RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CERKLQ49MI3 558 aaPredicted RBP14.06□□□□□ -0.16
PRPF40B-212ENST00000551111 MAP3K21Q5TCX8 1036 aa14.06□□□□□ -0.16
PRPF40B-212ENST00000551111 USP17L2Q6R6M4 530 aa14.06□□□□□ -0.16
PRPF40B-212ENST00000551111 HMX1Q9NP08 348 aaPredicted RBP14.06□□□□□ -0.16
PRPF40B-212ENST00000551111 GINM1Q9NU53 330 aa14.06□□□□□ -0.16
PRPF40B-212ENST00000551111 STAP2Q9UGK3 403 aa14.06□□□□□ -0.16
PRPF40B-212ENST00000551111 COL6A3P12111 3177 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 A0A1W2PRG0 241 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 GOLIM4O00461 696 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 SOX1O00570 391 aaPredicted RBP14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 PRKAR2AP13861 404 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 CCND3P30281 292 aaPredicted RBP14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 GABPAQ06546 454 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 CACNB2Q08289 660 aaPredicted RBP14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 SEPT2Q15019 361 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 ABCB5Q2M3G0 1257 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 KIAA1755Q5JYT7 1200 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 MORN1Q5T089 497 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 SLC9C2Q5TAH2 1124 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 GPR142Q7Z601 462 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 LCORLQ8N3X6 602 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 SLC44A5Q8NCS7 719 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 SDR42E1Q8WUS8 393 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 C12orf42Q96LP6 360 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 DNAJC2Q99543 621 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 NUDT12Q9BQG2 462 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 EHD4Q9H223 541 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 ZBTB40Q9NUA8 1239 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 FLRT1Q9NZU1 646 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 BTBD7Q9P203 1132 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 NR2E3Q9Y5X4 410 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 ZNF532Q9HCE3 1301 aa14.05□□□□□ -0.16
PRPF40B-212ENST00000551111 MAGEB6P1A0A0J9YX57 407 aa14.04□□□□□ -0.16
PRPF40B-212ENST00000551111 PRKAB2O43741 272 aa14.04□□□□□ -0.16
PRPF40B-212ENST00000551111 IGSF3O75054 1194 aa14.04□□□□□ -0.16
PRPF40B-212ENST00000551111 CATSPERGQ6ZRH7 1159 aa14.04□□□□□ -0.16
PRPF40B-212ENST00000551111 NECAB2Q7Z6G3 386 aa14.04□□□□□ -0.16
PRPF40B-212ENST00000551111 ERC1Q8IUD2 1116 aa14.04□□□□□ -0.16
PRPF40B-212ENST00000551111 CLEC10AQ8IUN9 316 aa14.04□□□□□ -0.16
PRPF40B-212ENST00000551111 C7orf61Q8IZ16 206 aa14.04□□□□□ -0.16
PRPF40B-212ENST00000551111 FEZ1Q99689 392 aa14.04□□□□□ -0.16
PRPF40B-212ENST00000551111 OGDHLQ9ULD0 1010 aa14.04□□□□□ -0.16
PRPF40B-212ENST00000551111 ZMYND8Q9ULU4 1186 aaPredicted RBP14.04□□□□□ -0.16
PRPF40B-212ENST00000551111 PFASO15067 1338 aa14.04□□□□□ -0.16
PRPF40B-212ENST00000551111 USP17L15C9J2P7 530 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 USP17L13C9JLJ4 530 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 USP17L11C9JVI0 530 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 USP17L18D6R9N7 530 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 USP17L22D6RA61 530 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 USP17L17D6RBQ6 530 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 USP17L19D6RCP7 530 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 USP17L20D6RJB6 530 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 POLR3DP05423 398 aaPredicted RBP14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 XRCC5P13010 732 aaKnown RBP14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 VCAM1P19320 739 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 MAPK4P31152 587 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 USP17L24Q0WX57 530 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 C20orf194Q5TEA3 1177 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 LHX8Q68G74 356 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 PLEKHH3Q7Z736 793 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 TTC6Q86TZ1 520 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 DYNLL2Q96FJ2 89 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 KIAA1683Q9H0B3 1180 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 ARMT1Q9H993 441 aa14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 DCP1AQ9NPI6 582 aaPredicted RBP14.03□□□□□ -0.16
PRPF40B-212ENST00000551111 A0A0G2JMZ2 1700 aa14.02□□□□□ -0.16
PRPF40B-212ENST00000551111 CYP2D7A0A087X1C5 515 aa14.02□□□□□ -0.17
PRPF40B-212ENST00000551111 SYN1P17600 705 aa14.02□□□□□ -0.17
PRPF40B-212ENST00000551111 SIAH1Q8IUQ4 282 aa14.02□□□□□ -0.17
PRPF40B-212ENST00000551111 NPLOC4Q8TAT6 608 aa14.02□□□□□ -0.17
PRPF40B-212ENST00000551111 LRCH3Q96II8 777 aa14.02□□□□□ -0.17
PRPF40B-212ENST00000551111 BOLA2Q9H3K6 86 aa14.02□□□□□ -0.17
PRPF40B-212ENST00000551111 RPAP3Q9H6T3 665 aaPredicted RBP14.02□□□□□ -0.17
PRPF40B-212ENST00000551111 MCM9Q9NXL9 1143 aa14.02□□□□□ -0.17
PRPF40B-212ENST00000551111 RABGAP1Q9Y3P9 1069 aa14.02□□□□□ -0.17
PRPF40B-212ENST00000551111 PLXNA1Q9UIW2 1896 aa14.01□□□□□ -0.17
PRPF40B-212ENST00000551111 SPDYE16A6NNV3 312 aaPredicted RBP14.01□□□□□ -0.17
PRPF40B-212ENST00000551111 SMARCA5O60264 1052 aaPredicted RBP14.01□□□□□ -0.17
PRPF40B-212ENST00000551111 ZKSCAN1P17029 563 aaPredicted RBP14.01□□□□□ -0.17
PRPF40B-212ENST00000551111 HSP90AB4PQ58FF6 505 aa14.01□□□□□ -0.17
PRPF40B-212ENST00000551111 CLASRPQ8N2M8 674 aaKnown RBP14.01□□□□□ -0.17
PRPF40B-212ENST00000551111 ANKLE1Q8NAG6 615 aa14.01□□□□□ -0.17
PRPF40B-212ENST00000551111 SOCS4Q8WXH5 440 aa14.01□□□□□ -0.17
PRPF40B-212ENST00000551111 KIF1BPQ96EK5 621 aa14.01□□□□□ -0.17
PRPF40B-212ENST00000551111 NBPF3Q9H094 633 aa14.01□□□□□ -0.17
PRPF40B-212ENST00000551111 LAMA2P24043 3122 aaKnown RBP14.01□□□□□ -0.17
PRPF40B-212ENST00000551111 MPHOSPH10O00566 681 aaKnown RBP14□□□□□ -0.17
PRPF40B-212ENST00000551111 IFIT2P09913 472 aaKnown RBP14□□□□□ -0.17
PRPF40B-212ENST00000551111 RGS2P41220 211 aa14□□□□□ -0.17
PRPF40B-212ENST00000551111 MAP2K5Q13163 448 aa14□□□□□ -0.17
PRPF40B-212ENST00000551111 PDE3AQ14432 1141 aa14□□□□□ -0.17
PRPF40B-212ENST00000551111 TTF1Q15361 905 aaPredicted RBP14□□□□□ -0.17
PRPF40B-212ENST00000551111 WDR78Q5VTH9 848 aa14□□□□□ -0.17
PRPF40B-212ENST00000551111 CERS3Q8IU89 383 aa14□□□□□ -0.17
PRPF40B-212ENST00000551111 CCAR1Q8IX12 1150 aaKnown RBP14□□□□□ -0.17
PRPF40B-212ENST00000551111 RPAP2Q8IXW5 612 aaPredicted RBP14□□□□□ -0.17
PRPF40B-212ENST00000551111 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14□□□□□ -0.17
PRPF40B-212ENST00000551111 GDF15Q99988 308 aa14□□□□□ -0.17
PRPF40B-212ENST00000551111 CRNKL1Q9BZJ0 848 aaKnown RBP14□□□□□ -0.17
PRPF40B-212ENST00000551111 C11orf49Q9H6J7 331 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms