RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 RASGRP2Q7LDG7 609 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 CATIPQ7Z7H3 387 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 DGKHQ86XP1 1220 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 TMEM47Q9BQJ4 181 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 MTMR7Q9Y216 660 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 PLIN4Q96Q06 1357 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 IGKV6D-41A0A0C4DH26 115 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 GRIN3BO60391 1043 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 TROAPQ12815 778 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 RTN1Q16799 776 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 CERKLQ49MI3 558 aaPredicted RBP21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 TATDN1Q6P1N9 297 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 MIGA2Q7L4E1 593 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 PHKBQ93100 1093 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 KAT14Q9H8E8 782 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 NID2Q14112 1375 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 CPLX1O14810 134 aa21.71■■□□□ 1.07
SEMA6C-210ENST00000621728 FDPSP14324 419 aaKnown RBP21.71■■□□□ 1.07
SEMA6C-210ENST00000621728 NT5C2P49902 561 aa21.71■■□□□ 1.07
SEMA6C-210ENST00000621728 NTRK3Q16288 839 aa21.71■■□□□ 1.07
SEMA6C-210ENST00000621728 FANCBQ8NB91 859 aa21.71■■□□□ 1.07
SEMA6C-210ENST00000621728 ANKS1AQ92625 1134 aa21.71■■□□□ 1.07
SEMA6C-210ENST00000621728 TNPO1Q92973 898 aaKnown RBP21.71■■□□□ 1.07
SEMA6C-210ENST00000621728 TEPSINQ96N21 525 aa21.71■■□□□ 1.07
SEMA6C-210ENST00000621728 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.71■■□□□ 1.07
SEMA6C-210ENST00000621728 UBE2Q2LH0YL09 131 aa21.7■■□□□ 1.07
SEMA6C-210ENST00000621728 CCDC82Q8N4S0 544 aa21.7■■□□□ 1.07
SEMA6C-210ENST00000621728 PNMA1Q8ND90 353 aa21.7■■□□□ 1.07
SEMA6C-210ENST00000621728 TNNI2P48788 182 aa21.7■■□□□ 1.06
SEMA6C-210ENST00000621728 NUCB2P80303 420 aa21.7■■□□□ 1.06
SEMA6C-210ENST00000621728 MTMR4Q9NYA4 1195 aa21.7■■□□□ 1.06
SEMA6C-210ENST00000621728 GGA3Q9NZ52 723 aa21.7■■□□□ 1.06
SEMA6C-210ENST00000621728 POLR2AP24928 1970 aaKnown RBP21.7■■□□□ 1.06
SEMA6C-210ENST00000621728 BRD1O95696 1058 aa21.69■■□□□ 1.06
SEMA6C-210ENST00000621728 PRAMEF18Q5VWM3 479 aa21.69■■□□□ 1.06
SEMA6C-210ENST00000621728 LARP1BQ659C4 914 aaKnown RBP21.69■■□□□ 1.06
SEMA6C-210ENST00000621728 CHAMP1Q96JM3 812 aa21.69■■□□□ 1.06
SEMA6C-210ENST00000621728 DEFB129Q9H1M3 183 aa21.69■■□□□ 1.06
SEMA6C-210ENST00000621728 STX6O43752 255 aa21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 DHX16O60231 1041 aaKnown RBP21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 DDAH1O94760 285 aa21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 PLEKHA8P1O95397 391 aa21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 LMOD1P29536 600 aaPredicted RBP21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 CCDC178Q5BJE1 867 aa21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 HERC5Q9UII4 1024 aaKnown RBP21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 TAOK2Q9UL54 1235 aa21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 MYH4Q9Y623 1939 aa21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 GUCY1A2P33402 732 aa21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 NOVP48745 357 aa21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 TNFAIP1Q13829 316 aa21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 LRRC47Q8N1G4 583 aaKnown RBP21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 FAM184AQ8NB25 1140 aa21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 CCDC17Q96LX7 622 aa21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 ORC3Q9UBD5 711 aaPredicted RBP21.68■■□□□ 1.06
SEMA6C-210ENST00000621728 VPS37CA5D8V6 355 aaPredicted RBP21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 RCAN1P53805 252 aa21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 SEPT2Q15019 361 aa21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 AIFM3Q96NN9 605 aa21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 ADARB2Q9NS39 739 aaKnown RBP21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 CLIP2Q9UDT6 1046 aa21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 MTMR6Q9Y217 621 aa21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 GH2P01242 217 aa21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 HMGN5P82970 282 aaKnown RBP21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 ATP2B2Q01814 1243 aa21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 ABCB5Q2M3G0 1257 aa21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 DPY19L2Q6NUT2 758 aa21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 DLK2Q6UY11 383 aa21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 CDC37L1Q7L3B6 337 aa21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 GJB4Q9NTQ9 266 aa21.67■■□□□ 1.06
SEMA6C-210ENST00000621728 NBPF12Q5TAG4 269 aaPredicted RBP21.66■■□□□ 1.06
SEMA6C-210ENST00000621728 NBPF11Q86T75 865 aa21.66■■□□□ 1.06
SEMA6C-210ENST00000621728 STAG2Q8N3U4 1231 aa21.66■■□□□ 1.06
SEMA6C-210ENST00000621728 SLC26A6Q9BXS9 759 aa21.66■■□□□ 1.06
SEMA6C-210ENST00000621728 CALM1P0DP23 149 aa21.65■■□□□ 1.06
SEMA6C-210ENST00000621728 CALM2P0DP24 149 aa21.65■■□□□ 1.06
SEMA6C-210ENST00000621728 CALM3P0DP25 149 aa21.65■■□□□ 1.06
SEMA6C-210ENST00000621728 TOP1P11387 765 aaKnown RBP21.65■■□□□ 1.06
SEMA6C-210ENST00000621728 GUCY1B3Q02153 619 aa21.65■■□□□ 1.06
SEMA6C-210ENST00000621728 hCG_1642624A0A1W2PR95 340 aa21.65■■□□□ 1.06
SEMA6C-210ENST00000621728 ZSCAN22P10073 491 aaPredicted RBP21.65■■□□□ 1.06
SEMA6C-210ENST00000621728 IFNAR1P17181 557 aa21.65■■□□□ 1.06
SEMA6C-210ENST00000621728 FOXD4L6Q3SYB3 417 aaPredicted RBP21.65■■□□□ 1.06
SEMA6C-210ENST00000621728 OTUD7BQ6GQQ9 843 aa21.65■■□□□ 1.06
SEMA6C-210ENST00000621728 CPLX2Q6PUV4 134 aaKnown RBP21.65■■□□□ 1.06
SEMA6C-210ENST00000621728 FOXD4L3Q6VB84 417 aaPredicted RBP21.65■■□□□ 1.06
SEMA6C-210ENST00000621728 CTCFLQ8NI51 663 aaPredicted RBP21.65■■□□□ 1.06
SEMA6C-210ENST00000621728 WDR33Q9C0J8 1336 aaKnown RBP21.64■■□□□ 1.06
SEMA6C-210ENST00000621728 MYH6P13533 1939 aa21.64■■□□□ 1.05
SEMA6C-210ENST00000621728 GLTPD2A6NH11 291 aa21.64■■□□□ 1.05
SEMA6C-210ENST00000621728 TTLL1O95922 423 aa21.64■■□□□ 1.05
SEMA6C-210ENST00000621728 GOLGA8HP0CJ92 632 aa21.64■■□□□ 1.05
SEMA6C-210ENST00000621728 FUT2Q10981 343 aa21.64■■□□□ 1.05
SEMA6C-210ENST00000621728 TMTC3Q6ZXV5 915 aa21.64■■□□□ 1.05
SEMA6C-210ENST00000621728 SIAH1Q8IUQ4 282 aa21.64■■□□□ 1.05
SEMA6C-210ENST00000621728 APOBEC3FQ8IUX4 373 aaKnown RBP21.64■■□□□ 1.05
SEMA6C-210ENST00000621728 SRBD1Q8N5C6 995 aaKnown RBP21.64■■□□□ 1.05
SEMA6C-210ENST00000621728 L3MBTL3Q96JM7 780 aaPredicted RBP21.64■■□□□ 1.05
SEMA6C-210ENST00000621728 FZD1Q9UP38 647 aa21.64■■□□□ 1.05
SEMA6C-210ENST00000621728 BAZ2BQ9UIF8 2168 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms