RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 TMEM47Q9BQJ4 181 aa21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 LRRC2Q9BYS8 371 aa21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 GPHNQ9NQX3 736 aaPredicted RBP21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 PDHXO00330 501 aa21.04■□□□□ 0.96
PDLIM7-202ENST00000355841 VCAM1P19320 739 aa21.04■□□□□ 0.96
PDLIM7-202ENST00000355841 NOVP48745 357 aa21.04■□□□□ 0.96
PDLIM7-202ENST00000355841 RASGRP2Q7LDG7 609 aa21.04■□□□□ 0.96
PDLIM7-202ENST00000355841 PROCA1Q8NCQ7 364 aaPredicted RBP21.04■□□□□ 0.96
PDLIM7-202ENST00000355841 MKL1Q969V6 931 aa21.04■□□□□ 0.96
PDLIM7-202ENST00000355841 SH2D4AQ9H788 454 aa21.04■□□□□ 0.96
PDLIM7-202ENST00000355841 VCPKMTQ9H867 229 aa21.04■□□□□ 0.96
PDLIM7-202ENST00000355841 SENP2Q9HC62 589 aa21.04■□□□□ 0.96
PDLIM7-202ENST00000355841 AGTPBP1Q9UPW5 1226 aa21.04■□□□□ 0.96
PDLIM7-202ENST00000355841 F5H6K3 240 aa21.03■□□□□ 0.96
PDLIM7-202ENST00000355841 PRC1O43663 620 aa21.03■□□□□ 0.96
PDLIM7-202ENST00000355841 TRPA1O75762 1119 aa21.03■□□□□ 0.96
PDLIM7-202ENST00000355841 KLRC3Q07444 240 aa21.03■□□□□ 0.96
PDLIM7-202ENST00000355841 KRT32Q14532 448 aa21.03■□□□□ 0.96
PDLIM7-202ENST00000355841 JMYQ8N9B5 988 aa21.03■□□□□ 0.96
PDLIM7-202ENST00000355841 NUP88Q99567 741 aaPredicted RBP21.03■□□□□ 0.96
PDLIM7-202ENST00000355841 IFIT3O14879 490 aaKnown RBP21.02■□□□□ 0.96
PDLIM7-202ENST00000355841 NDUFB10O96000 172 aa21.02■□□□□ 0.96
PDLIM7-202ENST00000355841 MCM5P33992 734 aa21.02■□□□□ 0.96
PDLIM7-202ENST00000355841 MAP2K1Q02750 393 aaPredicted RBP21.02■□□□□ 0.96
PDLIM7-202ENST00000355841 ANKRD23Q86SG2 305 aa21.02■□□□□ 0.96
PDLIM7-202ENST00000355841 REM2Q8IYK8 340 aaPredicted RBP21.02■□□□□ 0.96
PDLIM7-202ENST00000355841 GOPCQ9HD26 462 aa21.02■□□□□ 0.96
PDLIM7-202ENST00000355841 RNF186Q9NXI6 227 aa21.02■□□□□ 0.96
PDLIM7-202ENST00000355841 EIF5BO60841 1220 aaKnown RBP21.02■□□□□ 0.95
PDLIM7-202ENST00000355841 CYP2C8P10632 490 aa21.02■□□□□ 0.95
PDLIM7-202ENST00000355841 NT5C2P49902 561 aa21.02■□□□□ 0.95
PDLIM7-202ENST00000355841 SEC23AQ15436 765 aa21.02■□□□□ 0.95
PDLIM7-202ENST00000355841 DGKHQ86XP1 1220 aa21.02■□□□□ 0.95
PDLIM7-202ENST00000355841 C12orf42Q96LP6 360 aa21.02■□□□□ 0.95
PDLIM7-202ENST00000355841 RPAP3Q9H6T3 665 aaPredicted RBP21.02■□□□□ 0.95
PDLIM7-202ENST00000355841 TSKSQ9UJT2 592 aa21.02■□□□□ 0.95
PDLIM7-202ENST00000355841 TOP1P11387 765 aaKnown RBP21.01■□□□□ 0.95
PDLIM7-202ENST00000355841 CASTP20810 708 aaKnown RBP21.01■□□□□ 0.95
PDLIM7-202ENST00000355841 TMEM67Q5HYA8 995 aa21.01■□□□□ 0.95
PDLIM7-202ENST00000355841 PPP4R3BQ5MIZ7 849 aa21.01■□□□□ 0.95
PDLIM7-202ENST00000355841 OTUD7BQ6GQQ9 843 aa21.01■□□□□ 0.95
PDLIM7-202ENST00000355841 TTC14Q96N46 770 aa21.01■□□□□ 0.95
PDLIM7-202ENST00000355841 R3HDMLQ9H3Y0 253 aa21.01■□□□□ 0.95
PDLIM7-202ENST00000355841 WBP1LQ9NX94 342 aa21.01■□□□□ 0.95
PDLIM7-202ENST00000355841 MYH4Q9Y623 1939 aa21■□□□□ 0.95
PDLIM7-202ENST00000355841 LOC285556D6RIA3 1793 aa21■□□□□ 0.95
PDLIM7-202ENST00000355841 TBC1D8O95759 1140 aa21■□□□□ 0.95
PDLIM7-202ENST00000355841 FAM83BQ5T0W9 1011 aa21■□□□□ 0.95
PDLIM7-202ENST00000355841 IFIT1BQ5T764 474 aaKnown RBP21■□□□□ 0.95
PDLIM7-202ENST00000355841 SLFN13Q68D06 897 aa21■□□□□ 0.95
PDLIM7-202ENST00000355841 IGDCC4Q8TDY8 1250 aa21■□□□□ 0.95
PDLIM7-202ENST00000355841 BACH2Q9BYV9 841 aa21■□□□□ 0.95
PDLIM7-202ENST00000355841 TANGO6Q9C0B7 1094 aa21■□□□□ 0.95
PDLIM7-202ENST00000355841 ERICH2A1L162 156 aa20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 TAF1CQ15572 869 aaPredicted RBP20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 SAMD1Q6SPF0 538 aaPredicted RBP20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 DHX32Q7L7V1 743 aaKnown RBP20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 GMCL1P1Q8NEA9 526 aa20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 LPAR1Q92633 364 aa20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 BEGAINQ9BUH8 593 aa20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 KAT14Q9H8E8 782 aa20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 EXOSC10Q01780 885 aaKnown RBP20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 CRHR2Q13324 411 aa20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 WTAPQ15007 396 aa20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 SART3Q15020 963 aaKnown RBP20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 CCDC178Q5BJE1 867 aa20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 BLOC1S2Q6QNY1 142 aa20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 ANKS1AQ92625 1134 aa20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 UPF3BQ9BZI7 483 aaKnown RBP20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 ASCC2Q9H1I8 757 aaPredicted RBP20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 ISY1Q9ULR0 285 aaKnown RBP20.99■□□□□ 0.95
PDLIM7-202ENST00000355841 PNMA1Q8ND90 353 aa20.98■□□□□ 0.95
PDLIM7-202ENST00000355841 LY9Q9HBG7 655 aa20.98■□□□□ 0.95
PDLIM7-202ENST00000355841 SH2B2O14492 632 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-202ENST00000355841 WDR46O15213 610 aaKnown RBP20.97■□□□□ 0.95
PDLIM7-202ENST00000355841 ALDH1A1P00352 501 aa20.97■□□□□ 0.95
PDLIM7-202ENST00000355841 HMGB1P09429 215 aaKnown RBP20.97■□□□□ 0.95
PDLIM7-202ENST00000355841 PSMA5P28066 241 aa20.97■□□□□ 0.95
PDLIM7-202ENST00000355841 HOXA7P31268 230 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-202ENST00000355841 IRX3P78415 501 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-202ENST00000355841 CATSPERGQ6ZRH7 1159 aa20.97■□□□□ 0.95
PDLIM7-202ENST00000355841 P2RX7Q99572 595 aaKnown RBP20.97■□□□□ 0.95
PDLIM7-202ENST00000355841 C22orf23Q9BZE7 217 aa20.97■□□□□ 0.95
PDLIM7-202ENST00000355841 FBXO28Q9NVF7 368 aa20.97■□□□□ 0.95
PDLIM7-202ENST00000355841 SYNPO2Q9UMS6 1093 aa20.97■□□□□ 0.95
PDLIM7-202ENST00000355841 USP17L15C9J2P7 530 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 USP17L13C9JLJ4 530 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 USP17L11C9JVI0 530 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 USP17L18D6R9N7 530 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 USP17L22D6RA61 530 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 USP17L17D6RBQ6 530 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 USP17L19D6RCP7 530 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 USP17L20D6RJB6 530 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 CA12O43570 354 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 PEX10O60683 326 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 RPS6KB1P23443 525 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 SLC1A4P43007 532 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 USP17L24Q0WX57 530 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 KCTD1Q719H9 257 aa20.96■□□□□ 0.95
PDLIM7-202ENST00000355841 SLC45A1Q9Y2W3 748 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms