10LQ9HCE6 1279 aa14.86□□□□□ -0.03
CTSC-202ENST00000393301 FLRT1Q9NZU1 646 aa14.86□□□□□ -0.03
CTSC-202ENST00000393301 IVNS1ABPQ9Y6Y0 642 aa14.86□□□□□ -0.03
CTSC-202ENST00000393301 CYBAP13498 195 aa14.85□□□□□ -0.03
CTSC-202ENST00000393301 CDK8P49336 464 aa14.85□□□□□ -0.03
CTSC-202ENST00000393301 ICA1Q05084 483 aa14.85□□□□□ -0.03
CTSC-202ENST00000393301 NPLOC4Q8TAT6 608 aa14.85□□□□□ -0.03
CTSC-202ENST00000393301 DYNLL2Q96FJ2 89 aa14.85□□□□□ -0.03
CTSC-202ENST00000393301 PUS7LQ9H0K6 701 aaKnown RBP14.85□□□□□ -0.03
CTSC-202ENST00000393301 ECHDC1Q9NTX5 307 aa14.85□□□□□ -0.03
CTSC-202ENST00000393301 ARPP21Q9UBL0 812 aaPredicted RBP14.85□□□□□ -0.03
CTSC-202ENST00000393301 PLXNA1Q9UIW2 1896 aa14.84□□□□□ -0.03
CTSC-202ENST00000393301 USP17L12C9JPN9 530 aa14.84□□□□□ -0.03
CTSC-202ENST00000393301 USP17L21D6R901 530 aa14.84□□□□□ -0.03
CTSC-202ENST00000393301 MPHOSPH10O00566 681 aaKnown RBP14.84□□□□□ -0.03
CTSC-202ENST00000393301 CENPBP07199 599 aaPredicted RBP14.84□□□□□ -0.03
CTSC-202ENST00000393301 SLFNL1Q499Z3 407 aa14.84□□□□□ -0.03
CTSC-202ENST00000393301 CTR9Q6PD62 1173 aa14.84□□□□□ -0.03
CTSC-202ENST00000393301 AMOTL1Q8IY63 956 aa14.84□□□□□ -0.03
CTSC-202ENST00000393301 KBTBD3Q8NAB2 608 aa14.84□□□□□ -0.03
CTSC-202ENST00000393301 STRBPQ96SI9 672 aaKnown RBP14.84□□□□□ -0.03
CTSC-202ENST00000393301 MROH8Q9H579 483 aa14.84□□□□□ -0.03
CTSC-202ENST00000393301 KANSL2Q9H9L4 492 aa14.84□□□□□ -0.03
CTSC-202ENST00000393301 DDX20Q9UHI6 824 aaKnown RBP14.84□□□□□ -0.03
CTSC-202ENST00000393301 CHGBP05060 677 aa14.83□□□□□ -0.04
CTSC-202ENST00000393301 ADORA2AP29274 412 aa14.83□□□□□ -0.04
CTSC-202ENST00000393301 LRIT3Q3SXY7 679 aa14.83□□□□□ -0.04
CTSC-202ENST00000393301 C7orf61Q8IZ16 206 aa14.83□□□□□ -0.04
CTSC-202ENST00000393301 DDRGK1Q96HY6 314 aa14.83□□□□□ -0.04
CTSC-202ENST00000393301 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.83□□□□□ -0.04
CTSC-202ENST00000393301 CWC22Q9HCG8 908 aaKnown RBP14.83□□□□□ -0.04
CTSC-202ENST00000393301 NRBP1Q9UHY1 535 aa14.83□□□□□ -0.04
CTSC-202ENST00000393301 SYNPO2Q9UMS6 1093 aa14.83□□□□□ -0.04
CTSC-202ENST00000393301 MYH4Q9Y623 1939 aa14.83□□□□□ -0.04
CTSC-202ENST00000393301 LTBP2Q14767 1821 aa14.82□□□□□ -0.04
CTSC-202ENST00000393301 SMIM22K7EJ46 135 aa14.82□□□□□ -0.04
CTSC-202ENST00000393301 DNM1LO00429 736 aa14.82□□□□□ -0.04
CTSC-202ENST00000393301 SLC25A27O95847 323 aa14.82□□□□□ -0.04
CTSC-202ENST00000393301 ZFYP08048 801 aaPredicted RBP14.82□□□□□ -0.04
CTSC-202ENST00000393301 ERCC3P19447 782 aa14.82□□□□□ -0.04
CTSC-202ENST00000393301 ATP2B2Q01814 1243 aa14.82□□□□□ -0.04
CTSC-202ENST00000393301 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.82□□□□□ -0.04
CTSC-202ENST00000393301 TRPV1Q8NER1 839 aa14.82□□□□□ -0.04
CTSC-202ENST00000393301 REPS2Q8NFH8 660 aa14.82□□□□□ -0.04
CTSC-202ENST00000393301 APPBP2Q92624 585 aa14.82□□□□□ -0.04
CTSC-202ENST00000393301 ATG4CQ96DT6 458 aa14.82□□□□□ -0.04
CTSC-202ENST00000393301 CRBNQ96SW2 442 aa14.82□□□□□ -0.04
CTSC-202ENST00000393301 TANGO6Q9C0B7 1094 aa14.82□□□□□ -0.04
CTSC-202ENST00000393301 STAP2Q9UGK3 403 aa14.82□□□□□ -0.04
CTSC-202ENST00000393301 SLC4A4Q9Y6R1 1079 aa14.82□□□□□ -0.04
CTSC-202ENST00000393301 A0A0C4DFX4 3053 aa14.82□□□□□ -0.04
CTSC-202ENST00000393301 SMCHD1A6NHR9 2005 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms