RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 MEX3CQ5U5Q3 659 aaKnown RBP21.96■■□□□ 1.11
PRKCSH-209ENST00000589838 FILIP1Q7Z7B0 1213 aa21.96■■□□□ 1.11
PRKCSH-209ENST00000589838 RPGRQ92834 1020 aaKnown RBP21.96■■□□□ 1.11
PRKCSH-209ENST00000589838 GTF2F1P35269 517 aaKnown RBP eCLIP21.95■■□□□ 1.12e-6■■■■■ 33.5
PRKCSH-209ENST00000589838 HSP90AA2PQ14568 343 aaPredicted RBP21.95■■□□□ 1.1
PRKCSH-209ENST00000589838 BCL11BQ9C0K0 894 aaPredicted RBP21.95■■□□□ 1.1
PRKCSH-209ENST00000589838 IFNKQ9P0W0 207 aa21.95■■□□□ 1.1
PRKCSH-209ENST00000589838 DACH1Q9UI36 760 aa21.95■■□□□ 1.1
PRKCSH-209ENST00000589838 PCDHA5Q9Y5H7 936 aa21.95■■□□□ 1.1
PRKCSH-209ENST00000589838 ONECUT3O60422 494 aaPredicted RBP21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 PPP4CP60510 307 aa21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 MDM2Q00987 491 aaPredicted RBP21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 FAM47AQ5JRC9 791 aa21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 FERMT2Q96AC1 680 aa21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 MAP7D2Q96T17 732 aa21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 XPO4Q9C0E2 1151 aaKnown RBP21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 CNTNAP5Q8WYK1 1306 aa21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 POLR2DO15514 142 aaKnown RBP21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 NRDCO43847 1150 aa21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 SKILP12757 684 aa21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 ATP2B1P20020 1258 aa21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 POSTNQ15063 836 aa21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 C12orf60Q5U649 245 aa21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 ISM2Q6H9L7 571 aa21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 DGKHQ86XP1 1220 aa21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 TRIML1Q8N9V2 468 aa21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 CCDC150Q8NCX0 1101 aa21.94■■□□□ 1.1
PRKCSH-209ENST00000589838 CYP2D6P10635 497 aa21.93■■□□□ 1.1
PRKCSH-209ENST00000589838 ST5P78524 1137 aa21.93■■□□□ 1.1
PRKCSH-209ENST00000589838 CERKQ8TCT0 537 aa21.93■■□□□ 1.1
PRKCSH-209ENST00000589838 KAT14Q9H8E8 782 aa21.93■■□□□ 1.1
PRKCSH-209ENST00000589838 ATP2B4P23634 1241 aa21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 FANCCQ00597 558 aa21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 TPD52L1Q16890 204 aaPredicted RBP21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 SPECC1Q5M775 1068 aa21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 NT5DC1Q5TFE4 455 aa21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 MTERF4Q7Z6M4 381 aaKnown RBP21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 SRBD1Q8N5C6 995 aaKnown RBP21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 ANKS1AQ92625 1134 aa21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 SMARCE1Q969G3 411 aa21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 RBM17Q96I25 401 aaKnown RBP21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 MKRN1Q9UHC7 482 aaKnown RBP21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 SCG2P13521 617 aa21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 PRR5LQ6MZQ0 368 aa21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 MLKLQ8NB16 471 aa21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 CSRNP2Q9H175 543 aa21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 SERTAD1Q9UHV2 236 aa21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 JAG2Q9Y219 1238 aa21.92■■□□□ 1.1
PRKCSH-209ENST00000589838 ROBO3Q96MS0 1386 aa21.91■■□□□ 1.1
PRKCSH-209ENST00000589838 USP17L8P0C7I0 530 aa21.91■■□□□ 1.1
PRKCSH-209ENST00000589838 HMGB2P26583 209 aaKnown RBP21.91■■□□□ 1.1
PRKCSH-209ENST00000589838 LMOD1P29536 600 aaPredicted RBP21.91■■□□□ 1.1
PRKCSH-209ENST00000589838 TRAPPC10P48553 1259 aa21.91■■□□□ 1.1
PRKCSH-209ENST00000589838 GNAQP50148 359 aa21.91■■□□□ 1.1
PRKCSH-209ENST00000589838 FOXP4Q8IVH2 680 aaPredicted RBP21.91■■□□□ 1.1
PRKCSH-209ENST00000589838 SHISA4Q96DD7 197 aa21.91■■□□□ 1.1
PRKCSH-209ENST00000589838 ZNF287Q9HBT7 754 aa21.91■■□□□ 1.1
PRKCSH-209ENST00000589838 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 NMT2O60551 498 aa21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 CALML3P27482 149 aa21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 TFAP4Q01664 338 aa21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 GRIN1Q05586 938 aa21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 PFKFB3Q16875 520 aaPredicted RBP21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 MKNK2Q9HBH9 465 aa21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 KCND1Q9NSA2 647 aa21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 TCP11L1Q9NUJ3 509 aa21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 SARSP49591 514 aaKnown RBP21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 NLRP5P59047 1200 aa21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 CCZ1BP86790 482 aa21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 CCZ1P86791 482 aaPredicted RBP21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 CRY2Q49AN0 593 aa21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 CT47A1Q5JQC4 288 aaPredicted RBP21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 TMC6Q7Z403 805 aa21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 SH3RF3Q8TEJ3 882 aaPredicted RBP21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 TNFRSF25Q93038 417 aa21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 SH3GLB2Q9NR46 395 aa21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 MAN1B1Q9UKM7 699 aa21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 TRPC5Q9UL62 973 aaPredicted RBP21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 PAXBP1Q9Y5B6 917 aa21.9■■□□□ 1.1
PRKCSH-209ENST00000589838 UBR3Q6ZT12 1888 aa21.89■■□□□ 1.09
PRKCSH-209ENST00000589838 hCG_1642624A0A1W2PR95 340 aa21.89■■□□□ 1.09
PRKCSH-209ENST00000589838 BBOX1O75936 387 aa21.89■■□□□ 1.09
PRKCSH-209ENST00000589838 TNNT1P13805 278 aa21.89■■□□□ 1.09
PRKCSH-209ENST00000589838 TTC38Q5R3I4 469 aa21.89■■□□□ 1.09
PRKCSH-209ENST00000589838 RCSD1Q6JBY9 416 aa21.89■■□□□ 1.09
PRKCSH-209ENST00000589838 SEPT12Q8IYM1 358 aa21.89■■□□□ 1.09
PRKCSH-209ENST00000589838 PDCL3Q9H2J4 239 aa21.89■■□□□ 1.09
PRKCSH-209ENST00000589838 NAV1Q8NEY1 1877 aa21.89■■□□□ 1.09
PRKCSH-209ENST00000589838 ACTN4O43707 911 aaKnown RBP21.88■■□□□ 1.09
PRKCSH-209ENST00000589838 SERPINC1P01008 464 aa21.88■■□□□ 1.09
PRKCSH-209ENST00000589838 PLCG2P16885 1265 aa21.88■■□□□ 1.09
PRKCSH-209ENST00000589838 UBASH3AP57075 661 aa21.88■■□□□ 1.09
PRKCSH-209ENST00000589838 GPSM2P81274 684 aa21.88■■□□□ 1.09
PRKCSH-209ENST00000589838 EVX2Q03828 476 aa21.88■■□□□ 1.09
PRKCSH-209ENST00000589838 ARID5BQ14865 1188 aa21.88■■□□□ 1.09
PRKCSH-209ENST00000589838 SLF2Q8IX21 1173 aa21.88■■□□□ 1.09
PRKCSH-209ENST00000589838 ZNF444Q8N0Y2 327 aaPredicted RBP21.88■■□□□ 1.09
PRKCSH-209ENST00000589838 PYM1Q9BRP8 204 aaKnown RBP21.88■■□□□ 1.09
PRKCSH-209ENST00000589838 GGA1Q9UJY5 639 aa21.88■■□□□ 1.09
PRKCSH-209ENST00000589838 AFF2P51816 1311 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms