RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 DGKZQ13574 1117 aa28.64■■■□□ 2.18
ALKAL1-201ENST00000358543 TREML2Q5T2D2 321 aa28.64■■■□□ 2.18
ALKAL1-201ENST00000358543 IQCA1Q86XH1 822 aa28.64■■■□□ 2.18
ALKAL1-201ENST00000358543 ZYXQ15942 572 aaKnown RBP28.63■■■□□ 2.17
ALKAL1-201ENST00000358543 RALYLQ86SE5 291 aaKnown RBP28.63■■■□□ 2.17
ALKAL1-201ENST00000358543 GOPCQ9HD26 462 aa28.63■■■□□ 2.17
ALKAL1-201ENST00000358543 C8orf34Q49A92 452 aa28.62■■■□□ 2.17
ALKAL1-201ENST00000358543 DGKHQ86XP1 1220 aa28.62■■■□□ 2.17
ALKAL1-201ENST00000358543 STX8Q9UNK0 236 aa28.62■■■□□ 2.17
ALKAL1-201ENST00000358543 VCAM1P19320 739 aa28.61■■■□□ 2.17
ALKAL1-201ENST00000358543 KRT32Q14532 448 aa28.61■■■□□ 2.17
ALKAL1-201ENST00000358543 RASEFQ8IZ41 740 aa28.61■■■□□ 2.17
ALKAL1-201ENST00000358543 ANKS1AQ92625 1134 aa28.61■■■□□ 2.17
ALKAL1-201ENST00000358543 ZSCAN10Q96SZ4 725 aaPredicted RBP28.61■■■□□ 2.17
ALKAL1-201ENST00000358543 HSPA1AP0DMV8 641 aaKnown RBP28.6■■■□□ 2.17
ALKAL1-201ENST00000358543 HSPA1BP0DMV9 641 aaKnown RBP28.6■■■□□ 2.17
ALKAL1-201ENST00000358543 TAF1CQ15572 869 aaPredicted RBP28.6■■■□□ 2.17
ALKAL1-201ENST00000358543 MB21D2Q8IYB1 491 aaPredicted RBP28.6■■■□□ 2.17
ALKAL1-201ENST00000358543 GMCL1P1Q8NEA9 526 aa28.6■■■□□ 2.17
ALKAL1-201ENST00000358543 ZFYVE28Q9HCC9 887 aa28.6■■■□□ 2.17
ALKAL1-201ENST00000358543 PNMA3Q9UL41 463 aa28.6■■■□□ 2.17
ALKAL1-201ENST00000358543 MYH4Q9Y623 1939 aa28.59■■■□□ 2.17
ALKAL1-201ENST00000358543 F5H6K3 240 aa28.59■■■□□ 2.17
ALKAL1-201ENST00000358543 TOP1P11387 765 aaKnown RBP28.59■■■□□ 2.17
ALKAL1-201ENST00000358543 KLRC3Q07444 240 aa28.59■■■□□ 2.17
ALKAL1-201ENST00000358543 KIAA1755Q5JYT7 1200 aa28.59■■■□□ 2.17
ALKAL1-201ENST00000358543 RCSD1Q6JBY9 416 aa28.59■■■□□ 2.17
ALKAL1-201ENST00000358543 CYB5R4Q7L1T6 521 aa28.59■■■□□ 2.17
ALKAL1-201ENST00000358543 PARK7Q99497 189 aaKnown RBP28.59■■■□□ 2.17
ALKAL1-201ENST00000358543 UBAC1Q9BSL1 405 aa28.59■■■□□ 2.17
ALKAL1-201ENST00000358543 MTA3Q9BTC8 594 aa28.59■■■□□ 2.17
ALKAL1-201ENST00000358543 USP17L15C9J2P7 530 aa28.58■■■□□ 2.17
ALKAL1-201ENST00000358543 USP17L13C9JLJ4 530 aa28.58■■■□□ 2.17
ALKAL1-201ENST00000358543 USP17L11C9JVI0 530 aa28.58■■■□□ 2.17
ALKAL1-201ENST00000358543 USP17L18D6R9N7 530 aa28.58■■■□□ 2.17
ALKAL1-201ENST00000358543 USP17L22D6RA61 530 aa28.58■■■□□ 2.17
ALKAL1-201ENST00000358543 USP17L17D6RBQ6 530 aa28.58■■■□□ 2.17
ALKAL1-201ENST00000358543 USP17L19D6RCP7 530 aa28.58■■■□□ 2.17
ALKAL1-201ENST00000358543 USP17L20D6RJB6 530 aa28.58■■■□□ 2.17
ALKAL1-201ENST00000358543 WDR46O15213 610 aaKnown RBP28.58■■■□□ 2.17
ALKAL1-201ENST00000358543 OSBPP22059 807 aa28.58■■■□□ 2.17
ALKAL1-201ENST00000358543 USP17L24Q0WX57 530 aa28.58■■■□□ 2.17
ALKAL1-201ENST00000358543 CRHR2Q13324 411 aa28.58■■■□□ 2.17
ALKAL1-201ENST00000358543 CATSPERGQ6ZRH7 1159 aa28.58■■■□□ 2.17
ALKAL1-201ENST00000358543 TMEM47Q9BQJ4 181 aa28.58■■■□□ 2.17
ALKAL1-201ENST00000358543 ZKSCAN3Q9BRR0 538 aa28.58■■■□□ 2.17
ALKAL1-201ENST00000358543 TBC1D8O95759 1140 aa28.57■■■□□ 2.16
ALKAL1-201ENST00000358543 MCCP23508 829 aa28.57■■■□□ 2.16
ALKAL1-201ENST00000358543 NOM1Q5C9Z4 860 aaKnown RBP28.57■■■□□ 2.16
ALKAL1-201ENST00000358543 NEK1Q96PY6 1258 aa28.57■■■□□ 2.16
ALKAL1-201ENST00000358543 TLR2O60603 784 aa28.56■■■□□ 2.16
ALKAL1-201ENST00000358543 TNKSO95271 1327 aa28.56■■■□□ 2.16
ALKAL1-201ENST00000358543 NDUFB10O96000 172 aa28.56■■■□□ 2.16
ALKAL1-201ENST00000358543 MCM5P33992 734 aa28.56■■■□□ 2.16
ALKAL1-201ENST00000358543 SPICE1Q8N0Z3 855 aa28.56■■■□□ 2.16
ALKAL1-201ENST00000358543 LRRC47Q8N1G4 583 aaKnown RBP28.56■■■□□ 2.16
ALKAL1-201ENST00000358543 ENAHQ8N8S7 591 aaPredicted RBP28.56■■■□□ 2.16
ALKAL1-201ENST00000358543 ASCC2Q9H1I8 757 aaPredicted RBP28.56■■■□□ 2.16
ALKAL1-201ENST00000358543 RPAP3Q9H6T3 665 aaPredicted RBP28.56■■■□□ 2.16
ALKAL1-201ENST00000358543 SNX14Q9Y5W7 946 aa28.56■■■□□ 2.16
ALKAL1-201ENST00000358543 FOXN1O15353 648 aa28.55■■■□□ 2.16
ALKAL1-201ENST00000358543 SEC24BO95487 1268 aa28.55■■■□□ 2.16
ALKAL1-201ENST00000358543 CYP2C8P10632 490 aa28.55■■■□□ 2.16
ALKAL1-201ENST00000358543 SART3Q15020 963 aaKnown RBP28.55■■■□□ 2.16
ALKAL1-201ENST00000358543 SEC23AQ15436 765 aa28.55■■■□□ 2.16
ALKAL1-201ENST00000358543 R3HDMLQ9H3Y0 253 aa28.55■■■□□ 2.16
ALKAL1-201ENST00000358543 HMGB1P09429 215 aaKnown RBP28.54■■■□□ 2.16
ALKAL1-201ENST00000358543 CTCFP49711 727 aaPredicted RBP28.54■■■□□ 2.16
ALKAL1-201ENST00000358543 ANTXR2P58335 489 aa28.54■■■□□ 2.16
ALKAL1-201ENST00000358543 IRX3P78415 501 aaPredicted RBP28.54■■■□□ 2.16
ALKAL1-201ENST00000358543 SLFN13Q68D06 897 aa28.54■■■□□ 2.16
ALKAL1-201ENST00000358543 GMCL1Q96IK5 515 aa28.54■■■□□ 2.16
ALKAL1-201ENST00000358543 ADGRA2Q96PE1 1338 aa28.53■■■□□ 2.16
ALKAL1-201ENST00000358543 ERICH2A1L162 156 aa28.53■■■□□ 2.16
ALKAL1-201ENST00000358543 ADCK5Q3MIX3 580 aa28.53■■■□□ 2.16
ALKAL1-201ENST00000358543 P2RX7Q99572 595 aaKnown RBP28.53■■■□□ 2.16
ALKAL1-201ENST00000358543 WDR19Q8NEZ3 1342 aa28.52■■■□□ 2.16
ALKAL1-201ENST00000358543 IFIT3O14879 490 aaKnown RBP28.52■■■□□ 2.16
ALKAL1-201ENST00000358543 RAD21O60216 631 aa28.52■■■□□ 2.16
ALKAL1-201ENST00000358543 IFIT1BQ5T764 474 aaKnown RBP28.52■■■□□ 2.16
ALKAL1-201ENST00000358543 CHST3Q7LGC8 479 aa28.52■■■□□ 2.16
ALKAL1-201ENST00000358543 IGDCC4Q8TDY8 1250 aa28.52■■■□□ 2.16
ALKAL1-201ENST00000358543 TMEM87BQ96K49 555 aa28.52■■■□□ 2.16
ALKAL1-201ENST00000358543 HOXC10Q9NYD6 342 aa28.52■■■□□ 2.16
ALKAL1-201ENST00000358543 PRC1O43663 620 aa28.51■■■□□ 2.15
ALKAL1-201ENST00000358543 HSPA8P11142 646 aaKnown RBP28.51■■■□□ 2.15
ALKAL1-201ENST00000358543 GCLCP48506 637 aaPredicted RBP28.51■■■□□ 2.15
ALKAL1-201ENST00000358543 COG2Q14746 738 aa28.51■■■□□ 2.15
ALKAL1-201ENST00000358543 FAM83BQ5T0W9 1011 aa28.51■■■□□ 2.15
ALKAL1-201ENST00000358543 C17orf99Q6UX52 265 aa28.51■■■□□ 2.15
ALKAL1-201ENST00000358543 DHX32Q7L7V1 743 aaKnown RBP28.51■■■□□ 2.15
ALKAL1-201ENST00000358543 SMCR8Q8TEV9 937 aaPredicted RBP28.51■■■□□ 2.15
ALKAL1-201ENST00000358543 GTF3C2Q8WUA4 911 aaPredicted RBP28.51■■■□□ 2.15
ALKAL1-201ENST00000358543 TANGO6Q9C0B7 1094 aa28.51■■■□□ 2.15
ALKAL1-201ENST00000358543 KAT14Q9H8E8 782 aa28.51■■■□□ 2.15
ALKAL1-201ENST00000358543 TSKSQ9UJT2 592 aa28.51■■■□□ 2.15
ALKAL1-201ENST00000358543 GPR25O00155 361 aa28.5■■■□□ 2.15
ALKAL1-201ENST00000358543 PSMA5P28066 241 aa28.5■■■□□ 2.15
ALKAL1-201ENST00000358543 EXOSC10Q01780 885 aaKnown RBP28.5■■■□□ 2.15
ALKAL1-201ENST00000358543 LBX2Q6XYB7 198 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms