RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 HABP4Q5JVS0 413 aaKnown RBP8□□□□□ -1.13
SLIRP-203ENST00000554074 LBX2Q6XYB7 198 aa8□□□□□ -1.13
SLIRP-203ENST00000554074 TRMT44Q8IYL2 757 aaKnown RBP8□□□□□ -1.13
SLIRP-203ENST00000554074 GPRC5AQ8NFJ5 357 aa8□□□□□ -1.13
SLIRP-203ENST00000554074 P2RX7Q99572 595 aaKnown RBP8□□□□□ -1.13
SLIRP-203ENST00000554074 HAUS7Q99871 368 aa8□□□□□ -1.13
SLIRP-203ENST00000554074 HTATIP2Q9BUP3 242 aa8□□□□□ -1.13
SLIRP-203ENST00000554074 DDX24Q9GZR7 859 aaKnown RBP eCLIP8□□□□□ -1.13
SLIRP-203ENST00000554074 CABP5Q9NP86 173 aa8□□□□□ -1.13
SLIRP-203ENST00000554074 RBPJLQ9UBG7 517 aa8□□□□□ -1.13
SLIRP-203ENST00000554074 ZNF532Q9HCE3 1301 aa8□□□□□ -1.13
SLIRP-203ENST00000554074 USP17L15C9J2P7 530 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 USP17L13C9JLJ4 530 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 USP17L11C9JVI0 530 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 USP17L18D6R9N7 530 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 USP17L22D6RA61 530 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 USP17L17D6RBQ6 530 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 USP17L19D6RCP7 530 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 USP17L20D6RJB6 530 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 FARP2O94887 1054 aaPredicted RBP7.99□□□□□ -1.13
SLIRP-203ENST00000554074 POLR3DP05423 398 aaPredicted RBP7.99□□□□□ -1.13
SLIRP-203ENST00000554074 ADD2P35612 726 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 PLCD1P51178 756 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 ERVK-9P63128 1117 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 ERVK-24P63145 666 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 USP17L24Q0WX57 530 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 UBE3CQ15386 1083 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 ANKLE1Q8NAG6 615 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 DNAJC2Q99543 621 aaKnown RBP7.99□□□□□ -1.13
SLIRP-203ENST00000554074 FEZ1Q99689 392 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 NUDT12Q9BQG2 462 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 LRRCC1Q9C099 1032 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.99□□□□□ -1.13
SLIRP-203ENST00000554074 TXNRD2Q9NNW7 524 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 DCP1AQ9NPI6 582 aaPredicted RBP7.99□□□□□ -1.13
SLIRP-203ENST00000554074 ATP8A2Q9NTI2 1148 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 PAG1Q9NWQ8 432 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 MCM9Q9NXL9 1143 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 SWAP70Q9UH65 585 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 RABGAP1Q9Y3P9 1069 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 RPTORQ8N122 1335 aa7.99□□□□□ -1.13
SLIRP-203ENST00000554074 APBB1O00213 710 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 VCAM1P19320 739 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 GUCY1A2P33402 732 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 CCNA1P78396 465 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 RAB3GAP1Q15042 981 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 MORN1Q5T089 497 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 MAP3K21Q5TCX8 1036 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 ZSCAN25Q6NSZ9 544 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 POTEEQ6S8J3 1075 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 CATSPERGQ6ZRH7 1159 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 TMEM179Q6ZVK1 233 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 LCORLQ8N3X6 602 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 USP6NLQ92738 828 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 DEFB118Q96PH6 123 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 BOLA2Q9H3K6 86 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 HMX1Q9NP08 348 aaPredicted RBP7.98□□□□□ -1.13
SLIRP-203ENST00000554074 SMCHD1A6NHR9 2005 aa7.98□□□□□ -1.13
SLIRP-203ENST00000554074 H0YGN5 161 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 GLRX3O76003 335 aaKnown RBP7.97□□□□□ -1.13
SLIRP-203ENST00000554074 MBD4O95243 580 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 TFRCP02786 760 aaKnown RBP7.97□□□□□ -1.13
SLIRP-203ENST00000554074 RGS2P41220 211 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 Q3C1V9 767 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 C20orf194Q5TEA3 1177 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 GPR142Q7Z601 462 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 PLEKHH3Q7Z736 793 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 CCAR1Q8IX12 1150 aaKnown RBP7.97□□□□□ -1.13
SLIRP-203ENST00000554074 ACER1Q8TDN7 264 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 SDR42E1Q8WUS8 393 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 TRIB2Q92519 343 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 LPAR1Q92633 364 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 DPF3Q92784 378 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 EDC3Q96F86 508 aaKnown RBP7.97□□□□□ -1.13
SLIRP-203ENST00000554074 CCDC17Q96LX7 622 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 APBA2Q99767 749 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 PORCNQ9H237 461 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 DCTPP1Q9H773 170 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 COLQQ9Y215 455 aaPredicted RBP7.97□□□□□ -1.13
SLIRP-203ENST00000554074 NR2E3Q9Y5X4 410 aa7.97□□□□□ -1.13
SLIRP-203ENST00000554074 SPDYE16A6NNV3 312 aaPredicted RBP7.96□□□□□ -1.14
SLIRP-203ENST00000554074 CNMDO75829 334 aa7.96□□□□□ -1.14
SLIRP-203ENST00000554074 HOXC6P09630 235 aa7.96□□□□□ -1.14
SLIRP-203ENST00000554074 ZKSCAN1P17029 563 aaPredicted RBP7.96□□□□□ -1.14
SLIRP-203ENST00000554074 CYP2B6P20813 491 aa7.96□□□□□ -1.14
SLIRP-203ENST00000554074 FXR1P51114 621 aaKnown RBP eCLIP7.96□□□□□ -1.14
SLIRP-203ENST00000554074 SEPT2Q15019 361 aa7.96□□□□□ -1.14
SLIRP-203ENST00000554074 ZYXQ15942 572 aaKnown RBP7.96□□□□□ -1.14
SLIRP-203ENST00000554074 C12orf60Q5U649 245 aa7.96□□□□□ -1.14
SLIRP-203ENST00000554074 NECAB2Q7Z6G3 386 aa7.96□□□□□ -1.14
SLIRP-203ENST00000554074 AMOTL1Q8IY63 956 aa7.96□□□□□ -1.14
SLIRP-203ENST00000554074 DDRGK1Q96HY6 314 aa7.96□□□□□ -1.14
SLIRP-203ENST00000554074 GPATCH3Q96I76 525 aa7.96□□□□□ -1.14
SLIRP-203ENST00000554074 PAGR1Q9BTK6 254 aa7.96□□□□□ -1.14
SLIRP-203ENST00000554074 RPAP3Q9H6T3 665 aaPredicted RBP7.96□□□□□ -1.14
SLIRP-203ENST00000554074 SH2D4AQ9H788 454 aa7.96□□□□□ -1.14
SLIRP-203ENST00000554074 ARMT1Q9H993 441 aa7.96□□□□□ -1.14
SLIRP-203ENST00000554074 ECHDC1Q9NTX5 307 aa7.96□□□□□ -1.14
SLIRP-203ENST00000554074 OGDHLQ9ULD0 1010 aa7.96□□□□□ -1.14
SLIRP-203ENST00000554074 A0A1W2PPC1 479 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms