RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 BOLA2Q9H3K6 86 aa19.22■□□□□ 0.67
PDGFA-201ENST00000354513 C11orf49Q9H6J7 331 aa19.22■□□□□ 0.67
PDGFA-201ENST00000354513 CABP5Q9NP86 173 aa19.22■□□□□ 0.67
PDGFA-201ENST00000354513 PAG1Q9NWQ8 432 aa19.22■□□□□ 0.67
PDGFA-201ENST00000354513 RAB11FIP3O75154 756 aa19.21■□□□□ 0.67
PDGFA-201ENST00000354513 HMMRO75330 724 aa19.21■□□□□ 0.67
PDGFA-201ENST00000354513 MBD4O95243 580 aa19.21■□□□□ 0.67
PDGFA-201ENST00000354513 ATP5JP18859 108 aa19.21■□□□□ 0.67
PDGFA-201ENST00000354513 GRB14Q14449 540 aa19.21■□□□□ 0.67
PDGFA-201ENST00000354513 NPLOC4Q8TAT6 608 aa19.21■□□□□ 0.67
PDGFA-201ENST00000354513 ZMYND8Q9ULU4 1186 aaPredicted RBP19.21■□□□□ 0.67
PDGFA-201ENST00000354513 CYP2D7A0A087X1C5 515 aa19.2■□□□□ 0.66
PDGFA-201ENST00000354513 A0A1W2PPC1 479 aa19.2■□□□□ 0.66
PDGFA-201ENST00000354513 AKR1B1P15121 316 aa19.2■□□□□ 0.66
PDGFA-201ENST00000354513 HAUS7Q99871 368 aa19.2■□□□□ 0.66
PDGFA-201ENST00000354513 SLC15A5A6NIM6 579 aa19.19■□□□□ 0.66
PDGFA-201ENST00000354513 HOXC6P09630 235 aa19.19■□□□□ 0.66
PDGFA-201ENST00000354513 TRPV1Q8NER1 839 aa19.19■□□□□ 0.66
PDGFA-201ENST00000354513 LRCH3Q96II8 777 aa19.19■□□□□ 0.66
PDGFA-201ENST00000354513 BCL11AQ9H165 835 aa19.19■□□□□ 0.66
PDGFA-201ENST00000354513 MPHOSPH10O00566 681 aaKnown RBP19.18■□□□□ 0.66
PDGFA-201ENST00000354513 SYN1P17600 705 aa19.18■□□□□ 0.66
PDGFA-201ENST00000354513 CCNA1P78396 465 aa19.18■□□□□ 0.66
PDGFA-201ENST00000354513 CCAR1Q8IX12 1150 aaKnown RBP19.18■□□□□ 0.66
PDGFA-201ENST00000354513 RCAN3Q9UKA8 241 aa19.18■□□□□ 0.66
PDGFA-201ENST00000354513 COL6A3P12111 3177 aa19.17■□□□□ 0.66
PDGFA-201ENST00000354513 SMARCA5O60264 1052 aaPredicted RBP19.17■□□□□ 0.66
PDGFA-201ENST00000354513 BMP8BP34820 402 aa19.17■□□□□ 0.66
PDGFA-201ENST00000354513 LRRC26Q2I0M4 334 aa19.17■□□□□ 0.66
PDGFA-201ENST00000354513 TMEM179Q6ZVK1 233 aa19.17■□□□□ 0.66
PDGFA-201ENST00000354513 MOV10L1Q9BXT6 1211 aaKnown RBP19.17■□□□□ 0.66
PDGFA-201ENST00000354513 SWAP70Q9UH65 585 aa19.17■□□□□ 0.66
PDGFA-201ENST00000354513 C12orf60Q5U649 245 aa19.16■□□□□ 0.66
PDGFA-201ENST00000354513 WDR78Q5VTH9 848 aa19.16■□□□□ 0.66
PDGFA-201ENST00000354513 ATP8A2Q9NTI2 1148 aa19.16■□□□□ 0.66
PDGFA-201ENST00000354513 CYP2C19P33261 490 aa19.15■□□□□ 0.66
PDGFA-201ENST00000354513 MAGEA10P43363 369 aaPredicted RBP19.15■□□□□ 0.66
PDGFA-201ENST00000354513 COG2Q14746 738 aa19.15■□□□□ 0.66
PDGFA-201ENST00000354513 UBE3CQ15386 1083 aa19.15■□□□□ 0.66
PDGFA-201ENST00000354513 C16orf86Q6ZW13 317 aa19.15■□□□□ 0.66
PDGFA-201ENST00000354513 TANGO6Q9C0B7 1094 aa19.15■□□□□ 0.66
PDGFA-201ENST00000354513 PUS7LQ9H0K6 701 aaKnown RBP19.15■□□□□ 0.66
PDGFA-201ENST00000354513 CWC22Q9HCG8 908 aaKnown RBP19.15■□□□□ 0.66
PDGFA-201ENST00000354513 TMX2Q9Y320 296 aa19.15■□□□□ 0.66
PDGFA-201ENST00000354513 SMCHD1A6NHR9 2005 aa19.15■□□□□ 0.66
PDGFA-201ENST00000354513 USP17L12C9JPN9 530 aa19.14■□□□□ 0.65
PDGFA-201ENST00000354513 USP17L21D6R901 530 aa19.14■□□□□ 0.65
PDGFA-201ENST00000354513 GLRX3O76003 335 aaKnown RBP19.14■□□□□ 0.65
PDGFA-201ENST00000354513 CYBAP13498 195 aa19.14■□□□□ 0.65
PDGFA-201ENST00000354513 DSG3P32926 999 aa19.14■□□□□ 0.65
PDGFA-201ENST00000354513 CDK8P49336 464 aa19.14■□□□□ 0.65
PDGFA-201ENST00000354513 ATG4CQ96DT6 458 aa19.14■□□□□ 0.65
PDGFA-201ENST00000354513 SPATC1LQ9H0A9 340 aa19.14■□□□□ 0.65
PDGFA-201ENST00000354513 VCPKMTQ9H867 229 aa19.14■□□□□ 0.65
PDGFA-201ENST00000354513 COBLO75128 1261 aa19.13■□□□□ 0.65
PDGFA-201ENST00000354513 ADORA2AP29274 412 aa19.13■□□□□ 0.65
PDGFA-201ENST00000354513 ICA1Q05084 483 aa19.13■□□□□ 0.65
PDGFA-201ENST00000354513 SPICE1Q8N0Z3 855 aa19.13■□□□□ 0.65
PDGFA-201ENST00000354513 SHCBP1Q8NEM2 672 aa19.13■□□□□ 0.65
PDGFA-201ENST00000354513 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.13■□□□□ 0.65
PDGFA-201ENST00000354513 LRRCC1Q9C099 1032 aa19.13■□□□□ 0.65
PDGFA-201ENST00000354513 DDX20Q9UHI6 824 aaKnown RBP19.13■□□□□ 0.65
PDGFA-201ENST00000354513 ERCC3P19447 782 aa19.12■□□□□ 0.65
PDGFA-201ENST00000354513 MFSD14CQ5VZR4 134 aa19.12■□□□□ 0.65
PDGFA-201ENST00000354513 CTR9Q6PD62 1173 aa19.12■□□□□ 0.65
PDGFA-201ENST00000354513 LPAR1Q92633 364 aa19.12■□□□□ 0.65
PDGFA-201ENST00000354513 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.12■□□□□ 0.65
PDGFA-201ENST00000354513 IVNS1ABPQ9Y6Y0 642 aa19.12■□□□□ 0.65
PDGFA-201ENST00000354513 ATP2B2Q01814 1243 aa19.11■□□□□ 0.65
PDGFA-201ENST00000354513 OLFML2BQ68BL8 750 aa19.11■□□□□ 0.65
PDGFA-201ENST00000354513 ARHGEF10LQ9HCE6 1279 aa19.11■□□□□ 0.65
PDGFA-201ENST00000354513 FBXO28Q9NVF7 368 aa19.11■□□□□ 0.65
PDGFA-201ENST00000354513 HOXC10Q9NYD6 342 aa19.11■□□□□ 0.65
PDGFA-201ENST00000354513 SLC4A4Q9Y6R1 1079 aa19.11■□□□□ 0.65
PDGFA-201ENST00000354513 ROBO3Q96MS0 1386 aa19.1■□□□□ 0.65
PDGFA-201ENST00000354513 MCM3APO60318 1980 aa19.1■□□□□ 0.65
PDGFA-201ENST00000354513 WDR46O15213 610 aaKnown RBP19.1■□□□□ 0.65
PDGFA-201ENST00000354513 FLOT1O75955 427 aa19.1■□□□□ 0.65
PDGFA-201ENST00000354513 EEF2P13639 858 aaKnown RBP19.1■□□□□ 0.65
PDGFA-201ENST00000354513 TMEM132BQ14DG7 1078 aa19.1■□□□□ 0.65
PDGFA-201ENST00000354513 CCDC17Q96LX7 622 aa19.1■□□□□ 0.65
PDGFA-201ENST00000354513 ADAMTS5Q9UNA0 930 aa19.1■□□□□ 0.65
PDGFA-201ENST00000354513 LAMA2P24043 3122 aaKnown RBP19.1■□□□□ 0.65
PDGFA-201ENST00000354513 TSHZ3Q63HK5 1081 aa19.09■□□□□ 0.65
PDGFA-201ENST00000354513 MB21D1Q8N884 522 aa19.09■□□□□ 0.65
PDGFA-201ENST00000354513 STRBPQ96SI9 672 aaKnown RBP19.09■□□□□ 0.65
PDGFA-201ENST00000354513 CHMP4BQ9H444 224 aaKnown RBP19.09■□□□□ 0.65
PDGFA-201ENST00000354513 LRRC37A2A6NM11 1700 aa19.08■□□□□ 0.65
PDGFA-201ENST00000354513 GSG1L2A8MUP6 293 aa19.08■□□□□ 0.65
PDGFA-201ENST00000354513 STRNO43815 780 aa19.08■□□□□ 0.65
PDGFA-201ENST00000354513 CNGA1P29973 690 aa19.08■□□□□ 0.65
PDGFA-201ENST00000354513 REPS2Q8NFH8 660 aa19.08■□□□□ 0.65
PDGFA-201ENST00000354513 OSBP2Q969R2 916 aa19.08■□□□□ 0.65
PDGFA-201ENST00000354513 EPB41L4AQ9HCS5 686 aaPredicted RBP19.08■□□□□ 0.65
PDGFA-201ENST00000354513 ECHDC1Q9NTX5 307 aa19.08■□□□□ 0.65
PDGFA-201ENST00000354513 DNM1LO00429 736 aa19.07■□□□□ 0.64
PDGFA-201ENST00000354513 MSCO60682 206 aa19.07■□□□□ 0.64
PDGFA-201ENST00000354513 RASA1P20936 1047 aa19.07■□□□□ 0.64
PDGFA-201ENST00000354513 LRIT3Q3SXY7 679 aa19.07■□□□□ 0.64
PDGFA-201ENST00000354513 ANO1Q5XXA6 986 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms