RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 ATP5JP18859 108 aa21.1■□□□□ 0.97
HLA-A-201ENST00000376802 ADD2P35612 726 aa21.1■□□□□ 0.97
HLA-A-201ENST00000376802 DYNLL2Q96FJ2 89 aa21.1■□□□□ 0.97
HLA-A-201ENST00000376802 BCL11AQ9H165 835 aa21.1■□□□□ 0.97
HLA-A-201ENST00000376802 BOLA2Q9H3K6 86 aa21.1■□□□□ 0.97
HLA-A-201ENST00000376802 MPHOSPH10O00566 681 aaKnown RBP21.09■□□□□ 0.97
HLA-A-201ENST00000376802 GLRX3O76003 335 aaKnown RBP21.09■□□□□ 0.97
HLA-A-201ENST00000376802 CHGBP05060 677 aa21.09■□□□□ 0.97
HLA-A-201ENST00000376802 SYN1P17600 705 aa21.09■□□□□ 0.97
HLA-A-201ENST00000376802 GRB14Q14449 540 aa21.09■□□□□ 0.97
HLA-A-201ENST00000376802 WDR78Q5VTH9 848 aa21.09■□□□□ 0.97
HLA-A-201ENST00000376802 CWC22Q9HCG8 908 aaKnown RBP21.09■□□□□ 0.97
HLA-A-201ENST00000376802 COG2Q14746 738 aa21.08■□□□□ 0.97
HLA-A-201ENST00000376802 TMEM179Q6ZVK1 233 aa21.08■□□□□ 0.97
HLA-A-201ENST00000376802 NPLOC4Q8TAT6 608 aa21.08■□□□□ 0.97
HLA-A-201ENST00000376802 LRCH3Q96II8 777 aa21.08■□□□□ 0.97
HLA-A-201ENST00000376802 HAUS7Q99871 368 aa21.08■□□□□ 0.97
HLA-A-201ENST00000376802 HOXC10Q9NYD6 342 aa21.08■□□□□ 0.97
HLA-A-201ENST00000376802 SWAP70Q9UH65 585 aa21.08■□□□□ 0.97
HLA-A-201ENST00000376802 ZNF236Q9UL36 1845 aa21.08■□□□□ 0.97
HLA-A-201ENST00000376802 COL6A3P12111 3177 aa21.08■□□□□ 0.97
HLA-A-201ENST00000376802 MBD4O95243 580 aa21.07■□□□□ 0.96
HLA-A-201ENST00000376802 CLEC10AQ8IUN9 316 aa21.07■□□□□ 0.96
HLA-A-201ENST00000376802 MOV10L1Q9BXT6 1211 aaKnown RBP21.07■□□□□ 0.96
HLA-A-201ENST00000376802 ATP8A2Q9NTI2 1148 aa21.07■□□□□ 0.96
HLA-A-201ENST00000376802 ZNFX1Q9P2E3 1918 aaKnown RBP21.07■□□□□ 0.96
HLA-A-201ENST00000376802 CYP2D7A0A087X1C5 515 aa21.06■□□□□ 0.96
HLA-A-201ENST00000376802 LRRC26Q2I0M4 334 aa21.06■□□□□ 0.96
HLA-A-201ENST00000376802 MFSD14CQ5VZR4 134 aa21.06■□□□□ 0.96
HLA-A-201ENST00000376802 TRPV1Q8NER1 839 aa21.06■□□□□ 0.96
HLA-A-201ENST00000376802 TMX2Q9Y320 296 aa21.06■□□□□ 0.96
HLA-A-201ENST00000376802 IVNS1ABPQ9Y6Y0 642 aa21.06■□□□□ 0.96
HLA-A-201ENST00000376802 COL11A1P12107 1806 aaPredicted RBP21.06■□□□□ 0.96
HLA-A-201ENST00000376802 AKR1B1P15121 316 aa21.05■□□□□ 0.96
HLA-A-201ENST00000376802 CYP2C19P33261 490 aa21.05■□□□□ 0.96
HLA-A-201ENST00000376802 MAGEA10P43363 369 aaPredicted RBP21.05■□□□□ 0.96
HLA-A-201ENST00000376802 ATP2B2Q01814 1243 aa21.05■□□□□ 0.96
HLA-A-201ENST00000376802 C20orf194Q5TEA3 1177 aa21.05■□□□□ 0.96
HLA-A-201ENST00000376802 C12orf60Q5U649 245 aa21.05■□□□□ 0.96
HLA-A-201ENST00000376802 TANGO6Q9C0B7 1094 aa21.05■□□□□ 0.96
HLA-A-201ENST00000376802 RCAN3Q9UKA8 241 aa21.05■□□□□ 0.96
HLA-A-201ENST00000376802 USP17L12C9JPN9 530 aa21.04■□□□□ 0.96
HLA-A-201ENST00000376802 USP17L21D6R901 530 aa21.04■□□□□ 0.96
HLA-A-201ENST00000376802 DSG3P32926 999 aa21.04■□□□□ 0.96
HLA-A-201ENST00000376802 CDK8P49336 464 aa21.04■□□□□ 0.96
HLA-A-201ENST00000376802 UBE3CQ15386 1083 aa21.04■□□□□ 0.96
HLA-A-201ENST00000376802 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.04■□□□□ 0.96
HLA-A-201ENST00000376802 SPATC1LQ9H0A9 340 aa21.04■□□□□ 0.96
HLA-A-201ENST00000376802 DDX20Q9UHI6 824 aaKnown RBP21.04■□□□□ 0.96
HLA-A-201ENST00000376802 ERCC3P19447 782 aa21.04■□□□□ 0.96
HLA-A-201ENST00000376802 ADORA2AP29274 412 aa21.04■□□□□ 0.96
HLA-A-201ENST00000376802 SPICE1Q8N0Z3 855 aa21.04■□□□□ 0.96
HLA-A-201ENST00000376802 SHCBP1Q8NEM2 672 aa21.04■□□□□ 0.96
HLA-A-201ENST00000376802 LPAR1Q92633 364 aa21.04■□□□□ 0.96
HLA-A-201ENST00000376802 STRNO43815 780 aa21.03■□□□□ 0.96
HLA-A-201ENST00000376802 SMARCA5O60264 1052 aaPredicted RBP21.03■□□□□ 0.96
HLA-A-201ENST00000376802 COBLO75128 1261 aa21.03■□□□□ 0.96
HLA-A-201ENST00000376802 CYBAP13498 195 aa21.03■□□□□ 0.96
HLA-A-201ENST00000376802 C16orf86Q6ZW13 317 aa21.03■□□□□ 0.96
HLA-A-201ENST00000376802 CCDC17Q96LX7 622 aa21.03■□□□□ 0.96
HLA-A-201ENST00000376802 CHMP4BQ9H444 224 aaKnown RBP21.03■□□□□ 0.96
HLA-A-201ENST00000376802 CNGA1P29973 690 aa21.02■□□□□ 0.95
HLA-A-201ENST00000376802 ICA1Q05084 483 aa21.02■□□□□ 0.95
HLA-A-201ENST00000376802 OLFML2BQ68BL8 750 aa21.02■□□□□ 0.95
HLA-A-201ENST00000376802 DPP9Q86TI2 863 aa21.02■□□□□ 0.95
HLA-A-201ENST00000376802 MB21D1Q8N884 522 aa21.02■□□□□ 0.95
HLA-A-201ENST00000376802 ATG4CQ96DT6 458 aa21.02■□□□□ 0.95
HLA-A-201ENST00000376802 LRRCC1Q9C099 1032 aa21.02■□□□□ 0.95
HLA-A-201ENST00000376802 PUS7LQ9H0K6 701 aaKnown RBP21.02■□□□□ 0.95
HLA-A-201ENST00000376802 VCPKMTQ9H867 229 aa21.02■□□□□ 0.95
HLA-A-201ENST00000376802 ARHGEF10LQ9HCE6 1279 aa21.02■□□□□ 0.95
HLA-A-201ENST00000376802 GREB1LQ9C091 1923 aaPredicted RBP21.01■□□□□ 0.95
HLA-A-201ENST00000376802 MSCO60682 206 aa21.01■□□□□ 0.95
HLA-A-201ENST00000376802 FLOT1O75955 427 aa21.01■□□□□ 0.95
HLA-A-201ENST00000376802 CTR9Q6PD62 1173 aa21.01■□□□□ 0.95
HLA-A-201ENST00000376802 SENP6Q9GZR1 1112 aaPredicted RBP21.01■□□□□ 0.95
HLA-A-201ENST00000376802 SLC4A4Q9Y6R1 1079 aa21.01■□□□□ 0.95
HLA-A-201ENST00000376802 SMCHD1A6NHR9 2005 aa21.01■□□□□ 0.95
HLA-A-201ENST00000376802 EEF2P13639 858 aaKnown RBP21■□□□□ 0.95
HLA-A-201ENST00000376802 LRIT3Q3SXY7 679 aa21■□□□□ 0.95
HLA-A-201ENST00000376802 TDHQ8IZJ6 230 aa21■□□□□ 0.95
HLA-A-201ENST00000376802 ADAMTS5Q9UNA0 930 aa21■□□□□ 0.95
HLA-A-201ENST00000376802 LAMA2P24043 3122 aaKnown RBP20.99■□□□□ 0.95
HLA-A-201ENST00000376802 WDR46O15213 610 aaKnown RBP20.99■□□□□ 0.95
HLA-A-201ENST00000376802 PLS1Q14651 629 aa20.99■□□□□ 0.95
HLA-A-201ENST00000376802 TMEM132BQ14DG7 1078 aa20.99■□□□□ 0.95
HLA-A-201ENST00000376802 GPR153Q6NV75 609 aa20.99■□□□□ 0.95
HLA-A-201ENST00000376802 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.99■□□□□ 0.95
HLA-A-201ENST00000376802 MROH8Q9H579 483 aa20.99■□□□□ 0.95
HLA-A-201ENST00000376802 SH2D4AQ9H788 454 aa20.99■□□□□ 0.95
HLA-A-201ENST00000376802 KANSL2Q9H9L4 492 aa20.99■□□□□ 0.95
HLA-A-201ENST00000376802 PLXNA1Q9UIW2 1896 aa20.98■□□□□ 0.95
HLA-A-201ENST00000376802 DNM1LO00429 736 aa20.98■□□□□ 0.95
HLA-A-201ENST00000376802 ZSCAN25Q6NSZ9 544 aa20.98■□□□□ 0.95
HLA-A-201ENST00000376802 ABRAQ8N0Z2 381 aa20.98■□□□□ 0.95
HLA-A-201ENST00000376802 UBE2OQ9C0C9 1292 aaKnown RBP20.98■□□□□ 0.95
HLA-A-201ENST00000376802 NCAPG2Q86XI2 1143 aa20.97■□□□□ 0.95
HLA-A-201ENST00000376802 AMOTL1Q8IY63 956 aa20.97■□□□□ 0.95
HLA-A-201ENST00000376802 PIAS4Q8N2W9 510 aaPredicted RBP20.97■□□□□ 0.95
HLA-A-201ENST00000376802 DDRGK1Q96HY6 314 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms