RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 GADL1Q6ZQY3 521 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 ERMNQ8TAM6 284 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 CHURC1Q8WUH1 139 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 ATP6V0A2Q9Y487 856 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 MED1Q15648 1581 aaPredicted RBP12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 PXDNQ92626 1479 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 FMN2Q9NZ56 1722 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 ZNF521Q96K83 1311 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 PDE6AP16499 860 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 Q6ZUG5 572 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 IFT81Q8WYA0 676 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 CCDC17Q96LX7 622 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 NAP1L4Q99733 375 aaKnown RBP12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 HAUS7Q99871 368 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 CEP83Q9Y592 693 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 RGL2O15211 777 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 HNRNPH2P55795 449 aaKnown RBP12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 SPAG1Q07617 926 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 UBE3CQ15386 1083 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 ZYXQ15942 572 aaKnown RBP12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 KIAA1524Q8TCG1 905 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 CSRNP1Q96S65 589 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 OSBPP22059 807 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 FAM160A1Q05DH4 1040 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 KIF5AQ12840 1032 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 SF3B3Q15393 1217 aaKnown RBP12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 GPR161Q8N6U8 529 aaKnown RBP12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 CELF1Q92879 486 aaKnown RBP12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 ATP8A2Q9NTI2 1148 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 IGKV5-2P06315 115 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 TERF2Q15554 542 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 CCDC129Q6ZRS4 1044 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 EAF2Q96CJ1 260 aaPredicted RBP12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 EFCC1Q9HA90 598 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 CD2APQ9Y5K6 639 aa12.73□□□□□ -0.37
NPC1L1-201ENST00000289547 STX17P56962 302 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 RRAGBQ5VZM2 374 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 DHX32Q7L7V1 743 aaKnown RBP12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 HACL1Q9UJ83 578 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 GYS1P13807 737 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 ARHGAP25P42331 645 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 CREB3L3Q68CJ9 461 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 TRIM47Q96LD4 638 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 LZTS2Q9BRK4 669 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 TCP11L1Q9NUJ3 509 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 IMPACTQ9P2X3 320 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 JRKLQ9Y4A0 524 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 KRT83P78385 493 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 CCNA1P78396 465 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 FANCCQ00597 558 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 E2F4Q16254 413 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 LRCH2Q5VUJ6 765 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 RPAINQ86UA6 219 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 SLC10A4Q96EP9 437 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 PLA2G12BQ9BX93 195 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 KIF4AO95239 1232 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 INTS5Q6P9B9 1019 aaKnown RBP12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 FMNL3Q8IVF7 1028 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 CCDC155Q8N6L0 562 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 CAPN7Q9Y6W3 813 aa12.72□□□□□ -0.37
NPC1L1-201ENST00000289547 BMP15O95972 392 aa12.71□□□□□ -0.37
NPC1L1-201ENST00000289547 PCP11498 1178 aaKnown RBP12.71□□□□□ -0.37
NPC1L1-201ENST00000289547 LMNB1P20700 586 aa12.71□□□□□ -0.37
NPC1L1-201ENST00000289547 GPSM2P81274 684 aa12.71□□□□□ -0.37
NPC1L1-201ENST00000289547 PTPN12Q05209 780 aaKnown RBP12.71□□□□□ -0.37
NPC1L1-201ENST00000289547 BCL9O00512 1426 aa12.71□□□□□ -0.37
NPC1L1-201ENST00000289547 AKR1B15C9JRZ8 316 aaPredicted RBP12.71□□□□□ -0.37
NPC1L1-201ENST00000289547 FGFR1OPO95684 399 aaKnown RBP12.71□□□□□ -0.37
NPC1L1-201ENST00000289547 HPDP32754 393 aaPredicted RBP12.71□□□□□ -0.37
NPC1L1-201ENST00000289547 NAPGQ99747 312 aaPredicted RBP12.71□□□□□ -0.37
NPC1L1-201ENST00000289547 TMEM87AQ8NBN3 555 aa12.71□□□□□ -0.37
NPC1L1-201ENST00000289547 CALML4Q96GE6 196 aa12.71□□□□□ -0.37
NPC1L1-201ENST00000289547 SELENOSQ9BQE4 189 aa12.71□□□□□ -0.37
NPC1L1-201ENST00000289547 PYM1Q9BRP8 204 aaKnown RBP12.71□□□□□ -0.37
NPC1L1-201ENST00000289547 CD209Q9NNX6 404 aa12.71□□□□□ -0.37
NPC1L1-201ENST00000289547 ARHGAP6O43182 974 aa12.71□□□□□ -0.38
NPC1L1-201ENST00000289547 GCKP35557 465 aa12.71□□□□□ -0.38
NPC1L1-201ENST00000289547 ETF1P62495 437 aaKnown RBP12.71□□□□□ -0.38
NPC1L1-201ENST00000289547 PPARAQ07869 468 aa12.71□□□□□ -0.38
NPC1L1-201ENST00000289547 PPP2R5BQ15173 497 aa12.71□□□□□ -0.38
NPC1L1-201ENST00000289547 DSCC1Q9BVC3 393 aa12.71□□□□□ -0.38
NPC1L1-201ENST00000289547 GPCPD1Q9NPB8 672 aa12.71□□□□□ -0.38
NPC1L1-201ENST00000289547 ROBO1Q9Y6N7 1651 aa12.71□□□□□ -0.38
NPC1L1-201ENST00000289547 ECM2O94769 699 aaPredicted RBP12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 CCDC172P0C7W6 258 aa12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 ABCB5Q2M3G0 1257 aa12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 LEO1Q8WVC0 666 aaPredicted RBP12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 TSG101Q99816 390 aa12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 BUB1BO60566 1050 aaPredicted RBP12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 ADORA1P30542 326 aa12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 ELP1O95163 1332 aa12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 TLDC2A0PJX2 215 aa12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 BRD3Q15059 726 aa12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 TBC1D10BQ4KMP7 808 aaPredicted RBP12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 GOLGA6BA6NDN3 693 aa12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 USP17L12C9JPN9 530 aa12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 USP17L21D6R901 530 aa12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 CCDC122Q5T0U0 273 aa12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 C6orf163Q5TEZ5 329 aa12.7□□□□□ -0.38
NPC1L1-201ENST00000289547 RUFY3Q7L099 469 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms