RNA–Protein interactions for RNA: ENST00000226091.2

EFNB3-201, Transcript of ephrin B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB3, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3-201ENST00000226091 ALX1Q15699 326 aa18.8■□□□□ 0.6
EFNB3-201ENST00000226091 TIGD1Q96MW7 591 aa18.8■□□□□ 0.6
EFNB3-201ENST00000226091 C4AP0C0L4 1744 aa18.8■□□□□ 0.6
EFNB3-201ENST00000226091 C4BP0C0L5 1744 aa18.8■□□□□ 0.6
EFNB3-201ENST00000226091 PARP4Q9UKK3 1724 aaKnown RBP18.8■□□□□ 0.6
EFNB3-201ENST00000226091 FANCGO15287 622 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 TSPY3P0CV98 308 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 TSPY8P0CW00 308 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 TROAPQ12815 778 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 SEC23AQ15436 765 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 TMTC2Q8N394 836 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 ZNF446Q9NWS9 450 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 PLEKHG2Q9H7P9 1386 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 CBFA2T2O43439 604 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 FOXP1Q9H334 677 aaPredicted RBP18.79■□□□□ 0.6
EFNB3-201ENST00000226091 L2HGDHQ9H9P8 463 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 KIF2AO00139 706 aaPredicted RBP18.79■□□□□ 0.6
EFNB3-201ENST00000226091 PLCD1P51178 756 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 PPFIBP1Q86W92 1011 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 VSTM4Q8IW00 320 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 CCDC12Q8WUD4 166 aaPredicted RBP18.79■□□□□ 0.6
EFNB3-201ENST00000226091 UBXN4Q92575 508 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 HPS3Q969F9 1004 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 PAGE5Q96GU1 130 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 BSDC1Q9NW68 430 aaPredicted RBP18.79■□□□□ 0.6
EFNB3-201ENST00000226091 TOGARAM1Q9Y4F4 1720 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 ZNF804BA4D1E1 1349 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 MYH2Q9UKX2 1941 aa18.79■□□□□ 0.6
EFNB3-201ENST00000226091 C6orf229H3BNL8 230 aa18.78■□□□□ 0.6
EFNB3-201ENST00000226091 N4BP3O15049 544 aa18.78■□□□□ 0.6
EFNB3-201ENST00000226091 IGSF22Q8N9C0 903 aa18.78■□□□□ 0.6
EFNB3-201ENST00000226091 PCMTD1Q96MG8 357 aaPredicted RBP18.78■□□□□ 0.6
EFNB3-201ENST00000226091 DPYDQ12882 1025 aa18.78■□□□□ 0.6
EFNB3-201ENST00000226091 TPTE2Q6XPS3 522 aa18.78■□□□□ 0.6
EFNB3-201ENST00000226091 GJA10Q969M2 543 aa18.78■□□□□ 0.6
EFNB3-201ENST00000226091 CCDC34Q96HJ3 373 aa18.78■□□□□ 0.6
EFNB3-201ENST00000226091 CEP131Q9UPN4 1083 aa18.78■□□□□ 0.6
EFNB3-201ENST00000226091 PPP2R2CQ9Y2T4 447 aa18.78■□□□□ 0.6
EFNB3-201ENST00000226091 SRPRBQ9Y5M8 271 aaKnown RBP18.78■□□□□ 0.6
EFNB3-201ENST00000226091 COL4A1P02462 1669 aa18.78■□□□□ 0.6
EFNB3-201ENST00000226091 ABL1P00519 1130 aa18.78■□□□□ 0.6
EFNB3-201ENST00000226091 RBL2Q08999 1139 aa18.78■□□□□ 0.6
EFNB3-201ENST00000226091 ZNF444Q8N0Y2 327 aaPredicted RBP18.78■□□□□ 0.6
EFNB3-201ENST00000226091 PNMA1Q8ND90 353 aa18.78■□□□□ 0.6
EFNB3-201ENST00000226091 ARHGEF1Q92888 912 aaKnown RBP18.78■□□□□ 0.6
EFNB3-201ENST00000226091 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.78■□□□□ 0.6
EFNB3-201ENST00000226091 BAZ2AQ9UIF9 1905 aaKnown RBP18.78■□□□□ 0.6
EFNB3-201ENST00000226091 CASP14P31944 242 aa18.77■□□□□ 0.6
EFNB3-201ENST00000226091 LETM2Q2VYF4 491 aa18.77■□□□□ 0.6
EFNB3-201ENST00000226091 CCDC93Q567U6 631 aa18.77■□□□□ 0.6
EFNB3-201ENST00000226091 USP17L2Q6R6M4 530 aa18.77■□□□□ 0.6
EFNB3-201ENST00000226091 TRIM34Q9BYJ4 488 aa18.77■□□□□ 0.6
EFNB3-201ENST00000226091 ACTN4O43707 911 aaKnown RBP18.77■□□□□ 0.59
EFNB3-201ENST00000226091 ETF1P62495 437 aaKnown RBP18.77■□□□□ 0.59
EFNB3-201ENST00000226091 NUP88Q99567 741 aaPredicted RBP18.77■□□□□ 0.59
EFNB3-201ENST00000226091 RTCBQ9Y3I0 505 aaKnown RBP18.77■□□□□ 0.59
EFNB3-201ENST00000226091 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.77■□□□□ 0.59
EFNB3-201ENST00000226091 CCDC194A0A1B0GVG4 234 aa18.76■□□□□ 0.59
EFNB3-201ENST00000226091 LDHBP07195 334 aaKnown RBP18.76■□□□□ 0.59
EFNB3-201ENST00000226091 UBE4AQ14139 1066 aa18.76■□□□□ 0.59
EFNB3-201ENST00000226091 FRMPD2Q68DX3 1309 aaPredicted RBP18.76■□□□□ 0.59
EFNB3-201ENST00000226091 MYH7P12883 1935 aa18.76■□□□□ 0.59
EFNB3-201ENST00000226091 SPECC1LQ69YQ0 1117 aa18.76■□□□□ 0.59
EFNB3-201ENST00000226091 TYW1BQ6NUM6 668 aa18.76■□□□□ 0.59
EFNB3-201ENST00000226091 KRT222Q8N1A0 295 aa18.76■□□□□ 0.59
EFNB3-201ENST00000226091 MXD3Q9BW11 206 aa18.76■□□□□ 0.59
EFNB3-201ENST00000226091 FAM205AQ6ZU69 1335 aa18.76■□□□□ 0.59
EFNB3-201ENST00000226091 PNPLA7Q6ZV29 1317 aa18.76■□□□□ 0.59
EFNB3-201ENST00000226091 SYNRGQ9UMZ2 1314 aa18.76■□□□□ 0.59
EFNB3-201ENST00000226091 MDM2Q00987 491 aaPredicted RBP18.76■□□□□ 0.59
EFNB3-201ENST00000226091 JAKMIP3Q5VZ66 844 aa18.76■□□□□ 0.59
EFNB3-201ENST00000226091 TRIM65Q6PJ69 517 aa18.76■□□□□ 0.59
EFNB3-201ENST00000226091 FAM196AQ6ZSG2 479 aa18.76■□□□□ 0.59
EFNB3-201ENST00000226091 ACRBPQ8NEB7 543 aa18.76■□□□□ 0.59
EFNB3-201ENST00000226091 RNF26Q9BY78 433 aaPredicted RBP18.76■□□□□ 0.59
EFNB3-201ENST00000226091 COL1A1P02452 1464 aaPredicted RBP18.75■□□□□ 0.59
EFNB3-201ENST00000226091 SCG2P13521 617 aa18.75■□□□□ 0.59
EFNB3-201ENST00000226091 DDX60Q8IY21 1712 aaKnown RBP18.75■□□□□ 0.59
EFNB3-201ENST00000226091 TMTC3Q6ZXV5 915 aa18.75■□□□□ 0.59
EFNB3-201ENST00000226091 CASQ1P31415 396 aa18.74■□□□□ 0.59
EFNB3-201ENST00000226091 STAT6P42226 847 aa18.74■□□□□ 0.59
EFNB3-201ENST00000226091 RTL9Q8NET4 1388 aa18.74■□□□□ 0.59
EFNB3-201ENST00000226091 FAM237AA0A1B0GTK4 181 aa18.74■□□□□ 0.59
EFNB3-201ENST00000226091 SLFN14P0C7P3 912 aa18.74■□□□□ 0.59
EFNB3-201ENST00000226091 SKIDA1Q1XH10 827 aa18.74■□□□□ 0.59
EFNB3-201ENST00000226091 REXO1L1PQ8IX06 675 aa18.74■□□□□ 0.59
EFNB3-201ENST00000226091 UFL1O94874 794 aa18.74■□□□□ 0.59
EFNB3-201ENST00000226091 KCNJ6P48051 423 aa18.74■□□□□ 0.59
EFNB3-201ENST00000226091 TAF3Q5VWG9 929 aa18.74■□□□□ 0.59
EFNB3-201ENST00000226091 NOL10Q9BSC4 688 aaKnown RBP18.74■□□□□ 0.59
EFNB3-201ENST00000226091 PHF20Q9BVI0 1012 aa18.74■□□□□ 0.59
EFNB3-201ENST00000226091 MRPL44Q9H9J2 332 aaKnown RBP18.74■□□□□ 0.59
EFNB3-201ENST00000226091 NUP98P52948 1817 aa18.73■□□□□ 0.59
EFNB3-201ENST00000226091 ATRNO75882 1429 aa18.73■□□□□ 0.59
EFNB3-201ENST00000226091 RAD51AP2Q09MP3 1159 aa18.73■□□□□ 0.59
EFNB3-201ENST00000226091 CCDC178Q5BJE1 867 aa18.73■□□□□ 0.59
EFNB3-201ENST00000226091 TC2NQ8N9U0 490 aa18.73■□□□□ 0.59
EFNB3-201ENST00000226091 TMEM60Q9H2L4 133 aa18.73■□□□□ 0.59
EFNB3-201ENST00000226091 BIN2Q9UBW5 565 aaPredicted RBP18.73■□□□□ 0.59
EFNB3-201ENST00000226091 TNNT3P45378 269 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms