RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 SHMT1P34896 483 aa23.19■■□□□ 1.3
ATG4B-226ENST00000625810 USP14P54578 494 aa23.19■■□□□ 1.3
ATG4B-226ENST00000625810 TRIM32Q13049 653 aa23.19■■□□□ 1.3
ATG4B-226ENST00000625810 POTEEQ6S8J3 1075 aa23.19■■□□□ 1.3
ATG4B-226ENST00000625810 LCORLQ8N3X6 602 aa23.19■■□□□ 1.3
ATG4B-226ENST00000625810 GTF3C2Q8WUA4 911 aaPredicted RBP23.19■■□□□ 1.3
ATG4B-226ENST00000625810 SDR42E1Q8WUS8 393 aa23.19■■□□□ 1.3
ATG4B-226ENST00000625810 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.19■■□□□ 1.3
ATG4B-226ENST00000625810 TRIB2Q92519 343 aa23.18■■□□□ 1.3
ATG4B-226ENST00000625810 HAUS7Q99871 368 aa23.18■■□□□ 1.3
ATG4B-226ENST00000625810 PAGR1Q9BTK6 254 aa23.18■■□□□ 1.3
ATG4B-226ENST00000625810 ARMT1Q9H993 441 aa23.18■■□□□ 1.3
ATG4B-226ENST00000625810 USP17L15C9J2P7 530 aa23.17■■□□□ 1.3
ATG4B-226ENST00000625810 USP17L13C9JLJ4 530 aa23.17■■□□□ 1.3
ATG4B-226ENST00000625810 USP17L11C9JVI0 530 aa23.17■■□□□ 1.3
ATG4B-226ENST00000625810 USP17L18D6R9N7 530 aa23.17■■□□□ 1.3
ATG4B-226ENST00000625810 USP17L22D6RA61 530 aa23.17■■□□□ 1.3
ATG4B-226ENST00000625810 USP17L17D6RBQ6 530 aa23.17■■□□□ 1.3
ATG4B-226ENST00000625810 USP17L19D6RCP7 530 aa23.17■■□□□ 1.3
ATG4B-226ENST00000625810 USP17L20D6RJB6 530 aa23.17■■□□□ 1.3
ATG4B-226ENST00000625810 MPHOSPH10O00566 681 aaKnown RBP23.17■■□□□ 1.3
ATG4B-226ENST00000625810 ADD2P35612 726 aa23.17■■□□□ 1.3
ATG4B-226ENST00000625810 USP17L24Q0WX57 530 aa23.17■■□□□ 1.3
ATG4B-226ENST00000625810 C12orf42Q96LP6 360 aa23.17■■□□□ 1.3
ATG4B-226ENST00000625810 NUDT12Q9BQG2 462 aa23.17■■□□□ 1.3
ATG4B-226ENST00000625810 DCP1AQ9NPI6 582 aaPredicted RBP23.17■■□□□ 1.3
ATG4B-226ENST00000625810 SMARCA5O60264 1052 aaPredicted RBP23.16■■□□□ 1.3
ATG4B-226ENST00000625810 CYP2B6P20813 491 aa23.16■■□□□ 1.3
ATG4B-226ENST00000625810 MAPK4P31152 587 aa23.16■■□□□ 1.3
ATG4B-226ENST00000625810 ERVK-9P63128 1117 aa23.16■■□□□ 1.3
ATG4B-226ENST00000625810 ERVK-24P63145 666 aa23.16■■□□□ 1.3
ATG4B-226ENST00000625810 GABPAQ06546 454 aa23.16■■□□□ 1.3
ATG4B-226ENST00000625810 Q3C1V9 767 aa23.16■■□□□ 1.3
ATG4B-226ENST00000625810 ACER1Q8TDN7 264 aa23.16■■□□□ 1.3
ATG4B-226ENST00000625810 KIAA1683Q9H0B3 1180 aa23.16■■□□□ 1.3
ATG4B-226ENST00000625810 CWC22Q9HCG8 908 aaKnown RBP23.16■■□□□ 1.3
ATG4B-226ENST00000625810 RBM27Q9P2N5 1060 aaKnown RBP23.16■■□□□ 1.3
ATG4B-226ENST00000625810 NR2E3Q9Y5X4 410 aa23.16■■□□□ 1.3
ATG4B-226ENST00000625810 RPTORQ8N122 1335 aa23.15■■□□□ 1.3
ATG4B-226ENST00000625810 MBD4O95243 580 aa23.15■■□□□ 1.3
ATG4B-226ENST00000625810 SLFNL1Q499Z3 407 aa23.15■■□□□ 1.3
ATG4B-226ENST00000625810 DIS3LQ8TF46 1054 aaKnown RBP23.15■■□□□ 1.3
ATG4B-226ENST00000625810 SOCS4Q8WXH5 440 aa23.15■■□□□ 1.3
ATG4B-226ENST00000625810 PORCNQ9H237 461 aa23.15■■□□□ 1.3
ATG4B-226ENST00000625810 CYP2D6P10635 497 aa23.14■■□□□ 1.29
ATG4B-226ENST00000625810 EVX2Q03828 476 aa23.14■■□□□ 1.29
ATG4B-226ENST00000625810 SEPT2Q15019 361 aa23.14■■□□□ 1.29
ATG4B-226ENST00000625810 MAP3K21Q5TCX8 1036 aa23.14■■□□□ 1.29
ATG4B-226ENST00000625810 CATSPERGQ6ZRH7 1159 aa23.14■■□□□ 1.29
ATG4B-226ENST00000625810 PAWRQ96IZ0 340 aaKnown RBP23.14■■□□□ 1.29
ATG4B-226ENST00000625810 PRO3102Q9H379 93 aa23.14■■□□□ 1.29
ATG4B-226ENST00000625810 HMX1Q9NP08 348 aaPredicted RBP23.14■■□□□ 1.29
ATG4B-226ENST00000625810 ATP8A2Q9NTI2 1148 aa23.14■■□□□ 1.29
ATG4B-226ENST00000625810 SZT2Q5T011 3432 aa23.14■■□□□ 1.29
ATG4B-226ENST00000625810 PRKAB2O43741 272 aa23.13■■□□□ 1.29
ATG4B-226ENST00000625810 XRCC5P13010 732 aaKnown RBP23.13■■□□□ 1.29
ATG4B-226ENST00000625810 VCAM1P19320 739 aa23.13■■□□□ 1.29
ATG4B-226ENST00000625810 GUCY1A2P33402 732 aa23.13■■□□□ 1.29
ATG4B-226ENST00000625810 ZSCAN25Q6NSZ9 544 aa23.13■■□□□ 1.29
ATG4B-226ENST00000625810 AMOTL1Q8IY63 956 aa23.13■■□□□ 1.29
ATG4B-226ENST00000625810 USP6NLQ92738 828 aa23.13■■□□□ 1.29
ATG4B-226ENST00000625810 DDRGK1Q96HY6 314 aa23.13■■□□□ 1.29
ATG4B-226ENST00000625810 SWAP70Q9UH65 585 aa23.13■■□□□ 1.29
ATG4B-226ENST00000625810 RABGAP1Q9Y3P9 1069 aa23.13■■□□□ 1.29
ATG4B-226ENST00000625810 EVI5O60447 810 aa23.12■■□□□ 1.29
ATG4B-226ENST00000625810 CNMDO75829 334 aa23.12■■□□□ 1.29
ATG4B-226ENST00000625810 CCNA1P78396 465 aa23.12■■□□□ 1.29
ATG4B-226ENST00000625810 UBE3CQ15386 1083 aa23.12■■□□□ 1.29
ATG4B-226ENST00000625810 GPR142Q7Z601 462 aa23.12■■□□□ 1.29
ATG4B-226ENST00000625810 PLEKHH3Q7Z736 793 aa23.12■■□□□ 1.29
ATG4B-226ENST00000625810 ANKLE1Q8NAG6 615 aa23.12■■□□□ 1.29
ATG4B-226ENST00000625810 MYH7P12883 1935 aa23.12■■□□□ 1.29
ATG4B-226ENST00000625810 ALPK3Q96L96 1907 aa23.12■■□□□ 1.29
ATG4B-226ENST00000625810 PRKAR2AP13861 404 aaKnown RBP23.11■■□□□ 1.29
ATG4B-226ENST00000625810 MNX1P50219 401 aaPredicted RBP23.11■■□□□ 1.29
ATG4B-226ENST00000625810 MORN1Q5T089 497 aa23.11■■□□□ 1.29
ATG4B-226ENST00000625810 NECAB2Q7Z6G3 386 aa23.11■■□□□ 1.29
ATG4B-226ENST00000625810 SLC44A5Q8NCS7 719 aa23.11■■□□□ 1.29
ATG4B-226ENST00000625810 DYNLL2Q96FJ2 89 aa23.11■■□□□ 1.29
ATG4B-226ENST00000625810 RPAP3Q9H6T3 665 aaPredicted RBP23.11■■□□□ 1.29
ATG4B-226ENST00000625810 ECHDC1Q9NTX5 307 aa23.11■■□□□ 1.29
ATG4B-226ENST00000625810 BAZ2AQ9UIF9 1905 aaKnown RBP23.1■■□□□ 1.29
ATG4B-226ENST00000625810 WDR78Q5VTH9 848 aa23.1■■□□□ 1.29
ATG4B-226ENST00000625810 TMEM179Q6ZVK1 233 aa23.1■■□□□ 1.29
ATG4B-226ENST00000625810 TRMT44Q8IYL2 757 aaKnown RBP23.1■■□□□ 1.29
ATG4B-226ENST00000625810 GPATCH3Q96I76 525 aa23.1■■□□□ 1.29
ATG4B-226ENST00000625810 DCTPP1Q9H773 170 aa23.1■■□□□ 1.29
ATG4B-226ENST00000625810 MYH8P13535 1937 aa23.1■■□□□ 1.29
ATG4B-226ENST00000625810 GLRX3O76003 335 aaKnown RBP23.09■■□□□ 1.29
ATG4B-226ENST00000625810 CHGBP05060 677 aa23.09■■□□□ 1.29
ATG4B-226ENST00000625810 ZKSCAN1P17029 563 aaPredicted RBP23.09■■□□□ 1.29
ATG4B-226ENST00000625810 RGS2P41220 211 aa23.09■■□□□ 1.29
ATG4B-226ENST00000625810 CCL14Q16627 93 aa23.09■■□□□ 1.29
ATG4B-226ENST00000625810 OGDHLQ9ULD0 1010 aa23.09■■□□□ 1.29
ATG4B-226ENST00000625810 SLC4A4Q9Y6R1 1079 aa23.09■■□□□ 1.29
ATG4B-226ENST00000625810 A0A1W2PRG0 241 aa23.08■■□□□ 1.29
ATG4B-226ENST00000625810 USP17L12C9JPN9 530 aa23.08■■□□□ 1.29
ATG4B-226ENST00000625810 USP17L21D6R901 530 aa23.08■■□□□ 1.29
ATG4B-226ENST00000625810 CACNB2Q08289 660 aaPredicted RBP23.08■■□□□ 1.29
ATG4B-226ENST00000625810 C12orf60Q5U649 245 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms