RNA–Protein interactions for RNA: ENST00000561996.1

CPT1A-207, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 4

Gene CPT1A, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-207ENST00000561996 GJD2Q9UKL4 321 aa22.39■■□□□ 1.17
CPT1A-207ENST00000561996 MKI67P46013 3256 aaKnown RBP22.38■■□□□ 1.17
CPT1A-207ENST00000561996 ELNP15502 786 aa22.38■■□□□ 1.17
CPT1A-207ENST00000561996 MAPK4P31152 587 aa22.38■■□□□ 1.17
CPT1A-207ENST00000561996 SOCS4Q8WXH5 440 aa22.38■■□□□ 1.17
CPT1A-207ENST00000561996 RBPJLQ9UBG7 517 aa22.38■■□□□ 1.17
CPT1A-207ENST00000561996 NAV1Q8NEY1 1877 aa22.37■■□□□ 1.17
CPT1A-207ENST00000561996 ERVK-9P63128 1117 aa22.37■■□□□ 1.17
CPT1A-207ENST00000561996 ERVK-24P63145 666 aa22.37■■□□□ 1.17
CPT1A-207ENST00000561996 TMEM179Q6ZVK1 233 aa22.37■■□□□ 1.17
CPT1A-207ENST00000561996 U2AF1L4Q8WU68 220 aaKnown RBP22.37■■□□□ 1.17
CPT1A-207ENST00000561996 UNC93B1Q9H1C4 597 aa22.37■■□□□ 1.17
CPT1A-207ENST00000561996 TXNRD2Q9NNW7 524 aa22.37■■□□□ 1.17
CPT1A-207ENST00000561996 SGPL1O95470 568 aa22.36■■□□□ 1.17
CPT1A-207ENST00000561996 HMGCRP04035 888 aa22.36■■□□□ 1.17
CPT1A-207ENST00000561996 VCAM1P19320 739 aa22.36■■□□□ 1.17
CPT1A-207ENST00000561996 GUCY1A2P33402 732 aa22.36■■□□□ 1.17
CPT1A-207ENST00000561996 LBX2Q6XYB7 198 aa22.36■■□□□ 1.17
CPT1A-207ENST00000561996 CATSPERGQ6ZRH7 1159 aa22.36■■□□□ 1.17
CPT1A-207ENST00000561996 ACER1Q8TDN7 264 aa22.36■■□□□ 1.17
CPT1A-207ENST00000561996 RABGAP1Q9Y3P9 1069 aa22.36■■□□□ 1.17
CPT1A-207ENST00000561996 PRKAB2O43741 272 aa22.35■■□□□ 1.17
CPT1A-207ENST00000561996 XRCC5P13010 732 aaKnown RBP22.35■■□□□ 1.17
CPT1A-207ENST00000561996 SEPT2Q15019 361 aa22.35■■□□□ 1.17
CPT1A-207ENST00000561996 ZYXQ15942 572 aaKnown RBP22.35■■□□□ 1.17
CPT1A-207ENST00000561996 UBE2Q1Q7Z7E8 422 aa22.35■■□□□ 1.17
CPT1A-207ENST00000561996 CCAR1Q8IX12 1150 aaKnown RBP22.35■■□□□ 1.17
CPT1A-207ENST00000561996 KBTBD3Q8NAB2 608 aa22.35■■□□□ 1.17
CPT1A-207ENST00000561996 CCDC17Q96LX7 622 aa22.35■■□□□ 1.17
CPT1A-207ENST00000561996 NUDT12Q9BQG2 462 aa22.35■■□□□ 1.17
CPT1A-207ENST00000561996 PAK6Q9NQU5 681 aaPredicted RBP22.35■■□□□ 1.17
CPT1A-207ENST00000561996 MPHOSPH10O00566 681 aaKnown RBP22.34■■□□□ 1.17
CPT1A-207ENST00000561996 CYP2D6P10635 497 aa22.34■■□□□ 1.17
CPT1A-207ENST00000561996 CCNA1P78396 465 aa22.34■■□□□ 1.17
CPT1A-207ENST00000561996 C12orf60Q5U649 245 aa22.34■■□□□ 1.17
CPT1A-207ENST00000561996 TRMT44Q8IYL2 757 aaKnown RBP22.34■■□□□ 1.17
CPT1A-207ENST00000561996 SLC4A4Q9Y6R1 1079 aa22.34■■□□□ 1.17
CPT1A-207ENST00000561996 DOCK3Q8IZD9 2030 aa22.33■■□□□ 1.17
CPT1A-207ENST00000561996 ZFYP08048 801 aaPredicted RBP22.33■■□□□ 1.17
CPT1A-207ENST00000561996 RRP1P56182 461 aaKnown RBP22.33■■□□□ 1.17
CPT1A-207ENST00000561996 LRRFIP1Q32MZ4 808 aaKnown RBP22.33■■□□□ 1.17
CPT1A-207ENST00000561996 SLFNL1Q499Z3 407 aa22.33■■□□□ 1.17
CPT1A-207ENST00000561996 PAGR1Q9BTK6 254 aa22.33■■□□□ 1.17
CPT1A-207ENST00000561996 HTATIP2Q9BUP3 242 aa22.33■■□□□ 1.17
CPT1A-207ENST00000561996 TTC41PQ6P2S7 1318 aa22.32■■□□□ 1.16
CPT1A-207ENST00000561996 USP17L12C9JPN9 530 aa22.32■■□□□ 1.16
CPT1A-207ENST00000561996 USP17L21D6R901 530 aa22.32■■□□□ 1.16
CPT1A-207ENST00000561996 EVX2Q03828 476 aa22.32■■□□□ 1.16
CPT1A-207ENST00000561996 Q3C1V9 767 aa22.32■■□□□ 1.16
CPT1A-207ENST00000561996 GIMAP6Q6P9H5 292 aa22.32■■□□□ 1.16
CPT1A-207ENST00000561996 SLC44A5Q8NCS7 719 aa22.32■■□□□ 1.16
CPT1A-207ENST00000561996 PUS7LQ9H0K6 701 aaKnown RBP22.32■■□□□ 1.16
CPT1A-207ENST00000561996 SH2D4AQ9H788 454 aa22.32■■□□□ 1.16
CPT1A-207ENST00000561996 ARPP21Q9UBL0 812 aaPredicted RBP22.32■■□□□ 1.16
CPT1A-207ENST00000561996 PCDHB15Q9Y5E8 787 aa22.32■■□□□ 1.16
CPT1A-207ENST00000561996 ERC2O15083 957 aa22.31■■□□□ 1.16
CPT1A-207ENST00000561996 GLRX3O76003 335 aaKnown RBP22.31■■□□□ 1.16
CPT1A-207ENST00000561996 C16orf86Q6ZW13 317 aa22.31■■□□□ 1.16
CPT1A-207ENST00000561996 GPR142Q7Z601 462 aa22.31■■□□□ 1.16
CPT1A-207ENST00000561996 PLEKHH3Q7Z736 793 aa22.31■■□□□ 1.16
CPT1A-207ENST00000561996 APPBP2Q92624 585 aa22.31■■□□□ 1.16
CPT1A-207ENST00000561996 LPAR1Q92633 364 aa22.31■■□□□ 1.16
CPT1A-207ENST00000561996 DEFB118Q96PH6 123 aa22.31■■□□□ 1.16
CPT1A-207ENST00000561996 STRBPQ96SI9 672 aaKnown RBP22.31■■□□□ 1.16
CPT1A-207ENST00000561996 CRISPLD2Q9H0B8 497 aa22.31■■□□□ 1.16
CPT1A-207ENST00000561996 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.31■■□□□ 1.164e-8■■■■■ 61.3
CPT1A-207ENST00000561996 RPAP3Q9H6T3 665 aaPredicted RBP22.31■■□□□ 1.16
CPT1A-207ENST00000561996 ARHGEF10LQ9HCE6 1279 aa22.31■■□□□ 1.16
CPT1A-207ENST00000561996 RPTORQ8N122 1335 aa22.31■■□□□ 1.16
CPT1A-207ENST00000561996 A0A1W2PRG0 241 aa22.3■■□□□ 1.16
CPT1A-207ENST00000561996 FARP2O94887 1054 aaPredicted RBP22.3■■□□□ 1.16
CPT1A-207ENST00000561996 TFRCP02786 760 aaKnown RBP22.3■■□□□ 1.16
CPT1A-207ENST00000561996 CHGBP05060 677 aa22.3■■□□□ 1.16
CPT1A-207ENST00000561996 RGS2P41220 211 aa22.3■■□□□ 1.16
CPT1A-207ENST00000561996 CDK8P49336 464 aa22.3■■□□□ 1.16
CPT1A-207ENST00000561996 POTEEQ6S8J3 1075 aa22.3■■□□□ 1.16
CPT1A-207ENST00000561996 USP6NLQ92738 828 aa22.3■■□□□ 1.16
CPT1A-207ENST00000561996 DYNLL2Q96FJ2 89 aa22.3■■□□□ 1.16
CPT1A-207ENST00000561996 PORCNQ9H237 461 aa22.3■■□□□ 1.16
CPT1A-207ENST00000561996 HMX1Q9NP08 348 aaPredicted RBP22.3■■□□□ 1.16
CPT1A-207ENST00000561996 HOXC10Q9NYD6 342 aa22.3■■□□□ 1.16
CPT1A-207ENST00000561996 RNF113AO15541 343 aaKnown RBP22.29■■□□□ 1.16
CPT1A-207ENST00000561996 CNMDO75829 334 aa22.29■■□□□ 1.16
CPT1A-207ENST00000561996 AKR1B1P15121 316 aa22.29■■□□□ 1.16
CPT1A-207ENST00000561996 CYP2B6P20813 491 aa22.29■■□□□ 1.16
CPT1A-207ENST00000561996 ICA1Q05084 483 aa22.29■■□□□ 1.16
CPT1A-207ENST00000561996 COG2Q14746 738 aa22.29■■□□□ 1.16
CPT1A-207ENST00000561996 SBK1Q52WX2 424 aa22.29■■□□□ 1.16
CPT1A-207ENST00000561996 MORN1Q5T089 497 aa22.29■■□□□ 1.16
CPT1A-207ENST00000561996 CTR9Q6PD62 1173 aa22.29■■□□□ 1.16
CPT1A-207ENST00000561996 CWC22Q9HCG8 908 aaKnown RBP22.29■■□□□ 1.16
CPT1A-207ENST00000561996 TMX2Q9Y320 296 aa22.29■■□□□ 1.16
CPT1A-207ENST00000561996 SPDYE16A6NNV3 312 aaPredicted RBP22.28■■□□□ 1.16
CPT1A-207ENST00000561996 PEX10O60683 326 aa22.28■■□□□ 1.16
CPT1A-207ENST00000561996 GNAT2P19087 354 aa22.28■■□□□ 1.16
CPT1A-207ENST00000561996 ANKLE1Q8NAG6 615 aa22.28■■□□□ 1.16
CPT1A-207ENST00000561996 TRIB2Q92519 343 aa22.28■■□□□ 1.16
CPT1A-207ENST00000561996 MYH7P12883 1935 aa22.27■■□□□ 1.16
CPT1A-207ENST00000561996 CEP290O15078 2479 aa22.27■■□□□ 1.16
CPT1A-207ENST00000561996 ZKSCAN1P17029 563 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms