RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 USP17L13C9JLJ4 530 aa24.25■■□□□ 1.47
CLN6-222ENST00000637667 USP17L11C9JVI0 530 aa24.25■■□□□ 1.47
CLN6-222ENST00000637667 USP17L18D6R9N7 530 aa24.25■■□□□ 1.47
CLN6-222ENST00000637667 USP17L22D6RA61 530 aa24.25■■□□□ 1.47
CLN6-222ENST00000637667 USP17L17D6RBQ6 530 aa24.25■■□□□ 1.47
CLN6-222ENST00000637667 USP17L19D6RCP7 530 aa24.25■■□□□ 1.47
CLN6-222ENST00000637667 USP17L20D6RJB6 530 aa24.25■■□□□ 1.47
CLN6-222ENST00000637667 FARP2O94887 1054 aaPredicted RBP24.25■■□□□ 1.47
CLN6-222ENST00000637667 HMGCRP04035 888 aa24.25■■□□□ 1.47
CLN6-222ENST00000637667 CYP2D6P10635 497 aa24.25■■□□□ 1.47
CLN6-222ENST00000637667 ERVK-9P63128 1117 aa24.25■■□□□ 1.47
CLN6-222ENST00000637667 ERVK-24P63145 666 aa24.25■■□□□ 1.47
CLN6-222ENST00000637667 USP17L24Q0WX57 530 aa24.25■■□□□ 1.47
CLN6-222ENST00000637667 DEFB118Q96PH6 123 aa24.25■■□□□ 1.47
CLN6-222ENST00000637667 PAGR1Q9BTK6 254 aa24.25■■□□□ 1.47
CLN6-222ENST00000637667 PAK6Q9NQU5 681 aaPredicted RBP24.25■■□□□ 1.47
CLN6-222ENST00000637667 PRKAB2O43741 272 aa24.24■■□□□ 1.47
CLN6-222ENST00000637667 MAPK4P31152 587 aa24.24■■□□□ 1.47
CLN6-222ENST00000637667 SEPT2Q15019 361 aa24.24■■□□□ 1.47
CLN6-222ENST00000637667 UBE3CQ15386 1083 aa24.24■■□□□ 1.47
CLN6-222ENST00000637667 POTEEQ6S8J3 1075 aa24.24■■□□□ 1.47
CLN6-222ENST00000637667 ATP8A2Q9NTI2 1148 aa24.24■■□□□ 1.47
CLN6-222ENST00000637667 NAV1Q8NEY1 1877 aa24.24■■□□□ 1.47
CLN6-222ENST00000637667 CAPN2P17655 700 aa24.23■■□□□ 1.47
CLN6-222ENST00000637667 VCAM1P19320 739 aa24.23■■□□□ 1.47
CLN6-222ENST00000637667 Q3C1V9 767 aa24.23■■□□□ 1.47
CLN6-222ENST00000637667 HABP4Q5JVS0 413 aaKnown RBP24.23■■□□□ 1.47
CLN6-222ENST00000637667 SLC44A5Q8NCS7 719 aa24.23■■□□□ 1.47
CLN6-222ENST00000637667 SOCS4Q8WXH5 440 aa24.23■■□□□ 1.47
CLN6-222ENST00000637667 NUDT12Q9BQG2 462 aa24.23■■□□□ 1.47
CLN6-222ENST00000637667 H0YGN5 161 aa24.22■■□□□ 1.47
CLN6-222ENST00000637667 MPHOSPH10O00566 681 aaKnown RBP24.22■■□□□ 1.47
CLN6-222ENST00000637667 TFRCP02786 760 aaKnown RBP24.22■■□□□ 1.47
CLN6-222ENST00000637667 CHGBP05060 677 aa24.22■■□□□ 1.47
CLN6-222ENST00000637667 CATSPERGQ6ZRH7 1159 aa24.22■■□□□ 1.47
CLN6-222ENST00000637667 CCAR1Q8IX12 1150 aaKnown RBP24.22■■□□□ 1.47
CLN6-222ENST00000637667 DPF3Q92784 378 aa24.22■■□□□ 1.47
CLN6-222ENST00000637667 HTATIP2Q9BUP3 242 aa24.22■■□□□ 1.47
CLN6-222ENST00000637667 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.22■■□□□ 1.474e-8■■■■□ 25.2
CLN6-222ENST00000637667 PORCNQ9H237 461 aa24.22■■□□□ 1.47
CLN6-222ENST00000637667 DCTPP1Q9H773 170 aa24.22■■□□□ 1.47
CLN6-222ENST00000637667 ECHDC1Q9NTX5 307 aa24.22■■□□□ 1.47
CLN6-222ENST00000637667 SWAP70Q9UH65 585 aa24.22■■□□□ 1.47
CLN6-222ENST00000637667 RABGAP1Q9Y3P9 1069 aa24.22■■□□□ 1.47
CLN6-222ENST00000637667 CYP2B6P20813 491 aa24.21■■□□□ 1.47
CLN6-222ENST00000637667 ZSCAN25Q6NSZ9 544 aa24.21■■□□□ 1.47
CLN6-222ENST00000637667 DYNLL2Q96FJ2 89 aa24.21■■□□□ 1.47
CLN6-222ENST00000637667 CRISPLD2Q9H0B8 497 aa24.21■■□□□ 1.47
CLN6-222ENST00000637667 TRIOBPQ9H2D6 2365 aa24.2■■□□□ 1.46
CLN6-222ENST00000637667 XRCC5P13010 732 aaKnown RBP24.2■■□□□ 1.46
CLN6-222ENST00000637667 TRIM32Q13049 653 aa24.2■■□□□ 1.46
CLN6-222ENST00000637667 TRIB2Q92519 343 aa24.2■■□□□ 1.46
CLN6-222ENST00000637667 RPAP3Q9H6T3 665 aaPredicted RBP24.2■■□□□ 1.46
CLN6-222ENST00000637667 A0A1W2PRG0 241 aa24.19■■□□□ 1.46
CLN6-222ENST00000637667 CNMDO75829 334 aa24.19■■□□□ 1.46
CLN6-222ENST00000637667 TMEM179Q6ZVK1 233 aa24.19■■□□□ 1.46
CLN6-222ENST00000637667 GPR142Q7Z601 462 aa24.19■■□□□ 1.46
CLN6-222ENST00000637667 PLEKHH3Q7Z736 793 aa24.19■■□□□ 1.46
CLN6-222ENST00000637667 RPTORQ8N122 1335 aa24.18■■□□□ 1.46
CLN6-222ENST00000637667 CCNA1P78396 465 aa24.18■■□□□ 1.46
CLN6-222ENST00000637667 MORN1Q5T089 497 aa24.18■■□□□ 1.46
CLN6-222ENST00000637667 C12orf60Q5U649 245 aa24.18■■□□□ 1.46
CLN6-222ENST00000637667 LBX2Q6XYB7 198 aa24.18■■□□□ 1.46
CLN6-222ENST00000637667 AMOTL1Q8IY63 956 aa24.18■■□□□ 1.46
CLN6-222ENST00000637667 USP6NLQ92738 828 aa24.18■■□□□ 1.46
CLN6-222ENST00000637667 DDRGK1Q96HY6 314 aa24.18■■□□□ 1.46
CLN6-222ENST00000637667 GPATCH3Q96I76 525 aa24.18■■□□□ 1.46
CLN6-222ENST00000637667 PUS7LQ9H0K6 701 aaKnown RBP24.18■■□□□ 1.46
CLN6-222ENST00000637667 HMX1Q9NP08 348 aaPredicted RBP24.18■■□□□ 1.46
CLN6-222ENST00000637667 SLC4A4Q9Y6R1 1079 aa24.18■■□□□ 1.46
CLN6-222ENST00000637667 CYP2D7A0A087X1C5 515 aa24.17■■□□□ 1.46
CLN6-222ENST00000637667 USP17L12C9JPN9 530 aa24.17■■□□□ 1.46
CLN6-222ENST00000637667 USP17L21D6R901 530 aa24.17■■□□□ 1.46
CLN6-222ENST00000637667 RGS2P41220 211 aa24.17■■□□□ 1.46
CLN6-222ENST00000637667 TRMT44Q8IYL2 757 aaKnown RBP24.17■■□□□ 1.46
CLN6-222ENST00000637667 CWC22Q9HCG8 908 aaKnown RBP24.17■■□□□ 1.46
CLN6-222ENST00000637667 SPDYE16A6NNV3 312 aaPredicted RBP24.16■■□□□ 1.46
CLN6-222ENST00000637667 SMIM22K7EJ46 135 aa24.16■■□□□ 1.46
CLN6-222ENST00000637667 AKR1B1P15121 316 aa24.16■■□□□ 1.46
CLN6-222ENST00000637667 ZKSCAN1P17029 563 aaPredicted RBP24.16■■□□□ 1.46
CLN6-222ENST00000637667 MAP3K21Q5TCX8 1036 aa24.16■■□□□ 1.46
CLN6-222ENST00000637667 COLQQ9Y215 455 aaPredicted RBP24.16■■□□□ 1.46
CLN6-222ENST00000637667 PLXNB2O15031 1838 aa24.16■■□□□ 1.46
CLN6-222ENST00000637667 PRKAR2AP13861 404 aaKnown RBP24.15■■□□□ 1.46
CLN6-222ENST00000637667 CDK8P49336 464 aa24.15■■□□□ 1.46
CLN6-222ENST00000637667 TSHZ3Q63HK5 1081 aa24.15■■□□□ 1.46
CLN6-222ENST00000637667 KBTBD3Q8NAB2 608 aa24.15■■□□□ 1.46
CLN6-222ENST00000637667 CCDC17Q96LX7 622 aa24.15■■□□□ 1.46
CLN6-222ENST00000637667 APBA2Q99767 749 aa24.15■■□□□ 1.46
CLN6-222ENST00000637667 BTBD7Q9P203 1132 aa24.15■■□□□ 1.46
CLN6-222ENST00000637667 GLRX3O76003 335 aaKnown RBP24.14■■□□□ 1.45
CLN6-222ENST00000637667 ICA1Q05084 483 aa24.14■■□□□ 1.45
CLN6-222ENST00000637667 C16orf86Q6ZW13 317 aa24.14■■□□□ 1.45
CLN6-222ENST00000637667 CLEC10AQ8IUN9 316 aa24.14■■□□□ 1.45
CLN6-222ENST00000637667 ARHGEF10LQ9HCE6 1279 aa24.14■■□□□ 1.45
CLN6-222ENST00000637667 PCDHB15Q9Y5E8 787 aa24.14■■□□□ 1.45
CLN6-222ENST00000637667 NR2E3Q9Y5X4 410 aa24.14■■□□□ 1.45
CLN6-222ENST00000637667 MAP2K5Q13163 448 aa24.13■■□□□ 1.45
CLN6-222ENST00000637667 COG2Q14746 738 aa24.13■■□□□ 1.45
CLN6-222ENST00000637667 WDR78Q5VTH9 848 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms