RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 KANK3Q6NY19 840 aa20.55■□□□□ 0.88
GNE-204ENST00000539208 ANKS1AQ92625 1134 aa20.55■□□□□ 0.88
GNE-204ENST00000539208 TNFRSF25Q93038 417 aa20.55■□□□□ 0.88
GNE-204ENST00000539208 MCM9Q9NXL9 1143 aa20.55■□□□□ 0.88
GNE-204ENST00000539208 ROBO3Q96MS0 1386 aa20.54■□□□□ 0.88
GNE-204ENST00000539208 MYL5Q02045 173 aa20.54■□□□□ 0.88
GNE-204ENST00000539208 FAM47AQ5JRC9 791 aa20.54■□□□□ 0.88
GNE-204ENST00000539208 OLFM4Q6UX06 510 aa20.54■□□□□ 0.88
GNE-204ENST00000539208 SRBD1Q8N5C6 995 aaKnown RBP20.54■□□□□ 0.88
GNE-204ENST00000539208 XPO4Q9C0E2 1151 aaKnown RBP20.54■□□□□ 0.88
GNE-204ENST00000539208 HSD3B7Q9H2F3 369 aa20.54■□□□□ 0.88
GNE-204ENST00000539208 TSPY2A6NKD2 308 aa20.53■□□□□ 0.88
GNE-204ENST00000539208 NPY5RQ15761 445 aa20.53■□□□□ 0.88
GNE-204ENST00000539208 CRY2Q49AN0 593 aa20.53■□□□□ 0.88
GNE-204ENST00000539208 RCSD1Q6JBY9 416 aa20.53■□□□□ 0.88
GNE-204ENST00000539208 PRR5LQ6MZQ0 368 aa20.53■□□□□ 0.88
GNE-204ENST00000539208 DGKHQ86XP1 1220 aa20.53■□□□□ 0.88
GNE-204ENST00000539208 LRRC4BQ9NT99 713 aa20.53■□□□□ 0.88
GNE-204ENST00000539208 IFNKQ9P0W0 207 aa20.53■□□□□ 0.88
GNE-204ENST00000539208 NMT2O60551 498 aa20.53■□□□□ 0.88
GNE-204ENST00000539208 BAG3O95817 575 aa20.53■□□□□ 0.88
GNE-204ENST00000539208 CCDC178Q5BJE1 867 aa20.53■□□□□ 0.88
GNE-204ENST00000539208 SPECC1Q5M775 1068 aa20.53■□□□□ 0.88
GNE-204ENST00000539208 FILIP1Q7Z7B0 1213 aa20.53■□□□□ 0.88
GNE-204ENST00000539208 CERS3Q8IU89 383 aa20.53■□□□□ 0.88
GNE-204ENST00000539208 KCND1Q9NSA2 647 aa20.53■□□□□ 0.88
GNE-204ENST00000539208 POLR2DO15514 142 aaKnown RBP20.52■□□□□ 0.88
GNE-204ENST00000539208 LDHCP07864 332 aa20.52■□□□□ 0.88
GNE-204ENST00000539208 USP17L8P0C7I0 530 aa20.52■□□□□ 0.88
GNE-204ENST00000539208 KIF5BP33176 963 aa20.52■□□□□ 0.88
GNE-204ENST00000539208 SARSP49591 514 aaKnown RBP20.52■□□□□ 0.88
GNE-204ENST00000539208 POSTNQ15063 836 aa20.52■□□□□ 0.88
GNE-204ENST00000539208 ISM2Q6H9L7 571 aa20.52■□□□□ 0.88
GNE-204ENST00000539208 SKILP12757 684 aa20.52■□□□□ 0.88
GNE-204ENST00000539208 CCZ1BP86790 482 aa20.52■□□□□ 0.88
GNE-204ENST00000539208 CCZ1P86791 482 aaPredicted RBP20.52■□□□□ 0.88
GNE-204ENST00000539208 ARID5BQ14865 1188 aa20.52■□□□□ 0.88
GNE-204ENST00000539208 TRIML1Q8N9V2 468 aa20.52■□□□□ 0.88
GNE-204ENST00000539208 FERMT2Q96AC1 680 aa20.52■□□□□ 0.88
GNE-204ENST00000539208 CSRNP2Q9H175 543 aa20.52■□□□□ 0.88
GNE-204ENST00000539208 JAG2Q9Y219 1238 aa20.52■□□□□ 0.88
GNE-204ENST00000539208 SMC2O95347 1197 aa20.51■□□□□ 0.87
GNE-204ENST00000539208 SCG2P13521 617 aa20.51■□□□□ 0.87
GNE-204ENST00000539208 USP5P45974 858 aa20.51■□□□□ 0.87
GNE-204ENST00000539208 FANCCQ00597 558 aa20.51■□□□□ 0.87
GNE-204ENST00000539208 PFKFB3Q16875 520 aaPredicted RBP20.51■□□□□ 0.87
GNE-204ENST00000539208 EARS2Q5JPH6 523 aaKnown RBP20.51■□□□□ 0.87
GNE-204ENST00000539208 RPGRQ92834 1020 aaKnown RBP20.51■□□□□ 0.87
GNE-204ENST00000539208 SERTAD1Q9UHV2 236 aa20.51■□□□□ 0.87
GNE-204ENST00000539208 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.51■□□□□ 0.87
GNE-204ENST00000539208 hCG_1642624A0A1W2PR95 340 aa20.51■□□□□ 0.87
GNE-204ENST00000539208 ACTN4O43707 911 aaKnown RBP20.51■□□□□ 0.87
GNE-204ENST00000539208 HSP90AA2PQ14568 343 aaPredicted RBP20.51■□□□□ 0.87
GNE-204ENST00000539208 SH3RF3Q8TEJ3 882 aaPredicted RBP20.51■□□□□ 0.87
GNE-204ENST00000539208 TCP11L1Q9NUJ3 509 aa20.51■□□□□ 0.87
GNE-204ENST00000539208 UBR3Q6ZT12 1888 aa20.51■□□□□ 0.87
GNE-204ENST00000539208 FAM205CA6NFA0 338 aa20.5■□□□□ 0.87
GNE-204ENST00000539208 FOXN1O15353 648 aa20.5■□□□□ 0.87
GNE-204ENST00000539208 ATP2B1P20020 1258 aa20.5■□□□□ 0.87
GNE-204ENST00000539208 BMP6P22004 513 aa20.5■□□□□ 0.87
GNE-204ENST00000539208 ATP2B4P23634 1241 aa20.5■□□□□ 0.87
GNE-204ENST00000539208 LMOD1P29536 600 aaPredicted RBP20.5■□□□□ 0.87
GNE-204ENST00000539208 TRAPPC10P48553 1259 aa20.5■□□□□ 0.87
GNE-204ENST00000539208 CCDC150Q8NCX0 1101 aa20.5■□□□□ 0.87
GNE-204ENST00000539208 SPATA20Q8TB22 786 aa20.5■□□□□ 0.87
GNE-204ENST00000539208 CBFA2T2O43439 604 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 GYS1P13807 737 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 GPSM2P81274 684 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 TFAP4Q01664 338 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 MEX3CQ5U5Q3 659 aaKnown RBP20.49■□□□□ 0.87
GNE-204ENST00000539208 AMOTL1Q8IY63 956 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 SEPT12Q8IYM1 358 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 MLKLQ8NB16 471 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 CCDC34Q96HJ3 373 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 KAT14Q9H8E8 782 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 IL17RBQ9NRM6 502 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 MAN1B1Q9UKM7 699 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 IL1R1P14778 569 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 ST5P78524 1137 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 MORC3Q14149 939 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 RBM17Q96I25 401 aaKnown RBP20.49■□□□□ 0.87
GNE-204ENST00000539208 SH3GLB2Q9NR46 395 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 DACH1Q9UI36 760 aa20.49■□□□□ 0.87
GNE-204ENST00000539208 SMARCE1Q969G3 411 aa20.48■□□□□ 0.87
GNE-204ENST00000539208 MAP7D2Q96T17 732 aa20.48■□□□□ 0.87
GNE-204ENST00000539208 AFF2P51816 1311 aa20.48■□□□□ 0.87
GNE-204ENST00000539208 TPD52L1Q16890 204 aaPredicted RBP20.48■□□□□ 0.87
GNE-204ENST00000539208 SLC27A3Q5K4L6 730 aa20.48■□□□□ 0.87
GNE-204ENST00000539208 TTC38Q5R3I4 469 aa20.48■□□□□ 0.87
GNE-204ENST00000539208 TMC6Q7Z403 805 aa20.48■□□□□ 0.87
GNE-204ENST00000539208 CD209Q9NNX6 404 aa20.48■□□□□ 0.87
GNE-204ENST00000539208 TRPC5Q9UL62 973 aaPredicted RBP20.48■□□□□ 0.87
GNE-204ENST00000539208 BBOX1O75936 387 aa20.47■□□□□ 0.87
GNE-204ENST00000539208 SERPINB2P05120 415 aa20.47■□□□□ 0.87
GNE-204ENST00000539208 ATP1A3P13637 1013 aa20.47■□□□□ 0.87
GNE-204ENST00000539208 KCNJ6P48051 423 aa20.47■□□□□ 0.87
GNE-204ENST00000539208 GNAQP50148 359 aa20.47■□□□□ 0.87
GNE-204ENST00000539208 DIXDC1Q155Q3 683 aa20.47■□□□□ 0.87
GNE-204ENST00000539208 GRIK5Q16478 980 aa20.47■□□□□ 0.87
GNE-204ENST00000539208 CT47A1Q5JQC4 288 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms