RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 SLFNL1Q499Z3 407 aa24.35■■□□□ 1.49
DDB1-220ENST00000542337 CWC22Q9HCG8 908 aaKnown RBP24.35■■□□□ 1.49
DDB1-220ENST00000542337 ZBTB47Q9UFB7 747 aaPredicted RBP24.35■■□□□ 1.49
DDB1-220ENST00000542337 SLC4A4Q9Y6R1 1079 aa24.35■■□□□ 1.49
DDB1-220ENST00000542337 CYP2D6P10635 497 aa24.34■■□□□ 1.49
DDB1-220ENST00000542337 MAPK4P31152 587 aa24.34■■□□□ 1.49
DDB1-220ENST00000542337 SEPT2Q15019 361 aa24.34■■□□□ 1.49
DDB1-220ENST00000542337 LRRFIP1Q32MZ4 808 aaKnown RBP24.34■■□□□ 1.49
DDB1-220ENST00000542337 ACER1Q8TDN7 264 aa24.34■■□□□ 1.49
DDB1-220ENST00000542337 GCC1Q96CN9 775 aa24.34■■□□□ 1.49
DDB1-220ENST00000542337 UNC93B1Q9H1C4 597 aa24.34■■□□□ 1.49
DDB1-220ENST00000542337 TMEM179Q6ZVK1 233 aa24.33■■□□□ 1.49
DDB1-220ENST00000542337 PAGR1Q9BTK6 254 aa24.33■■□□□ 1.49
DDB1-220ENST00000542337 RBPJLQ9UBG7 517 aa24.33■■□□□ 1.49
DDB1-220ENST00000542337 MGAMO43451 1857 aa24.32■■□□□ 1.48
DDB1-220ENST00000542337 ERVK-9P63128 1117 aa24.32■■□□□ 1.48
DDB1-220ENST00000542337 ERVK-24P63145 666 aa24.32■■□□□ 1.48
DDB1-220ENST00000542337 CCNA1P78396 465 aa24.32■■□□□ 1.48
DDB1-220ENST00000542337 CATSPERGQ6ZRH7 1159 aa24.32■■□□□ 1.48
DDB1-220ENST00000542337 KBTBD3Q8NAB2 608 aa24.32■■□□□ 1.48
DDB1-220ENST00000542337 SOCS4Q8WXH5 440 aa24.32■■□□□ 1.48
DDB1-220ENST00000542337 CCDC17Q96LX7 622 aa24.32■■□□□ 1.48
DDB1-220ENST00000542337 NUDT12Q9BQG2 462 aa24.32■■□□□ 1.48
DDB1-220ENST00000542337 TXNRD2Q9NNW7 524 aa24.32■■□□□ 1.48
DDB1-220ENST00000542337 GJD2Q9UKL4 321 aa24.32■■□□□ 1.48
DDB1-220ENST00000542337 RABGAP1Q9Y3P9 1069 aa24.32■■□□□ 1.48
DDB1-220ENST00000542337 PCDHB15Q9Y5E8 787 aa24.32■■□□□ 1.48
DDB1-220ENST00000542337 USP17L12C9JPN9 530 aa24.31■■□□□ 1.48
DDB1-220ENST00000542337 USP17L21D6R901 530 aa24.31■■□□□ 1.48
DDB1-220ENST00000542337 ERC2O15083 957 aa24.31■■□□□ 1.48
DDB1-220ENST00000542337 VCAM1P19320 739 aa24.31■■□□□ 1.48
DDB1-220ENST00000542337 GUCY1A2P33402 732 aa24.31■■□□□ 1.48
DDB1-220ENST00000542337 C12orf60Q5U649 245 aa24.31■■□□□ 1.48
DDB1-220ENST00000542337 U2AF1L4Q8WU68 220 aaKnown RBP24.31■■□□□ 1.48
DDB1-220ENST00000542337 DYNLL2Q96FJ2 89 aa24.31■■□□□ 1.48
DDB1-220ENST00000542337 PUS7LQ9H0K6 701 aaKnown RBP24.31■■□□□ 1.48
DDB1-220ENST00000542337 GLRX3O76003 335 aaKnown RBP24.3■■□□□ 1.48
DDB1-220ENST00000542337 SGPL1O95470 568 aa24.3■■□□□ 1.48
DDB1-220ENST00000542337 TFRCP02786 760 aaKnown RBP24.3■■□□□ 1.48
DDB1-220ENST00000542337 HMGCRP04035 888 aa24.3■■□□□ 1.48
DDB1-220ENST00000542337 ZFYP08048 801 aaPredicted RBP24.3■■□□□ 1.48
DDB1-220ENST00000542337 SLC44A5Q8NCS7 719 aa24.3■■□□□ 1.48
DDB1-220ENST00000542337 RPAP3Q9H6T3 665 aaPredicted RBP24.3■■□□□ 1.48
DDB1-220ENST00000542337 SH2D4AQ9H788 454 aa24.3■■□□□ 1.48
DDB1-220ENST00000542337 ARHGEF10LQ9HCE6 1279 aa24.3■■□□□ 1.48
DDB1-220ENST00000542337 CHGBP05060 677 aa24.29■■□□□ 1.48
DDB1-220ENST00000542337 EVX2Q03828 476 aa24.29■■□□□ 1.48
DDB1-220ENST00000542337 Q3C1V9 767 aa24.29■■□□□ 1.48
DDB1-220ENST00000542337 TRMT44Q8IYL2 757 aaKnown RBP24.29■■□□□ 1.48
DDB1-220ENST00000542337 SHISA4Q96DD7 197 aa24.29■■□□□ 1.48
DDB1-220ENST00000542337 YTHDC1Q96MU7 727 aaKnown RBP24.29■■□□□ 1.48
DDB1-220ENST00000542337 DEFB118Q96PH6 123 aa24.29■■□□□ 1.48
DDB1-220ENST00000542337 TTC41PQ6P2S7 1318 aa24.29■■□□□ 1.48
DDB1-220ENST00000542337 NAV1Q8NEY1 1877 aa24.28■■□□□ 1.48
DDB1-220ENST00000542337 RNF113AO15541 343 aaKnown RBP24.28■■□□□ 1.48
DDB1-220ENST00000542337 CYP2B6P20813 491 aa24.28■■□□□ 1.48
DDB1-220ENST00000542337 CDK8P49336 464 aa24.28■■□□□ 1.48
DDB1-220ENST00000542337 TSHZ3Q63HK5 1081 aa24.28■■□□□ 1.48
DDB1-220ENST00000542337 PLEKHH3Q7Z736 793 aa24.28■■□□□ 1.48
DDB1-220ENST00000542337 APPBP2Q92624 585 aa24.28■■□□□ 1.48
DDB1-220ENST00000542337 STRBPQ96SI9 672 aaKnown RBP24.28■■□□□ 1.48
DDB1-220ENST00000542337 HOXC10Q9NYD6 342 aa24.28■■□□□ 1.48
DDB1-220ENST00000542337 ARPP21Q9UBL0 812 aaPredicted RBP24.28■■□□□ 1.48
DDB1-220ENST00000542337 BRCA2P51587 3418 aa24.27■■□□□ 1.48
DDB1-220ENST00000542337 PEX10O60683 326 aa24.27■■□□□ 1.48
DDB1-220ENST00000542337 XRCC5P13010 732 aaKnown RBP24.27■■□□□ 1.48
DDB1-220ENST00000542337 CTR9Q6PD62 1173 aa24.27■■□□□ 1.48
DDB1-220ENST00000542337 C16orf86Q6ZW13 317 aa24.27■■□□□ 1.48
DDB1-220ENST00000542337 DPF3Q92784 378 aa24.27■■□□□ 1.48
DDB1-220ENST00000542337 HTATIP2Q9BUP3 242 aa24.27■■□□□ 1.48
DDB1-220ENST00000542337 MKI67P46013 3256 aaKnown RBP24.27■■□□□ 1.48
DDB1-220ENST00000542337 CYP2D7A0A087X1C5 515 aa24.26■■□□□ 1.47
DDB1-220ENST00000542337 FARP2O94887 1054 aaPredicted RBP24.26■■□□□ 1.47
DDB1-220ENST00000542337 AKR1B1P15121 316 aa24.26■■□□□ 1.47
DDB1-220ENST00000542337 RGS2P41220 211 aa24.26■■□□□ 1.47
DDB1-220ENST00000542337 ICA1Q05084 483 aa24.26■■□□□ 1.47
DDB1-220ENST00000542337 COG2Q14746 738 aa24.26■■□□□ 1.47
DDB1-220ENST00000542337 WDR78Q5VTH9 848 aa24.26■■□□□ 1.47
DDB1-220ENST00000542337 GIMAP6Q6P9H5 292 aa24.26■■□□□ 1.47
DDB1-220ENST00000542337 LBX2Q6XYB7 198 aa24.26■■□□□ 1.47
DDB1-220ENST00000542337 GPR142Q7Z601 462 aa24.26■■□□□ 1.47
DDB1-220ENST00000542337 LPAR1Q92633 364 aa24.26■■□□□ 1.47
DDB1-220ENST00000542337 TANGO6Q9C0B7 1094 aa24.26■■□□□ 1.47
DDB1-220ENST00000542337 HMX1Q9NP08 348 aaPredicted RBP24.26■■□□□ 1.47
DDB1-220ENST00000542337 PAK6Q9NQU5 681 aaPredicted RBP24.26■■□□□ 1.47
DDB1-220ENST00000542337 DDX60LQ5H9U9 1706 aaKnown RBP24.25■■□□□ 1.47
DDB1-220ENST00000542337 A0A1W2PRG0 241 aa24.25■■□□□ 1.47
DDB1-220ENST00000542337 GNAT2P19087 354 aa24.25■■□□□ 1.47
DDB1-220ENST00000542337 CRBNQ96SW2 442 aa24.25■■□□□ 1.47
DDB1-220ENST00000542337 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.25■■□□□ 1.47
DDB1-220ENST00000542337 PORCNQ9H237 461 aa24.25■■□□□ 1.47
DDB1-220ENST00000542337 OSBP2Q969R2 916 aa24.24■■□□□ 1.47
DDB1-220ENST00000542337 KANSL2Q9H9L4 492 aa24.24■■□□□ 1.47
DDB1-220ENST00000542337 IVNS1ABPQ9Y6Y0 642 aa24.24■■□□□ 1.47
DDB1-220ENST00000542337 RPTORQ8N122 1335 aa24.24■■□□□ 1.47
DDB1-220ENST00000542337 SPDYE16A6NNV3 312 aaPredicted RBP24.23■■□□□ 1.47
DDB1-220ENST00000542337 SLC34A2O95436 690 aa24.23■■□□□ 1.47
DDB1-220ENST00000542337 APPP05067 770 aa24.23■■□□□ 1.47
DDB1-220ENST00000542337 ZKSCAN1P17029 563 aaPredicted RBP24.23■■□□□ 1.47
DDB1-220ENST00000542337 ATP2B2Q01814 1243 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms