RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 CCZ1BP86790 482 aa21.26■□□□□ 0.99
PRPF40B-208ENST00000548436 CCZ1P86791 482 aaPredicted RBP21.26■□□□□ 0.99
PRPF40B-208ENST00000548436 HSP90AA2PQ14568 343 aaPredicted RBP21.26■□□□□ 0.99
PRPF40B-208ENST00000548436 NPY5RQ15761 445 aa21.26■□□□□ 0.99
PRPF40B-208ENST00000548436 GRIK5Q16478 980 aa21.26■□□□□ 0.99
PRPF40B-208ENST00000548436 GPR101Q96P66 508 aaPredicted RBP21.26■□□□□ 0.99
PRPF40B-208ENST00000548436 MKRN1Q9UHC7 482 aaKnown RBP21.26■□□□□ 0.99
PRPF40B-208ENST00000548436 CEP131Q9UPN4 1083 aa21.26■□□□□ 0.99
PRPF40B-208ENST00000548436 UBR3Q6ZT12 1888 aa21.26■□□□□ 0.99
PRPF40B-208ENST00000548436 LDHBP07195 334 aaKnown RBP21.25■□□□□ 0.99
PRPF40B-208ENST00000548436 BMP6P22004 513 aa21.25■□□□□ 0.99
PRPF40B-208ENST00000548436 PDE4BQ07343 736 aa21.25■□□□□ 0.99
PRPF40B-208ENST00000548436 USP49Q70CQ1 688 aa21.25■□□□□ 0.99
PRPF40B-208ENST00000548436 CSRNP2Q9H175 543 aa21.25■□□□□ 0.99
PRPF40B-208ENST00000548436 SERTAD1Q9UHV2 236 aa21.25■□□□□ 0.99
PRPF40B-208ENST00000548436 AFF2P51816 1311 aa21.25■□□□□ 0.99
PRPF40B-208ENST00000548436 ATP1A3P13637 1013 aa21.25■□□□□ 0.99
PRPF40B-208ENST00000548436 GTF2F1P35269 517 aaKnown RBP eCLIP21.25■□□□□ 0.99
PRPF40B-208ENST00000548436 RCSD1Q6JBY9 416 aa21.25■□□□□ 0.99
PRPF40B-208ENST00000548436 WDR66Q8TBY9 1149 aa21.25■□□□□ 0.99
PRPF40B-208ENST00000548436 C16orf45Q96MC5 204 aaPredicted RBP21.25■□□□□ 0.99
PRPF40B-208ENST00000548436 OSBPL5Q9H0X9 879 aaPredicted RBP21.25■□□□□ 0.99
PRPF40B-208ENST00000548436 XDHP47989 1333 aa21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 CDK5RAP2Q96SN8 1893 aa21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 TSPY2A6NKD2 308 aa21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 WNT7AO00755 349 aa21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 SKILP12757 684 aa21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 NOM1Q5C9Z4 860 aaKnown RBP21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 PRR5LQ6MZQ0 368 aa21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 CTCFLQ8NI51 663 aaPredicted RBP21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 SH3RF3Q8TEJ3 882 aaPredicted RBP21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 TNFRSF25Q93038 417 aa21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 IMPACTQ9P2X3 320 aa21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 TRIM75PA6NK02 468 aa21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 PRR29P0C7W0 189 aa21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 FANCCQ00597 558 aa21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 POSTNQ15063 836 aa21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 C12orf60Q5U649 245 aa21.24■□□□□ 0.99
PRPF40B-208ENST00000548436 NAV1Q8NEY1 1877 aa21.23■□□□□ 0.99
PRPF40B-208ENST00000548436 MYL5Q02045 173 aa21.23■□□□□ 0.99
PRPF40B-208ENST00000548436 DIXDC1Q155Q3 683 aa21.23■□□□□ 0.99
PRPF40B-208ENST00000548436 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.22■□□□□ 0.99
PRPF40B-208ENST00000548436 VEGFAP15692 232 aaPredicted RBP21.22■□□□□ 0.99
PRPF40B-208ENST00000548436 USP5P45974 858 aa21.22■□□□□ 0.99
PRPF40B-208ENST00000548436 GSDMDP57764 484 aa21.22■□□□□ 0.99
PRPF40B-208ENST00000548436 TMC6Q7Z403 805 aa21.22■□□□□ 0.99
PRPF40B-208ENST00000548436 PDILTQ8N807 584 aa21.22■□□□□ 0.99
PRPF40B-208ENST00000548436 TSC1Q92574 1164 aa21.22■□□□□ 0.99
PRPF40B-208ENST00000548436 MAN1B1Q9UKM7 699 aa21.22■□□□□ 0.99
PRPF40B-208ENST00000548436 MORC2Q9Y6X9 1032 aaPredicted RBP21.22■□□□□ 0.99
PRPF40B-208ENST00000548436 ACTN4O43707 911 aaKnown RBP21.22■□□□□ 0.99
PRPF40B-208ENST00000548436 OLFM4Q6UX06 510 aa21.22■□□□□ 0.99
PRPF40B-208ENST00000548436 GRAMD1CQ8IYS0 662 aa21.22■□□□□ 0.99
PRPF40B-208ENST00000548436 DYNLL2Q96FJ2 89 aa21.22■□□□□ 0.99
PRPF40B-208ENST00000548436 IL17RBQ9NRM6 502 aa21.22■□□□□ 0.99
PRPF40B-208ENST00000548436 HOOK1Q9UJC3 728 aaKnown RBP21.22■□□□□ 0.99
PRPF40B-208ENST00000548436 USP27XA6NNY8 438 aa21.21■□□□□ 0.99
PRPF40B-208ENST00000548436 RIOK3O14730 519 aaKnown RBP21.21■□□□□ 0.99
PRPF40B-208ENST00000548436 SARSP49591 514 aaKnown RBP21.21■□□□□ 0.99
PRPF40B-208ENST00000548436 GPSM2P81274 684 aa21.21■□□□□ 0.99
PRPF40B-208ENST00000548436 TFAP4Q01664 338 aa21.21■□□□□ 0.99
PRPF40B-208ENST00000548436 TPD52L1Q16890 204 aaPredicted RBP21.21■□□□□ 0.99
PRPF40B-208ENST00000548436 NT5DC1Q5TFE4 455 aa21.21■□□□□ 0.99
PRPF40B-208ENST00000548436 ZNF804AQ7Z570 1209 aa21.21■□□□□ 0.99
PRPF40B-208ENST00000548436 BRMS1Q9HCU9 246 aa21.2■□□□□ 0.99
PRPF40B-208ENST00000548436 EP400Q96L91 3159 aa21.2■□□□□ 0.98
PRPF40B-208ENST00000548436 A0A087X0B3 334 aa21.2■□□□□ 0.98
PRPF40B-208ENST00000548436 ONECUT3O60422 494 aaPredicted RBP21.2■□□□□ 0.98
PRPF40B-208ENST00000548436 SCG2P13521 617 aa21.2■□□□□ 0.98
PRPF40B-208ENST00000548436 TNNT1P13805 278 aa21.2■□□□□ 0.98
PRPF40B-208ENST00000548436 ARMCX5Q6P1M9 558 aa21.2■□□□□ 0.98
PRPF40B-208ENST00000548436 C15orf52Q6ZUT6 534 aaKnown RBP21.2■□□□□ 0.98
PRPF40B-208ENST00000548436 DPF2Q92785 391 aa21.2■□□□□ 0.98
PRPF40B-208ENST00000548436 RPGRQ92834 1020 aaKnown RBP21.2■□□□□ 0.98
PRPF40B-208ENST00000548436 EPSTI1Q96J88 318 aa21.2■□□□□ 0.98
PRPF40B-208ENST00000548436 ADAMTS3O15072 1205 aa21.19■□□□□ 0.98
PRPF40B-208ENST00000548436 GYS1P13807 737 aa21.19■□□□□ 0.98
PRPF40B-208ENST00000548436 ADRA2BP18089 450 aa21.19■□□□□ 0.98
PRPF40B-208ENST00000548436 PPP4CP60510 307 aa21.19■□□□□ 0.98
PRPF40B-208ENST00000548436 ZNF174Q15697 407 aa21.19■□□□□ 0.98
PRPF40B-208ENST00000548436 SEPT12Q8IYM1 358 aa21.19■□□□□ 0.98
PRPF40B-208ENST00000548436 BCL11BQ9C0K0 894 aaPredicted RBP21.19■□□□□ 0.98
PRPF40B-208ENST00000548436 FANCLQ9NW38 375 aa21.19■□□□□ 0.98
PRPF40B-208ENST00000548436 GSTO1P78417 241 aa21.19■□□□□ 0.98
PRPF40B-208ENST00000548436 PFKFB3Q16875 520 aaPredicted RBP21.19■□□□□ 0.98
PRPF40B-208ENST00000548436 CRY2Q49AN0 593 aa21.19■□□□□ 0.98
PRPF40B-208ENST00000548436 TGFBRAP1Q8WUH2 860 aa21.19■□□□□ 0.98
PRPF40B-208ENST00000548436 ROBO3Q96MS0 1386 aa21.18■□□□□ 0.98
PRPF40B-208ENST00000548436 IGSF3O75054 1194 aa21.18■□□□□ 0.98
PRPF40B-208ENST00000548436 MORC3Q14149 939 aa21.18■□□□□ 0.98
PRPF40B-208ENST00000548436 TTC38Q5R3I4 469 aa21.18■□□□□ 0.98
PRPF40B-208ENST00000548436 SMARCE1Q969G3 411 aa21.18■□□□□ 0.98
PRPF40B-208ENST00000548436 KAT14Q9H8E8 782 aa21.18■□□□□ 0.98
PRPF40B-208ENST00000548436 BAG3O95817 575 aa21.17■□□□□ 0.98
PRPF40B-208ENST00000548436 UBASH3AP57075 661 aa21.17■□□□□ 0.98
PRPF40B-208ENST00000548436 NLRP5P59047 1200 aa21.17■□□□□ 0.98
PRPF40B-208ENST00000548436 ZNF827Q17R98 1081 aa21.17■□□□□ 0.98
PRPF40B-208ENST00000548436 DGKHQ86XP1 1220 aa21.17■□□□□ 0.98
PRPF40B-208ENST00000548436 CD209Q9NNX6 404 aa21.17■□□□□ 0.98
PRPF40B-208ENST00000548436 USP17L3A6NCW0 530 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms