RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 BRCA1P38398 1863 aaKnown RBP24.76■■□□□ 1.55
GMDS-202ENST00000380815 MYH8P13535 1937 aa24.76■■□□□ 1.55
GMDS-202ENST00000380815 ENTPD3O75355 529 aa24.76■■□□□ 1.55
GMDS-202ENST00000380815 CCDC17Q96LX7 622 aa24.76■■□□□ 1.55
GMDS-202ENST00000380815 CLSTN2Q9H4D0 955 aa24.76■■□□□ 1.55
GMDS-202ENST00000380815 TDRD3Q9H7E2 651 aaKnown RBP24.76■■□□□ 1.55
GMDS-202ENST00000380815 HDAC9Q9UKV0 1011 aa24.76■■□□□ 1.55
GMDS-202ENST00000380815 PPP6R2O75170 966 aa24.75■■□□□ 1.55
GMDS-202ENST00000380815 KRT2P35908 639 aa24.75■■□□□ 1.55
GMDS-202ENST00000380815 NR5A1Q13285 461 aa24.75■■□□□ 1.55
GMDS-202ENST00000380815 PTPAQ15257 358 aa24.75■■□□□ 1.55
GMDS-202ENST00000380815 CCDC73Q6ZRK6 1079 aa24.75■■□□□ 1.55
GMDS-202ENST00000380815 OXER1Q8TDS5 423 aa24.75■■□□□ 1.55
GMDS-202ENST00000380815 PANK2Q9BZ23 570 aa24.75■■□□□ 1.55
GMDS-202ENST00000380815 TAOK3Q9H2K8 898 aa24.75■■□□□ 1.55
GMDS-202ENST00000380815 DDTLA6NHG4 134 aaPredicted RBP24.75■■□□□ 1.55
GMDS-202ENST00000380815 PARP1P09874 1014 aaKnown RBP24.75■■□□□ 1.55
GMDS-202ENST00000380815 OGFOD1Q8N543 542 aa24.75■■□□□ 1.55
GMDS-202ENST00000380815 JMYQ8N9B5 988 aa24.75■■□□□ 1.55
GMDS-202ENST00000380815 BRMS1Q9HCU9 246 aa24.75■■□□□ 1.55
GMDS-202ENST00000380815 ATRNL1Q5VV63 1379 aa24.74■■□□□ 1.55
GMDS-202ENST00000380815 COL2A1P02458 1487 aaPredicted RBP24.74■■□□□ 1.55
GMDS-202ENST00000380815 SPDYE2BA6NHP3 402 aa24.74■■□□□ 1.55
GMDS-202ENST00000380815 SPDYE6P0CI01 402 aa24.74■■□□□ 1.55
GMDS-202ENST00000380815 SMARCA1P28370 1054 aa24.74■■□□□ 1.55
GMDS-202ENST00000380815 FAM160A1Q05DH4 1040 aa24.74■■□□□ 1.55
GMDS-202ENST00000380815 MAP3K11Q16584 847 aa24.74■■□□□ 1.55
GMDS-202ENST00000380815 PPP4R3BQ5MIZ7 849 aa24.74■■□□□ 1.55
GMDS-202ENST00000380815 SH3BP5LQ7L8J4 393 aa24.74■■□□□ 1.55
GMDS-202ENST00000380815 FOXP4Q8IVH2 680 aaPredicted RBP24.74■■□□□ 1.55
GMDS-202ENST00000380815 AGBL3Q8NEM8 1001 aa24.74■■□□□ 1.55
GMDS-202ENST00000380815 MRPS27Q92552 414 aaKnown RBP24.74■■□□□ 1.55
GMDS-202ENST00000380815 TNMDQ9H2S6 317 aa24.74■■□□□ 1.55
GMDS-202ENST00000380815 GOLPH3LQ9H4A5 285 aa24.74■■□□□ 1.55
GMDS-202ENST00000380815 DNAJC18Q9H819 358 aa24.74■■□□□ 1.55
GMDS-202ENST00000380815 SH3GLB2Q9NR46 395 aa24.74■■□□□ 1.55
GMDS-202ENST00000380815 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.74■■□□□ 1.55
GMDS-202ENST00000380815 GOLGB1Q14789 3259 aaKnown RBP24.74■■□□□ 1.55
GMDS-202ENST00000380815 TTLL1O95922 423 aa24.73■■□□□ 1.55
GMDS-202ENST00000380815 TOB1P50616 345 aaPredicted RBP24.73■■□□□ 1.55
GMDS-202ENST00000380815 RBM43Q6ZSC3 357 aaKnown RBP24.73■■□□□ 1.55
GMDS-202ENST00000380815 ZSCAN29Q8IWY8 852 aaPredicted RBP24.73■■□□□ 1.55
GMDS-202ENST00000380815 FSIP1Q8NA03 581 aa24.73■■□□□ 1.55
GMDS-202ENST00000380815 ENGASEQ8NFI3 743 aa24.73■■□□□ 1.55
GMDS-202ENST00000380815 FUCA2Q9BTY2 467 aa24.73■■□□□ 1.55
GMDS-202ENST00000380815 SPZ1Q9BXG8 430 aa24.73■■□□□ 1.55
GMDS-202ENST00000380815 PPP1R1BQ9UD71 204 aaPredicted RBP24.73■■□□□ 1.55
GMDS-202ENST00000380815 FER1L6Q2WGJ9 1857 aa24.73■■□□□ 1.55
GMDS-202ENST00000380815 SIPA1L1O43166 1804 aa24.73■■□□□ 1.55
GMDS-202ENST00000380815 KLRF2D3W0D1 207 aa24.72■■□□□ 1.55
GMDS-202ENST00000380815 SNW1Q13573 536 aaKnown RBP24.72■■□□□ 1.55
GMDS-202ENST00000380815 NPY5RQ15761 445 aa24.72■■□□□ 1.55
GMDS-202ENST00000380815 AXDND1Q5T1B0 1012 aaPredicted RBP24.72■■□□□ 1.55
GMDS-202ENST00000380815 METTL16Q86W50 562 aaKnown RBP24.72■■□□□ 1.55
GMDS-202ENST00000380815 CYTH3O43739 400 aa24.72■■□□□ 1.55
GMDS-202ENST00000380815 CAMK4Q16566 473 aa24.72■■□□□ 1.55
GMDS-202ENST00000380815 SLC35G1Q2M3R5 365 aa24.72■■□□□ 1.55
GMDS-202ENST00000380815 UPF1Q92900 1129 aaKnown RBP eCLIP24.72■■□□□ 1.553e-10■■■■■ 36
GMDS-202ENST00000380815 MTMR7Q9Y216 660 aa24.72■■□□□ 1.55
GMDS-202ENST00000380815 GREB1LQ9C091 1923 aaPredicted RBP24.72■■□□□ 1.55
GMDS-202ENST00000380815 BAZ2BQ9UIF8 2168 aaKnown RBP24.71■■□□□ 1.55
GMDS-202ENST00000380815 DLGAP5Q15398 846 aa24.71■■□□□ 1.55
GMDS-202ENST00000380815 TATDN1Q6P1N9 297 aa24.71■■□□□ 1.55
GMDS-202ENST00000380815 FAM177A1Q8N128 213 aaPredicted RBP24.71■■□□□ 1.55
GMDS-202ENST00000380815 TMOD2Q9NZR1 351 aa24.71■■□□□ 1.55
GMDS-202ENST00000380815 CMA1P23946 247 aa24.7■■□□□ 1.55
GMDS-202ENST00000380815 USP17L2Q6R6M4 530 aa24.7■■□□□ 1.55
GMDS-202ENST00000380815 PIBF1Q8WXW3 757 aa24.7■■□□□ 1.55
GMDS-202ENST00000380815 JDP2Q8WYK2 163 aa24.7■■□□□ 1.55
GMDS-202ENST00000380815 TNFRSF25Q93038 417 aa24.7■■□□□ 1.55
GMDS-202ENST00000380815 TRIM34Q9BYJ4 488 aa24.7■■□□□ 1.55
GMDS-202ENST00000380815 CABP5Q9NP86 173 aa24.7■■□□□ 1.55
GMDS-202ENST00000380815 ZBTB12Q9Y330 459 aaPredicted RBP24.7■■□□□ 1.55
GMDS-202ENST00000380815 GOLGA8HP0CJ92 632 aa24.7■■□□□ 1.54
GMDS-202ENST00000380815 SNHG28P0DPA3 235 aa24.7■■□□□ 1.54
GMDS-202ENST00000380815 PDHBP11177 359 aa24.7■■□□□ 1.54
GMDS-202ENST00000380815 VEGFAP15692 232 aaPredicted RBP24.7■■□□□ 1.54
GMDS-202ENST00000380815 CALML3P27482 149 aa24.7■■□□□ 1.54
GMDS-202ENST00000380815 NLRP5P59047 1200 aa24.7■■□□□ 1.54
GMDS-202ENST00000380815 CXCL9Q07325 125 aa24.7■■□□□ 1.54
GMDS-202ENST00000380815 MTMR14Q8NCE2 650 aa24.7■■□□□ 1.54
GMDS-202ENST00000380815 CLIP2Q9UDT6 1046 aa24.7■■□□□ 1.54
GMDS-202ENST00000380815 MPHOSPH10O00566 681 aaKnown RBP24.69■■□□□ 1.54
GMDS-202ENST00000380815 CTAGE5O15320 804 aa24.69■■□□□ 1.54
GMDS-202ENST00000380815 KINO60870 393 aaKnown RBP24.69■■□□□ 1.54
GMDS-202ENST00000380815 MARCKSP29966 332 aaPredicted RBP24.69■■□□□ 1.54
GMDS-202ENST00000380815 PTGER2P43116 358 aa24.69■■□□□ 1.54
GMDS-202ENST00000380815 CERKLQ49MI3 558 aaPredicted RBP24.69■■□□□ 1.54
GMDS-202ENST00000380815 FMR1NBQ8N0W7 255 aaPredicted RBP24.69■■□□□ 1.54
GMDS-202ENST00000380815 USP17L5A8MUK1 530 aa24.68■■□□□ 1.54
GMDS-202ENST00000380815 NFKBIEO00221 500 aa24.68■■□□□ 1.54
GMDS-202ENST00000380815 CCDC192P0DO97 292 aa24.68■■□□□ 1.54
GMDS-202ENST00000380815 ASPRV1Q53RT3 343 aa24.68■■□□□ 1.54
GMDS-202ENST00000380815 RASGRP2Q7LDG7 609 aa24.67■■□□□ 1.54
GMDS-202ENST00000380815 LRRC47Q8N1G4 583 aaKnown RBP24.67■■□□□ 1.54
GMDS-202ENST00000380815 ZNF70Q9UC06 446 aaPredicted RBP24.67■■□□□ 1.54
GMDS-202ENST00000380815 CEP131Q9UPN4 1083 aa24.67■■□□□ 1.54
GMDS-202ENST00000380815 MORC2Q9Y6X9 1032 aaPredicted RBP24.67■■□□□ 1.54
GMDS-202ENST00000380815 LTBP3Q9NS15 1303 aa24.67■■□□□ 1.54
GMDS-202ENST00000380815 A0A1B0GVL5 298 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms