RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 ASIC2Q16515 512 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 ICE2Q659A1 982 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 PLEKHA4Q9H4M7 779 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 LGR6Q9HBX8 967 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 RTEL1Q9NZ71 1219 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 CCDC65Q8IXS2 484 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 IQCDQ96DY2 449 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 PLCB1Q9NQ66 1216 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 CIB2O75838 187 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 APBA1Q02410 837 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 LETM2Q2VYF4 491 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 FBXO18Q8NFZ0 1043 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 MAP4K1Q92918 833 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 TMOD2Q9NZR1 351 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 PCDHA5Q9Y5H7 936 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 SPATA1Q5VX52 437 aa17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 C2CD5Q86YS7 1000 aa17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 ARHGEF2Q92974 986 aaKnown RBP17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 ADAM21Q9UKJ8 722 aa17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 FYB2Q5VWT5 728 aa17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 MYO1AQ9UBC5 1043 aa17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 KCNJ18B7U540 433 aa17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 KCNJ12Q14500 433 aa17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 GPIHBP1Q8IV16 184 aa17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 CCDC170Q8IYT3 715 aa17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 RNF10Q8N5U6 811 aaKnown RBP17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 CCDC63Q8NA47 563 aa17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 RRP36Q96EU6 259 aaKnown RBP17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 TSNARE1Q96NA8 513 aa17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 BLZF1Q9H2G9 400 aa17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 RCOR1Q9UKL0 485 aa17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 SAMM50Q9Y512 469 aa17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 MORC2Q9Y6X9 1032 aaPredicted RBP17.57■□□□□ 0.4
RBFOX1-212ENST00000550418 A0A087WWV3 80 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 ZNF526Q8TF50 670 aaPredicted RBP17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 MCUR1Q96AQ8 359 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 FAM207AQ9NSI2 230 aaPredicted RBP17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 HIP1RO75146 1068 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 FERP16591 822 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 MAGEA9P43362 315 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 AP1ARQ63HQ0 302 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 SPOPO43791 374 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 KLHL30Q0D2K2 578 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 KMT5BQ4FZB7 885 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 TTC19Q6DKK2 380 aaPredicted RBP17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 ZCRB1Q8TBF4 217 aaKnown RBP17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 EAF2Q96CJ1 260 aaPredicted RBP17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 PEX19P40855 299 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 GOLGA8FQ08AF8 430 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 GOLGA8DPQ0D2H9 430 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 NAA30Q147X3 362 aaPredicted RBP17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 DDB1Q16531 1140 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 RRAGAQ7L523 313 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 SIRT2Q8IXJ6 389 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 HELBQ8NG08 1087 aaPredicted RBP17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 METTL22Q9BUU2 404 aaPredicted RBP17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 CLIC4Q9Y696 253 aa17.56■□□□□ 0.4
RBFOX1-212ENST00000550418 PLEKHG3A1L390 1219 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 STK38LQ9Y2H1 464 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 ATP2A2P16615 1042 aaKnown RBP17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 IFT88Q13099 833 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 PEX26Q7Z412 305 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 TBC1D31Q96DN5 1066 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 TSPOAP1O95153 1857 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 RGS16O15492 202 aaPredicted RBP17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 CLTAP09496 248 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 DNM2P50570 870 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 ZNF131P52739 623 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 SCRN1Q12765 414 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 DENND2CQ68D51 928 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 KCTD16Q68DU8 428 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 NOSTRINQ8IVI9 506 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 MIPOL1Q8TD10 442 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 PLEKHF1Q96S99 279 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 NUCKS1Q9H1E3 243 aaKnown RBP17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 CETN3O15182 167 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 TNFAIP3P21580 790 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 SEPT6Q14141 434 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 PPP2R5BQ15173 497 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 NBPF6Q5VWK0 638 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 NBPF4Q96M43 638 aa17.55■□□□□ 0.4
RBFOX1-212ENST00000550418 RNMTO43148 476 aaKnown RBP17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 MORC3Q14149 939 aa17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 ARID5BQ14865 1188 aa17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 ODF2LQ9ULJ1 636 aa17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 FAM13AO94988 1023 aa17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 CASP14P31944 242 aa17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 CASP8Q14790 479 aa17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 CCDC110Q8TBZ0 833 aa17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 GSTO1P78417 241 aa17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 RAD51AP2Q09MP3 1159 aa17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 SFMBT2Q5VUG0 894 aa17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 SARM1Q6SZW1 724 aa17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 UBL4BQ8N7F7 174 aa17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 HINFPQ9BQA5 517 aa17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 FERMT1Q9BQL6 677 aa17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 HDAC9Q9UKV0 1011 aa17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.54■□□□□ 0.4
RBFOX1-212ENST00000550418 FLOT1O75955 427 aa17.53■□□□□ 0.4
RBFOX1-212ENST00000550418 CLIC6Q96NY7 704 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms