RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 CYP26A1O43174 497 aa7.03□□□□□ -1.28
CD44-215ENST00000525241 UBOX5O94941 541 aa7.03□□□□□ -1.28
CD44-215ENST00000525241 FGRP09769 529 aa7.03□□□□□ -1.28
CD44-215ENST00000525241 FOSL1P15407 271 aa7.03□□□□□ -1.28
CD44-215ENST00000525241 RAG1P15918 1043 aa7.03□□□□□ -1.28
CD44-215ENST00000525241 GIPRP48546 466 aa7.03□□□□□ -1.28
CD44-215ENST00000525241 EIF6P56537 245 aaKnown RBP7.03□□□□□ -1.28
CD44-215ENST00000525241 ARID5AQ03989 594 aa7.03□□□□□ -1.28
CD44-215ENST00000525241 LSRQ86X29 649 aaPredicted RBP7.03□□□□□ -1.28
CD44-215ENST00000525241 PHACTR4Q8IZ21 702 aa7.03□□□□□ -1.28
CD44-215ENST00000525241 LRRC4CQ9HCJ2 640 aa7.03□□□□□ -1.28
CD44-215ENST00000525241 GTF2IRD1Q9UHL9 959 aa7.03□□□□□ -1.28
CD44-215ENST00000525241 MED26O95402 600 aa7.02□□□□□ -1.29
CD44-215ENST00000525241 ACRP10323 421 aa7.02□□□□□ -1.29
CD44-215ENST00000525241 POLR2BP30876 1174 aaKnown RBP7.02□□□□□ -1.29
CD44-215ENST00000525241 DNAJA1P31689 397 aaKnown RBP7.02□□□□□ -1.29
CD44-215ENST00000525241 OXCT1P55809 520 aa7.02□□□□□ -1.29
CD44-215ENST00000525241 INTS3Q68E01 1043 aaKnown RBP7.02□□□□□ -1.29
CD44-215ENST00000525241 RUFY4Q6ZNE9 571 aa7.02□□□□□ -1.29
CD44-215ENST00000525241 MCF2L2Q86YR7 1114 aa7.02□□□□□ -1.29
CD44-215ENST00000525241 FAM181AQ8N9Y4 354 aa7.02□□□□□ -1.29
CD44-215ENST00000525241 CRBNQ96SW2 442 aa7.02□□□□□ -1.29
CD44-215ENST00000525241 SLC9A7Q96T83 725 aa7.02□□□□□ -1.29
CD44-215ENST00000525241 PRDM5Q9NQX1 630 aaPredicted RBP7.02□□□□□ -1.29
CD44-215ENST00000525241 STRIP2Q9ULQ0 834 aa7.02□□□□□ -1.29
CD44-215ENST00000525241 TPX2Q9ULW0 747 aaKnown RBP7.02□□□□□ -1.29
CD44-215ENST00000525241 MAPK8IP1Q9UQF2 711 aa7.02□□□□□ -1.29
CD44-215ENST00000525241 SFRP5Q5T4F7 317 aa7.01□□□□□ -1.29
CD44-215ENST00000525241 ZNF746Q6NUN9 644 aaPredicted RBP7.01□□□□□ -1.29
CD44-215ENST00000525241 TAB3Q8N5C8 712 aaPredicted RBP7.01□□□□□ -1.29
CD44-215ENST00000525241 CPLX3Q8WVH0 158 aa7.01□□□□□ -1.29
CD44-215ENST00000525241 TM9SF2Q99805 663 aa7.01□□□□□ -1.29
CD44-215ENST00000525241 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.01□□□□□ -1.29
CD44-215ENST00000525241 MKNK2Q9HBH9 465 aa7.01□□□□□ -1.29
CD44-215ENST00000525241 ZC3H7BQ9UGR2 993 aaKnown RBP7.01□□□□□ -1.29
CD44-215ENST00000525241 PRR33A8MZF0 331 aa7□□□□□ -1.29
CD44-215ENST00000525241 COBLO75128 1261 aa7□□□□□ -1.29
CD44-215ENST00000525241 GBP1P32455 592 aa7□□□□□ -1.29
CD44-215ENST00000525241 CCNFP41002 786 aa7□□□□□ -1.29
CD44-215ENST00000525241 ETV3P41162 512 aa7□□□□□ -1.29
CD44-215ENST00000525241 CD97P48960 835 aa7□□□□□ -1.29
CD44-215ENST00000525241 MSMPQ1L6U9 139 aa7□□□□□ -1.29
CD44-215ENST00000525241 INTS5Q6P9B9 1019 aaKnown RBP7□□□□□ -1.29
CD44-215ENST00000525241 C22orf34Q6ZV56 151 aa7□□□□□ -1.29
CD44-215ENST00000525241 FAM169BQ8N8A8 192 aa7□□□□□ -1.29
CD44-215ENST00000525241 OR6P1Q8NGX9 317 aa7□□□□□ -1.29
CD44-215ENST00000525241 VWCEQ96DN2 955 aa7□□□□□ -1.29
CD44-215ENST00000525241 PLAGL2Q9UPG8 496 aa7□□□□□ -1.29
CD44-215ENST00000525241 ZNF865P0CJ78 1059 aaPredicted RBP6.99□□□□□ -1.29
CD44-215ENST00000525241 CYP7A1P22680 504 aa6.99□□□□□ -1.29
CD44-215ENST00000525241 GUCY2CP25092 1073 aa6.99□□□□□ -1.29
CD44-215ENST00000525241 GRIK1P39086 918 aa6.99□□□□□ -1.29
CD44-215ENST00000525241 ZMYM1Q5SVZ6 1142 aa6.99□□□□□ -1.29
CD44-215ENST00000525241 TMEM192Q8IY95 271 aa6.99□□□□□ -1.29
CD44-215ENST00000525241 COX4I2Q96KJ9 171 aa6.99□□□□□ -1.29
CD44-215ENST00000525241 KREMEN1Q96MU8 473 aa6.99□□□□□ -1.29
CD44-215ENST00000525241 CBX7O95931 251 aa6.98□□□□□ -1.29
CD44-215ENST00000525241 SSBP05455 408 aaKnown RBP eCLIP6.98□□□□□ -1.29
CD44-215ENST00000525241 CEACAM5P06731 702 aa6.98□□□□□ -1.29
CD44-215ENST00000525241 SSTR4P31391 388 aa6.98□□□□□ -1.29
CD44-215ENST00000525241 ZYXQ15942 572 aaKnown RBP6.98□□□□□ -1.29
CD44-215ENST00000525241 NKPD1Q17RQ9 610 aa6.98□□□□□ -1.29
CD44-215ENST00000525241 PLD6Q8N2A8 252 aaKnown RBP6.98□□□□□ -1.29
CD44-215ENST00000525241 RNF141Q8WVD5 230 aa6.98□□□□□ -1.29
CD44-215ENST00000525241 ANAPC16Q96DE5 110 aa6.98□□□□□ -1.29
CD44-215ENST00000525241 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.98□□□□□ -1.29
CD44-215ENST00000525241 MRVI1Q9Y6F6 885 aa6.98□□□□□ -1.29
CD44-215ENST00000525241 GNAT3A8MTJ3 354 aa6.97□□□□□ -1.29
CD44-215ENST00000525241 KIAA1324LA8MWY0 1029 aaPredicted RBP6.97□□□□□ -1.29
CD44-215ENST00000525241 ITIH2P19823 946 aa6.97□□□□□ -1.29
CD44-215ENST00000525241 ETFBP38117 255 aa6.97□□□□□ -1.29
CD44-215ENST00000525241 KIR3DL1P43629 444 aa6.97□□□□□ -1.29
CD44-215ENST00000525241 CASP7P55210 303 aa6.97□□□□□ -1.29
CD44-215ENST00000525241 UNC5AQ6ZN44 842 aa6.97□□□□□ -1.29
CD44-215ENST00000525241 SPACA3Q8IXA5 215 aa6.97□□□□□ -1.29
CD44-215ENST00000525241 C19orf47Q8N9M1 422 aaKnown RBP6.97□□□□□ -1.29
CD44-215ENST00000525241 NETO1Q8TDF5 533 aa6.97□□□□□ -1.29
CD44-215ENST00000525241 Q96M66 194 aa6.97□□□□□ -1.29
CD44-215ENST00000525241 FBXL18Q96ME1 805 aa6.97□□□□□ -1.29
CD44-215ENST00000525241 TNKS2Q9H2K2 1166 aa6.97□□□□□ -1.29
CD44-215ENST00000525241 CAPN6Q9Y6Q1 641 aa6.97□□□□□ -1.29
CD44-215ENST00000525241 A0A1W2PQH9 124 aa6.96□□□□□ -1.3
CD44-215ENST00000525241 FAM86C2PA6NEL3 165 aa6.96□□□□□ -1.3
CD44-215ENST00000525241 LRRN2O75325 713 aa6.96□□□□□ -1.3
CD44-215ENST00000525241 SPINK2P20155 84 aa6.96□□□□□ -1.3
CD44-215ENST00000525241 NBPF12Q5TAG4 269 aaPredicted RBP6.96□□□□□ -1.3
CD44-215ENST00000525241 ARHGAP27Q6ZUM4 889 aa6.96□□□□□ -1.3
CD44-215ENST00000525241 TTC6Q86TZ1 520 aa6.96□□□□□ -1.3
CD44-215ENST00000525241 DTX1Q86Y01 620 aa6.96□□□□□ -1.3
CD44-215ENST00000525241 MFSD4AQ8N468 514 aa6.96□□□□□ -1.3
CD44-215ENST00000525241 SLC6A18Q96N87 628 aa6.96□□□□□ -1.3
CD44-215ENST00000525241 ASPNQ9BXN1 380 aa6.96□□□□□ -1.3
CD44-215ENST00000525241 ZNF408Q9H9D4 720 aa6.96□□□□□ -1.3
CD44-215ENST00000525241 LTBP3Q9NS15 1303 aa6.96□□□□□ -1.3
CD44-215ENST00000525241 SMAD7O15105 426 aaKnown RBP6.95□□□□□ -1.3
CD44-215ENST00000525241 CLEC3AO75596 197 aa6.95□□□□□ -1.3
CD44-215ENST00000525241 TNK2Q07912 1038 aa6.95□□□□□ -1.3
CD44-215ENST00000525241 IFI16Q16666 785 aaKnown RBP6.95□□□□□ -1.3
CD44-215ENST00000525241 TANGO6Q9C0B7 1094 aa6.95□□□□□ -1.3
CD44-215ENST00000525241 BSDC1Q9NW68 430 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms