RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 CCNA1P78396 465 aa11.65□□□□□ -0.54
TARDBP-218ENST00000617172 LRRFIP1Q32MZ4 808 aaKnown RBP11.65□□□□□ -0.54
TARDBP-218ENST00000617172 CATSPERGQ6ZRH7 1159 aa11.65□□□□□ -0.54
TARDBP-218ENST00000617172 TMEM179Q6ZVK1 233 aa11.65□□□□□ -0.54
TARDBP-218ENST00000617172 TRMT44Q8IYL2 757 aaKnown RBP11.65□□□□□ -0.54
TARDBP-218ENST00000617172 U2AF1L4Q8WU68 220 aaKnown RBP11.65□□□□□ -0.54
TARDBP-218ENST00000617172 SOCS4Q8WXH5 440 aa11.65□□□□□ -0.54
TARDBP-218ENST00000617172 NUDT12Q9BQG2 462 aa11.65□□□□□ -0.54
TARDBP-218ENST00000617172 RBPJLQ9UBG7 517 aa11.65□□□□□ -0.54
TARDBP-218ENST00000617172 RABGAP1Q9Y3P9 1069 aa11.65□□□□□ -0.54
TARDBP-218ENST00000617172 MPHOSPH10O00566 681 aaKnown RBP11.64□□□□□ -0.55
TARDBP-218ENST00000617172 GLRX3O76003 335 aaKnown RBP11.64□□□□□ -0.55
TARDBP-218ENST00000617172 SLC34A2O95436 690 aa11.64□□□□□ -0.55
TARDBP-218ENST00000617172 HMGCRP04035 888 aa11.64□□□□□ -0.55
TARDBP-218ENST00000617172 SEPT2Q15019 361 aa11.64□□□□□ -0.55
TARDBP-218ENST00000617172 C12orf60Q5U649 245 aa11.64□□□□□ -0.55
TARDBP-218ENST00000617172 LBX2Q6XYB7 198 aa11.64□□□□□ -0.55
TARDBP-218ENST00000617172 HTATIP2Q9BUP3 242 aa11.64□□□□□ -0.55
TARDBP-218ENST00000617172 UNC93B1Q9H1C4 597 aa11.64□□□□□ -0.55
TARDBP-218ENST00000617172 SH2D4AQ9H788 454 aa11.64□□□□□ -0.55
TARDBP-218ENST00000617172 TXNRD2Q9NNW7 524 aa11.64□□□□□ -0.55
TARDBP-218ENST00000617172 HOXC10Q9NYD6 342 aa11.64□□□□□ -0.55
TARDBP-218ENST00000617172 PTPRFP10586 1907 aa11.63□□□□□ -0.55
TARDBP-218ENST00000617172 USP17L12C9JPN9 530 aa11.63□□□□□ -0.55
TARDBP-218ENST00000617172 USP17L21D6R901 530 aa11.63□□□□□ -0.55
TARDBP-218ENST00000617172 ERC2O15083 957 aa11.63□□□□□ -0.55
TARDBP-218ENST00000617172 PRKAB2O43741 272 aa11.63□□□□□ -0.55
TARDBP-218ENST00000617172 TFRCP02786 760 aaKnown RBP11.63□□□□□ -0.55
TARDBP-218ENST00000617172 ZFYP08048 801 aaPredicted RBP11.63□□□□□ -0.55
TARDBP-218ENST00000617172 VCAM1P19320 739 aa11.63□□□□□ -0.55
TARDBP-218ENST00000617172 GUCY1A2P33402 732 aa11.63□□□□□ -0.55
TARDBP-218ENST00000617172 ZYXQ15942 572 aaKnown RBP11.63□□□□□ -0.55
TARDBP-218ENST00000617172 GIMAP6Q6P9H5 292 aa11.63□□□□□ -0.55
TARDBP-218ENST00000617172 KBTBD3Q8NAB2 608 aa11.63□□□□□ -0.55
TARDBP-218ENST00000617172 ACER1Q8TDN7 264 aa11.63□□□□□ -0.55
TARDBP-218ENST00000617172 LPAR1Q92633 364 aa11.63□□□□□ -0.55
TARDBP-218ENST00000617172 SHISA4Q96DD7 197 aa11.63□□□□□ -0.55
TARDBP-218ENST00000617172 PAK6Q9NQU5 681 aaPredicted RBP11.63□□□□□ -0.55
TARDBP-218ENST00000617172 SLC4A4Q9Y6R1 1079 aa11.63□□□□□ -0.55
TARDBP-218ENST00000617172 RBBP6Q7Z6E9 1792 aaKnown RBP11.63□□□□□ -0.55
TARDBP-218ENST00000617172 RPTORQ8N122 1335 aa11.62□□□□□ -0.55
TARDBP-218ENST00000617172 LOC285556D6RIA3 1793 aa11.62□□□□□ -0.55
TARDBP-218ENST00000617172 CDK8P49336 464 aa11.62□□□□□ -0.55
TARDBP-218ENST00000617172 COG2Q14746 738 aa11.62□□□□□ -0.55
TARDBP-218ENST00000617172 Q3C1V9 767 aa11.62□□□□□ -0.55
TARDBP-218ENST00000617172 PLEKHH3Q7Z736 793 aa11.62□□□□□ -0.55
TARDBP-218ENST00000617172 UBE2Q1Q7Z7E8 422 aa11.62□□□□□ -0.55
TARDBP-218ENST00000617172 DEFB118Q96PH6 123 aa11.62□□□□□ -0.55
TARDBP-218ENST00000617172 PAGR1Q9BTK6 254 aa11.62□□□□□ -0.55
TARDBP-218ENST00000617172 PUS7LQ9H0K6 701 aaKnown RBP11.62□□□□□ -0.55
TARDBP-218ENST00000617172 ARHGEF10LQ9HCE6 1279 aa11.62□□□□□ -0.55
TARDBP-218ENST00000617172 CWC22Q9HCG8 908 aaKnown RBP11.62□□□□□ -0.55
TARDBP-218ENST00000617172 HMX1Q9NP08 348 aaPredicted RBP11.62□□□□□ -0.55
TARDBP-218ENST00000617172 ZBTB47Q9UFB7 747 aaPredicted RBP11.62□□□□□ -0.55
TARDBP-218ENST00000617172 SIPA1L1O43166 1804 aa11.62□□□□□ -0.55
TARDBP-218ENST00000617172 FOCADQ5VW36 1801 aa11.62□□□□□ -0.55
TARDBP-218ENST00000617172 TTC41PQ6P2S7 1318 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 MYO5AQ9Y4I1 1855 aaKnown RBP11.61□□□□□ -0.55
TARDBP-218ENST00000617172 ZSWIM8A7E2V4 1837 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 RNF113AO15541 343 aaKnown RBP11.61□□□□□ -0.55
TARDBP-218ENST00000617172 FARP2O94887 1054 aaPredicted RBP11.61□□□□□ -0.55
TARDBP-218ENST00000617172 CYP2D6P10635 497 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 GNAT2P19087 354 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 CYP2B6P20813 491 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 RGS2P41220 211 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 RRP1P56182 461 aaKnown RBP11.61□□□□□ -0.55
TARDBP-218ENST00000617172 AAMPQ13685 434 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 SBK1Q52WX2 424 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 CTR9Q6PD62 1173 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 C16orf86Q6ZW13 317 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 GPR142Q7Z601 462 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 ANKLE1Q8NAG6 615 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 APPBP2Q92624 585 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 DPF3Q92784 378 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 DYNLL2Q96FJ2 89 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 STRBPQ96SI9 672 aaKnown RBP11.61□□□□□ -0.55
TARDBP-218ENST00000617172 CRISPLD2Q9H0B8 497 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 PORCNQ9H237 461 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 RPAP3Q9H6T3 665 aaPredicted RBP11.61□□□□□ -0.55
TARDBP-218ENST00000617172 KANSL2Q9H9L4 492 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 ARPP21Q9UBL0 812 aaPredicted RBP11.61□□□□□ -0.55
TARDBP-218ENST00000617172 TMX2Q9Y320 296 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 PCDHB15Q9Y5E8 787 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 IVNS1ABPQ9Y6Y0 642 aa11.61□□□□□ -0.55
TARDBP-218ENST00000617172 A0A1W2PRG0 241 aa11.6□□□□□ -0.55
TARDBP-218ENST00000617172 SLC15A5A6NIM6 579 aa11.6□□□□□ -0.55
TARDBP-218ENST00000617172 STRNO43815 780 aa11.6□□□□□ -0.55
TARDBP-218ENST00000617172 ICA1Q05084 483 aa11.6□□□□□ -0.55
TARDBP-218ENST00000617172 MORN1Q5T089 497 aa11.6□□□□□ -0.55
TARDBP-218ENST00000617172 POTEEQ6S8J3 1075 aa11.6□□□□□ -0.55
TARDBP-218ENST00000617172 MB21D1Q8N884 522 aa11.6□□□□□ -0.55
TARDBP-218ENST00000617172 SLC44A5Q8NCS7 719 aa11.6□□□□□ -0.55
TARDBP-218ENST00000617172 USP6NLQ92738 828 aa11.6□□□□□ -0.55
TARDBP-218ENST00000617172 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.6□□□□□ -0.55
TARDBP-218ENST00000617172 ZNF287Q9HBT7 754 aa11.6□□□□□ -0.55
TARDBP-218ENST00000617172 NR2E3Q9Y5X4 410 aa11.6□□□□□ -0.55
TARDBP-218ENST00000617172 ATAD5Q96QE3 1844 aa11.6□□□□□ -0.55
TARDBP-218ENST00000617172 CDK5RAP2Q96SN8 1893 aa11.59□□□□□ -0.55
TARDBP-218ENST00000617172 MYH1P12882 1939 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms