RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 RBPJLQ9UBG7 517 aa21.58■■□□□ 1.05
CHMP2A-203ENST00000597209 CENPFP49454 3210 aa21.57■■□□□ 1.04
CHMP2A-203ENST00000597209 MYCP01106 439 aaPredicted RBP21.57■■□□□ 1.04
CHMP2A-203ENST00000597209 SEPT2Q15019 361 aa21.57■■□□□ 1.04
CHMP2A-203ENST00000597209 GPRC5AQ8NFJ5 357 aa21.57■■□□□ 1.04
CHMP2A-203ENST00000597209 ACER1Q8TDN7 264 aa21.57■■□□□ 1.04
CHMP2A-203ENST00000597209 CRBNQ96SW2 442 aa21.57■■□□□ 1.04
CHMP2A-203ENST00000597209 BIN2Q9UBW5 565 aaPredicted RBP21.57■■□□□ 1.04
CHMP2A-203ENST00000597209 GJD2Q9UKL4 321 aa21.57■■□□□ 1.04
CHMP2A-203ENST00000597209 SLC4A4Q9Y6R1 1079 aa21.57■■□□□ 1.04
CHMP2A-203ENST00000597209 USP17L12C9JPN9 530 aa21.56■■□□□ 1.04
CHMP2A-203ENST00000597209 USP17L21D6R901 530 aa21.56■■□□□ 1.04
CHMP2A-203ENST00000597209 ERC2O15083 957 aa21.56■■□□□ 1.04
CHMP2A-203ENST00000597209 GJB1P08034 283 aa21.56■■□□□ 1.04
CHMP2A-203ENST00000597209 ZFYP08048 801 aaPredicted RBP21.56■■□□□ 1.04
CHMP2A-203ENST00000597209 CCL5P13501 91 aa21.56■■□□□ 1.04
CHMP2A-203ENST00000597209 CATSPERGQ6ZRH7 1159 aa21.56■■□□□ 1.04
CHMP2A-203ENST00000597209 TMEM179Q6ZVK1 233 aa21.56■■□□□ 1.04
CHMP2A-203ENST00000597209 CCDC17Q96LX7 622 aa21.56■■□□□ 1.04
CHMP2A-203ENST00000597209 STRBPQ96SI9 672 aaKnown RBP21.56■■□□□ 1.04
CHMP2A-203ENST00000597209 TXNRD2Q9NNW7 524 aa21.56■■□□□ 1.04
CHMP2A-203ENST00000597209 BAZ2AQ9UIF9 1905 aaKnown RBP21.55■■□□□ 1.04
CHMP2A-203ENST00000597209 DOCK3Q8IZD9 2030 aa21.55■■□□□ 1.04
CHMP2A-203ENST00000597209 RNF113AO15541 343 aaKnown RBP21.55■■□□□ 1.04
CHMP2A-203ENST00000597209 CAPN2P17655 700 aa21.55■■□□□ 1.04
CHMP2A-203ENST00000597209 AAMPQ13685 434 aa21.55■■□□□ 1.04
CHMP2A-203ENST00000597209 LRRFIP1Q32MZ4 808 aaKnown RBP21.55■■□□□ 1.04
CHMP2A-203ENST00000597209 GIMAP6Q6P9H5 292 aa21.55■■□□□ 1.04
CHMP2A-203ENST00000597209 C16orf86Q6ZW13 317 aa21.55■■□□□ 1.04
CHMP2A-203ENST00000597209 SLC44A5Q8NCS7 719 aa21.55■■□□□ 1.04
CHMP2A-203ENST00000597209 APPBP2Q92624 585 aa21.55■■□□□ 1.04
CHMP2A-203ENST00000597209 DYNLL2Q96FJ2 89 aa21.55■■□□□ 1.04
CHMP2A-203ENST00000597209 MPHOSPH10O00566 681 aaKnown RBP21.54■■□□□ 1.04
CHMP2A-203ENST00000597209 GLRX3O76003 335 aaKnown RBP21.54■■□□□ 1.04
CHMP2A-203ENST00000597209 VCAM1P19320 739 aa21.54■■□□□ 1.04
CHMP2A-203ENST00000597209 GJA8P48165 433 aa21.54■■□□□ 1.04
CHMP2A-203ENST00000597209 CDK8P49336 464 aa21.54■■□□□ 1.04
CHMP2A-203ENST00000597209 ERVK-9P63128 1117 aa21.54■■□□□ 1.04
CHMP2A-203ENST00000597209 ERVK-24P63145 666 aa21.54■■□□□ 1.04
CHMP2A-203ENST00000597209 ZYXQ15942 572 aaKnown RBP21.54■■□□□ 1.04
CHMP2A-203ENST00000597209 TSHZ3Q63HK5 1081 aa21.54■■□□□ 1.04
CHMP2A-203ENST00000597209 CTR9Q6PD62 1173 aa21.54■■□□□ 1.04
CHMP2A-203ENST00000597209 LBX2Q6XYB7 198 aa21.54■■□□□ 1.04
CHMP2A-203ENST00000597209 PI4K2BQ8TCG2 481 aa21.54■■□□□ 1.04
CHMP2A-203ENST00000597209 YTHDC1Q96MU7 727 aaKnown RBP21.54■■□□□ 1.04
CHMP2A-203ENST00000597209 RNF208Q9H0X6 261 aa21.54■■□□□ 1.04
CHMP2A-203ENST00000597209 RABGAP1Q9Y3P9 1069 aa21.54■■□□□ 1.04
CHMP2A-203ENST00000597209 INHAP05111 366 aa21.53■■□□□ 1.04
CHMP2A-203ENST00000597209 ELNP15502 786 aa21.53■■□□□ 1.04
CHMP2A-203ENST00000597209 MAPK4P31152 587 aa21.53■■□□□ 1.04
CHMP2A-203ENST00000597209 HDAC1Q13547 482 aaPredicted RBP21.53■■□□□ 1.04
CHMP2A-203ENST00000597209 Q3C1V9 767 aa21.53■■□□□ 1.04
CHMP2A-203ENST00000597209 SBK1Q52WX2 424 aa21.53■■□□□ 1.04
CHMP2A-203ENST00000597209 POTEEQ6S8J3 1075 aa21.53■■□□□ 1.04
CHMP2A-203ENST00000597209 OSBP2Q969R2 916 aa21.53■■□□□ 1.04
CHMP2A-203ENST00000597209 GCC1Q96CN9 775 aa21.53■■□□□ 1.04
CHMP2A-203ENST00000597209 SHISA4Q96DD7 197 aa21.53■■□□□ 1.04
CHMP2A-203ENST00000597209 ARPP21Q9UBL0 812 aaPredicted RBP21.53■■□□□ 1.04
CHMP2A-203ENST00000597209 MYH8P13535 1937 aa21.53■■□□□ 1.04
CHMP2A-203ENST00000597209 CYP2D7A0A087X1C5 515 aa21.52■■□□□ 1.04
CHMP2A-203ENST00000597209 A0A1W2PRG0 241 aa21.52■■□□□ 1.04
CHMP2A-203ENST00000597209 UNC93B1Q9H1C4 597 aa21.52■■□□□ 1.04
CHMP2A-203ENST00000597209 PLXNB2O15031 1838 aa21.52■■□□□ 1.04
CHMP2A-203ENST00000597209 SALL3Q9BXA9 1300 aa21.52■■□□□ 1.03
CHMP2A-203ENST00000597209 GSG1L2A8MUP6 293 aa21.51■■□□□ 1.03
CHMP2A-203ENST00000597209 AKR1B1P15121 316 aa21.51■■□□□ 1.03
CHMP2A-203ENST00000597209 GNAT2P19087 354 aa21.51■■□□□ 1.03
CHMP2A-203ENST00000597209 MX1P20591 662 aa21.51■■□□□ 1.03
CHMP2A-203ENST00000597209 SOCS4Q8WXH5 440 aa21.51■■□□□ 1.03
CHMP2A-203ENST00000597209 RPAP3Q9H6T3 665 aaPredicted RBP21.51■■□□□ 1.03
CHMP2A-203ENST00000597209 TMX2Q9Y320 296 aa21.51■■□□□ 1.03
CHMP2A-203ENST00000597209 SMIM22K7EJ46 135 aa21.5■■□□□ 1.03
CHMP2A-203ENST00000597209 PEX10O60683 326 aa21.5■■□□□ 1.03
CHMP2A-203ENST00000597209 CNMDO75829 334 aa21.5■■□□□ 1.03
CHMP2A-203ENST00000597209 XRCC5P13010 732 aaKnown RBP21.5■■□□□ 1.03
CHMP2A-203ENST00000597209 SIAH1Q8IUQ4 282 aa21.5■■□□□ 1.03
CHMP2A-203ENST00000597209 OTUD7AQ8TE49 926 aaPredicted RBP21.5■■□□□ 1.03
CHMP2A-203ENST00000597209 NUDT12Q9BQG2 462 aa21.5■■□□□ 1.03
CHMP2A-203ENST00000597209 PAGR1Q9BTK6 254 aa21.5■■□□□ 1.03
CHMP2A-203ENST00000597209 SH2D4AQ9H788 454 aa21.5■■□□□ 1.03
CHMP2A-203ENST00000597209 ARHGEF10LQ9HCE6 1279 aa21.5■■□□□ 1.03
CHMP2A-203ENST00000597209 ZBTB47Q9UFB7 747 aaPredicted RBP21.5■■□□□ 1.03
CHMP2A-203ENST00000597209 GPAA1O43292 621 aa21.49■■□□□ 1.03
CHMP2A-203ENST00000597209 SGPL1O95470 568 aa21.49■■□□□ 1.03
CHMP2A-203ENST00000597209 HMGCRP04035 888 aa21.49■■□□□ 1.03
CHMP2A-203ENST00000597209 CCNA1P78396 465 aa21.49■■□□□ 1.03
CHMP2A-203ENST00000597209 ICA1Q05084 483 aa21.49■■□□□ 1.03
CHMP2A-203ENST00000597209 ANKRD45Q5TZF3 282 aa21.49■■□□□ 1.03
CHMP2A-203ENST00000597209 U2AF1L4Q8WU68 220 aaKnown RBP21.49■■□□□ 1.03
CHMP2A-203ENST00000597209 LPAR1Q92633 364 aa21.49■■□□□ 1.03
CHMP2A-203ENST00000597209 PORCNQ9H237 461 aa21.49■■□□□ 1.03
CHMP2A-203ENST00000597209 PAK6Q9NQU5 681 aaPredicted RBP21.49■■□□□ 1.03
CHMP2A-203ENST00000597209 HOXC10Q9NYD6 342 aa21.49■■□□□ 1.03
CHMP2A-203ENST00000597209 BRCA2P51587 3418 aa21.48■■□□□ 1.03
CHMP2A-203ENST00000597209 SPDYE16A6NNV3 312 aaPredicted RBP21.48■■□□□ 1.03
CHMP2A-203ENST00000597209 COG2Q14746 738 aa21.48■■□□□ 1.03
CHMP2A-203ENST00000597209 GPR142Q7Z601 462 aa21.48■■□□□ 1.03
CHMP2A-203ENST00000597209 PLEKHH3Q7Z736 793 aa21.48■■□□□ 1.03
CHMP2A-203ENST00000597209 UBE2Q1Q7Z7E8 422 aa21.48■■□□□ 1.03
CHMP2A-203ENST00000597209 CCAR1Q8IX12 1150 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms