RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 GTF3C2Q8WUA4 911 aaPredicted RBP20.92■□□□□ 0.94
LITAF-211ENST00000572255 GCC1Q96CN9 775 aa20.92■□□□□ 0.94
LITAF-211ENST00000572255 MYH8P13535 1937 aa20.92■□□□□ 0.94
LITAF-211ENST00000572255 USP17L15C9J2P7 530 aa20.91■□□□□ 0.94
LITAF-211ENST00000572255 USP17L13C9JLJ4 530 aa20.91■□□□□ 0.94
LITAF-211ENST00000572255 USP17L11C9JVI0 530 aa20.91■□□□□ 0.94
LITAF-211ENST00000572255 USP17L18D6R9N7 530 aa20.91■□□□□ 0.94
LITAF-211ENST00000572255 USP17L22D6RA61 530 aa20.91■□□□□ 0.94
LITAF-211ENST00000572255 USP17L17D6RBQ6 530 aa20.91■□□□□ 0.94
LITAF-211ENST00000572255 USP17L19D6RCP7 530 aa20.91■□□□□ 0.94
LITAF-211ENST00000572255 USP17L20D6RJB6 530 aa20.91■□□□□ 0.94
LITAF-211ENST00000572255 CHGBP05060 677 aa20.91■□□□□ 0.94
LITAF-211ENST00000572255 USP17L24Q0WX57 530 aa20.91■□□□□ 0.94
LITAF-211ENST00000572255 UBE2Q1Q7Z7E8 422 aa20.91■□□□□ 0.94
LITAF-211ENST00000572255 PAGR1Q9BTK6 254 aa20.91■□□□□ 0.94
LITAF-211ENST00000572255 DCTPP1Q9H773 170 aa20.91■□□□□ 0.94
LITAF-211ENST00000572255 ATP8A2Q9NTI2 1148 aa20.91■□□□□ 0.94
LITAF-211ENST00000572255 MPHOSPH10O00566 681 aaKnown RBP20.9■□□□□ 0.94
LITAF-211ENST00000572255 SGPL1O95470 568 aa20.9■□□□□ 0.94
LITAF-211ENST00000572255 VCAM1P19320 739 aa20.9■□□□□ 0.94
LITAF-211ENST00000572255 ERVK-9P63128 1117 aa20.9■□□□□ 0.94
LITAF-211ENST00000572255 ERVK-24P63145 666 aa20.9■□□□□ 0.94
LITAF-211ENST00000572255 SEPT2Q15019 361 aa20.9■□□□□ 0.94
LITAF-211ENST00000572255 UBE3CQ15386 1083 aa20.9■□□□□ 0.94
LITAF-211ENST00000572255 POTEEQ6S8J3 1075 aa20.9■□□□□ 0.94
LITAF-211ENST00000572255 SLC44A5Q8NCS7 719 aa20.9■□□□□ 0.94
LITAF-211ENST00000572255 ECHDC1Q9NTX5 307 aa20.9■□□□□ 0.94
LITAF-211ENST00000572255 HMGCRP04035 888 aa20.89■□□□□ 0.93
LITAF-211ENST00000572255 MAPK4P31152 587 aa20.89■□□□□ 0.93
LITAF-211ENST00000572255 Q3C1V9 767 aa20.89■□□□□ 0.93
LITAF-211ENST00000572255 ZSCAN25Q6NSZ9 544 aa20.89■□□□□ 0.93
LITAF-211ENST00000572255 DYNLL2Q96FJ2 89 aa20.89■□□□□ 0.93
LITAF-211ENST00000572255 DEFB118Q96PH6 123 aa20.89■□□□□ 0.93
LITAF-211ENST00000572255 PAK6Q9NQU5 681 aaPredicted RBP20.89■□□□□ 0.93
LITAF-211ENST00000572255 SWAP70Q9UH65 585 aa20.89■□□□□ 0.93
LITAF-211ENST00000572255 FARP2O94887 1054 aaPredicted RBP20.88■□□□□ 0.93
LITAF-211ENST00000572255 CATSPERGQ6ZRH7 1159 aa20.88■□□□□ 0.93
LITAF-211ENST00000572255 NUDT12Q9BQG2 462 aa20.88■□□□□ 0.93
LITAF-211ENST00000572255 PORCNQ9H237 461 aa20.88■□□□□ 0.93
LITAF-211ENST00000572255 RABGAP1Q9Y3P9 1069 aa20.88■□□□□ 0.93
LITAF-211ENST00000572255 CCAR1Q8IX12 1150 aaKnown RBP20.87■□□□□ 0.93
LITAF-211ENST00000572255 SOCS4Q8WXH5 440 aa20.87■□□□□ 0.93
LITAF-211ENST00000572255 GPATCH3Q96I76 525 aa20.87■□□□□ 0.93
LITAF-211ENST00000572255 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.87■□□□□ 0.933e-7■■□□□ 13.1
LITAF-211ENST00000572255 CYP2D7A0A087X1C5 515 aa20.86■□□□□ 0.93
LITAF-211ENST00000572255 A0A1W2PRG0 241 aa20.86■□□□□ 0.93
LITAF-211ENST00000572255 CNMDO75829 334 aa20.86■□□□□ 0.93
LITAF-211ENST00000572255 TFRCP02786 760 aaKnown RBP20.86■□□□□ 0.93
LITAF-211ENST00000572255 CAPN2P17655 700 aa20.86■□□□□ 0.93
LITAF-211ENST00000572255 CYP2B6P20813 491 aa20.86■□□□□ 0.93
LITAF-211ENST00000572255 TRIM32Q13049 653 aa20.86■□□□□ 0.93
LITAF-211ENST00000572255 C12orf60Q5U649 245 aa20.86■□□□□ 0.93
LITAF-211ENST00000572255 TMEM179Q6ZVK1 233 aa20.86■□□□□ 0.93
LITAF-211ENST00000572255 AMOTL1Q8IY63 956 aa20.86■□□□□ 0.93
LITAF-211ENST00000572255 TRIB2Q92519 343 aa20.86■□□□□ 0.93
LITAF-211ENST00000572255 DDRGK1Q96HY6 314 aa20.86■□□□□ 0.93
LITAF-211ENST00000572255 HTATIP2Q9BUP3 242 aa20.86■□□□□ 0.93
LITAF-211ENST00000572255 PUS7LQ9H0K6 701 aaKnown RBP20.86■□□□□ 0.93
LITAF-211ENST00000572255 RPAP3Q9H6T3 665 aaPredicted RBP20.86■□□□□ 0.93
LITAF-211ENST00000572255 SLC4A4Q9Y6R1 1079 aa20.86■□□□□ 0.93
LITAF-211ENST00000572255 USP17L12C9JPN9 530 aa20.85■□□□□ 0.93
LITAF-211ENST00000572255 USP17L21D6R901 530 aa20.85■□□□□ 0.93
LITAF-211ENST00000572255 H0YGN5 161 aa20.85■□□□□ 0.93
LITAF-211ENST00000572255 SMIM22K7EJ46 135 aa20.85■□□□□ 0.93
LITAF-211ENST00000572255 XRCC5P13010 732 aaKnown RBP20.85■□□□□ 0.93
LITAF-211ENST00000572255 TSHZ3Q63HK5 1081 aa20.85■□□□□ 0.93
LITAF-211ENST00000572255 LBX2Q6XYB7 198 aa20.85■□□□□ 0.93
LITAF-211ENST00000572255 GPR142Q7Z601 462 aa20.85■□□□□ 0.93
LITAF-211ENST00000572255 PLEKHH3Q7Z736 793 aa20.85■□□□□ 0.93
LITAF-211ENST00000572255 DPF3Q92784 378 aa20.85■□□□□ 0.93
LITAF-211ENST00000572255 CRISPLD2Q9H0B8 497 aa20.85■□□□□ 0.93
LITAF-211ENST00000572255 PCDHB15Q9Y5E8 787 aa20.85■□□□□ 0.93
LITAF-211ENST00000572255 RPTORQ8N122 1335 aa20.84■□□□□ 0.93
LITAF-211ENST00000572255 AKR1B1P15121 316 aa20.84■□□□□ 0.93
LITAF-211ENST00000572255 CCNA1P78396 465 aa20.84■□□□□ 0.93
LITAF-211ENST00000572255 HABP4Q5JVS0 413 aaKnown RBP20.84■□□□□ 0.93
LITAF-211ENST00000572255 KBTBD3Q8NAB2 608 aa20.84■□□□□ 0.93
LITAF-211ENST00000572255 USP6NLQ92738 828 aa20.84■□□□□ 0.93
LITAF-211ENST00000572255 CWC22Q9HCG8 908 aaKnown RBP20.84■□□□□ 0.93
LITAF-211ENST00000572255 HMX1Q9NP08 348 aaPredicted RBP20.84■□□□□ 0.93
LITAF-211ENST00000572255 SPDYE16A6NNV3 312 aaPredicted RBP20.83■□□□□ 0.93
LITAF-211ENST00000572255 CDK8P49336 464 aa20.83■□□□□ 0.93
LITAF-211ENST00000572255 MORN1Q5T089 497 aa20.83■□□□□ 0.93
LITAF-211ENST00000572255 C16orf86Q6ZW13 317 aa20.83■□□□□ 0.93
LITAF-211ENST00000572255 CLEC10AQ8IUN9 316 aa20.83■□□□□ 0.93
LITAF-211ENST00000572255 CCDC17Q96LX7 622 aa20.83■□□□□ 0.93
LITAF-211ENST00000572255 BTBD7Q9P203 1132 aa20.83■□□□□ 0.93
LITAF-211ENST00000572255 ZKSCAN1P17029 563 aaPredicted RBP20.82■□□□□ 0.92
LITAF-211ENST00000572255 RGS2P41220 211 aa20.82■□□□□ 0.92
LITAF-211ENST00000572255 RRP1P56182 461 aaKnown RBP20.82■□□□□ 0.92
LITAF-211ENST00000572255 ICA1Q05084 483 aa20.82■□□□□ 0.92
LITAF-211ENST00000572255 MAP3K21Q5TCX8 1036 aa20.82■□□□□ 0.92
LITAF-211ENST00000572255 CTR9Q6PD62 1173 aa20.82■□□□□ 0.92
LITAF-211ENST00000572255 SIAH1Q8IUQ4 282 aa20.82■□□□□ 0.92
LITAF-211ENST00000572255 TRMT44Q8IYL2 757 aaKnown RBP20.82■□□□□ 0.92
LITAF-211ENST00000572255 STRBPQ96SI9 672 aaKnown RBP20.82■□□□□ 0.92
LITAF-211ENST00000572255 ARHGEF10LQ9HCE6 1279 aa20.82■□□□□ 0.92
LITAF-211ENST00000572255 RLFQ13129 1914 aa20.82■□□□□ 0.92
LITAF-211ENST00000572255 GLRX3O76003 335 aaKnown RBP20.81■□□□□ 0.92
LITAF-211ENST00000572255 PRKAR2AP13861 404 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms